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Galen Shipman
da7df6d257 monitor bproc node state and terminate the job if a node in our job goes
down.. 

This commit was SVN r11109.
2006-08-03 05:29:49 +00:00
Josh Hursey
d1e1a68645 This commit contains the necessary changes to get "mpirun a.out" working
correctly with MPI_Comm_spawn.

The problem wiht MPI_Comm_spawn was that the 'parent' process was 
rmgr.create'ing and then rmgr.launch'ing the children via the rmgr proxy
component. The HNP saw these commands and processed them normally, but
since we never went through the HNP's rmgr (urm component) spawn() 
logic the triggers and key/value pairs were never created. So the
children were launched correctly, but since the HNP did not
have any triggers setup, never triggered the xcast for the
children to finish orte_init().

This fix puts the trigger and key/value pair initialization in 
rmgr_urm_spawn() for the 'mpirun a.out' case, *and* in the 
rmgr_base_unpack routine that deals with the creation of the
job for the child as requested by the proxy component. This
will allow the triggers to be registered for the proxy's request
which only happens during MPI_Comm_spawn*

Small change for a lot of debugging. Notice that his reverts r11037
to its previous version, and adds a newline to handle the spawn
cases.

This commit was SVN r11046.

The following SVN revision numbers were found above:
  r11037 --> open-mpi/ompi@5813fb7d2a
2006-07-28 17:17:31 +00:00
Josh Hursey
5813fb7d2a It seems that MPI_Comm_spawn{_multiple} has been broken since r10708
By reverting this file (changeset from commit r10708) to its previous
version fixes the problem.

This should be moved to the v1.1 branch where it is also broken.

This commit was SVN r11037.

The following SVN revision numbers were found above:
  r10708 --> open-mpi/ompi@febc143d8c
2006-07-27 21:21:10 +00:00
Brian Barrett
c744f650ba * really didn't mean for this patch (the threaded accept() code) to come in with
r10841, so revert it (and it's fixes) out.  Will bring back once cleaned up from
  the code used in the tbird experiment

This commit was SVN r10991.

The following SVN revision numbers were found above:
  r10841 --> open-mpi/ompi@dfa1221c3b
2006-07-25 22:32:01 +00:00
Jeff Squyres
c2d4dfce78 Remove unused variable
This commit was SVN r10985.
2006-07-25 21:43:21 +00:00
Jeff Squyres
bdab8d744c Send a pointer to the data, not the data itself. Otherwise, we could
get a segv in some cases.

This commit was SVN r10984.
2006-07-25 21:42:44 +00:00
Ralph Castain
65acc9325a Fix a bug that crept in during the last change to support "mpirun a.out" operations. Since we now reserve a range of vpids for each app_context, we no longer need to track the rank and offset the starting vpid each time through the mapper - the name service automatically accounts for the offset when allocating the next starting vpid for the job.
This should be shifted to v1.1.

This commit was SVN r10916.
2006-07-20 21:06:15 +00:00
Ralph Castain
8bec270f90 Fix a bug noted by Jeff - we were no longer accurately recording in the registry that a process had been terminated when the user initiated the "kill" process (via cntrl-c).
Added another system-level test function for ORTE that just spins until terminated by a ctrl-c signal.

Modified orterun - added a couple of newlines to the output when abnormally terminating so the prompt always is on a new line.

This commit was SVN r10866.
2006-07-18 14:42:27 +00:00
Gleb Natapov
f15fc4ef2f include signal.h for SIGPIPE definition
This commit was SVN r10863.
2006-07-18 09:07:53 +00:00
Brian Barrett
2185c059e8 * use opal_free_list_item_t as the type of items stored in an opal_free_list_t,
rather than assuing it's an opal_list_item_t.

This commit was SVN r10860.
2006-07-17 21:51:50 +00:00
Jeff Squyres
82161d20ca Catch a SIGPIPE and allow it to be harmless. Register a no-op SIGPIPE
handler before the write() and de-register it afterwards.  Determine
if the write() succeeded or failed by the return of write().

This commit was SVN r10858.
2006-07-17 21:15:56 +00:00
George Bosilca
33a7634009 Silence the compiler.
This commit was SVN r10851.
2006-07-17 17:13:28 +00:00
Ralph Castain
404acc9f65 It's okay to call index prior to anything being put in the registry...
This commit was SVN r10848.
2006-07-17 14:31:42 +00:00
Ralph Castain
574a6f7896 Fix a bug that caused the system to crash when asked for an index of the segment names. Such a request required passing a NULL value for the segment name, but the find_seg function didn't protect itself from that value.
Thanks to James Kennedy (UCC-Ireland) for finding it.

This commit was SVN r10847.
2006-07-17 13:51:07 +00:00
Brian Barrett
dfa1221c3b * AC_CONFIG_LINKS has a minor problem in that it always uses ln -s, rather
than $(LN_S).  This causes problems with with Windows and probably
  elsewhere (re: #200).  So use a slightly different trick to get the
  right header selected for the MEMCPY and TIMER components.

* Using the same trick used to solve the AC_CONFIG_LINKS problem, 
  stop using a separate header file for direct calling in the
  PML and MTL.  This lets me remove some icky code in ompi_mca.m4
  that was more fragile than I really liked.

This commit was SVN r10841.
2006-07-16 04:23:52 +00:00
Jeff Squyres
ffddfc5629 Turns out that it's a really Bad Idea(tm) to tm_spawn() and then not
keep the resulting tm_event_t that is generated because the back-end
TM library actually caches a bunch of stuff on it for internal
processing, and doesn't let go of it until tm_poll().

tm_event_t's are similar to (but slightly different than)
MPI_Requests: you can't do a million MPI_Isend()'s on a single
MPI_Request -- a) you need an array of MPI_Request's to fill and b)
you need to keep them around until all the requests have completed.

This commit was SVN r10820.
2006-07-14 22:04:41 +00:00
Rainer Keller
50b5791969 - Release best_item
- Reformat

This commit was SVN r10814.
2006-07-14 19:55:14 +00:00
Ralph Castain
7b3ced80e8 Fix a bug that has been causing inconsistent behavior on a number of platforms. Will explain more on the core-devel list.
Jeff: this needs to be back-patched to our supported prior releases. I'll try to verify how far back we need to go - my initial guess is probably all of them

This commit was SVN r10801.
2006-07-14 14:16:20 +00:00
Ralph Castain
cef1ce19d6 Restore the "sleep" delay during startup.
Since Jeff and I are going to a branch for T-bird, we have restored the trunk to its prior state to avoid any possibility of disturbing it.

This commit was SVN r10774.
2006-07-12 22:18:53 +00:00
Jeff Squyres
ef8433a60b After more discussion on the phone, it seems easier to not muck around
in special components but rather go down to a /tmp branch.  So
removing these components and I'll branch next.

This commit was SVN r10771.
2006-07-12 22:12:29 +00:00
Jeff Squyres
62c189ea1c Fix a few blanket search/replaces
This commit was SVN r10768.
2006-07-12 21:54:05 +00:00
Ralph Castain
badd3f4acb Clean up a few lingering references to "urm".
This commit was SVN r10765.
2006-07-12 21:01:21 +00:00
Jeff Squyres
36ca7497d1 Update m4 and configure files
This commit was SVN r10764.
2006-07-12 20:55:39 +00:00
Ralph Castain
9102b5af3b Remove the "sleep" delay in the oob connection procedure. This shouldn't cause any problems, especially for launches of less than 1000 processes.
Please report any abnormal behavior during launch, though, as we would like to understand what (if any) impact is seen. I couldn't see any on small jobs (the modulo functions render this number down pretty low).

This commit was SVN r10763.
2006-07-12 20:31:30 +00:00
Ralph Castain
a84898316c Create new components to support Thunderbird scalability development
This commit was SVN r10762.
2006-07-12 20:28:23 +00:00
Brian Barrett
4b70bb92db * Per ticket #112, localhost checks should check against 127.0.0.1/8, rather
than just 127.0.0.1.

This commit was SVN r10750.
2006-07-11 20:54:49 +00:00
Ralph Castain
11125dd67a George has a retarded compiler - but that's okay. This will quiet it's warning system.
This commit was SVN r10736.
2006-07-11 15:27:02 +00:00
George Bosilca
3daa063772 Make the format and the arguments matchs.
This commit was SVN r10734.
2006-07-11 15:10:44 +00:00
Josh Hursey
9a31060b6d Fix r10725 so that the trunk builds again.
This commit was SVN r10733.

The following SVN revision numbers were found above:
  r10725 --> open-mpi/ompi@ae222cca5b
2006-07-11 14:48:31 +00:00
Ralph Castain
ae222cca5b Include the help file so it can be accessed
This commit was SVN r10725.
2006-07-11 12:15:25 +00:00
Ralph Castain
6129a5a887 Enable -host support for "mpirun a.out". You can now execute on all slots on specified nodes within your overall allocation.
This commit was SVN r10713.
2006-07-11 02:59:23 +00:00
George Bosilca
a9df5035f9 Remove unused variable.
This commit was SVN r10712.
2006-07-11 00:30:51 +00:00
Ralph Castain
febc143d8c Per LANL's stated need, add functionality that runs a.out across ALL available process slots if no num_proc is specified on the command line. However, please note the following limitation: we ONLY allow ONE application to be specified on the command line when this feature is invoked. If multiple apps are specified, the user MUST also specify the number to be launched for each and every one of them.
Update the help text to report errors when not following that rule.

Also updated the RMAPS help text to reflect the reorganization of some of the round-robin code into the base.

The new functionality has been tested under Mac OS-X and on Odin using an MPI program. Both byslot and bynode mapping have been checked and verified. Operational support for other systems needs to be verified - I respectfully request people's help in doing so.

This commit was SVN r10708.
2006-07-10 21:25:33 +00:00
Ralph Castain
3d220cbd48 This patch fixes several issues relating to comm_spawn and N1GE. In particular, it does the following:
1. Modifies the RAS framework so it correctly stores and retrieves the actual slots in use, not just those that were allocated. Although the RAS node structure had storage for the number of slots in use, it turned out that the base function for storing and retrieving that information ignored what was in the field and simply set it equal to the number of slots allocated. This has now been fixed.

2. Modified the RMAPS framework so it updates the registry with the actual number of slots used by the mapping. Note that daemons are still NOT counted in this process as daemons are NOT mapped at this time. This will be fixed in 2.0, but will not be addressed in 1.x.

3. Added a new MCA parameter "rmaps_base_no_oversubscribe" that tells the system not to oversubscribe nodes even if the underlying environment permits it. The default is to oversubscribe if needed and the underlying environment permits it. I'm sure someone may argue "why would a user do that?", but it turns out that (looking ahead to dynamic resource reservations) sometimes users won't know how many nodes or slots they've been given in advance - this just allows them to say "hey, I'd rather not run if I didn't get enough".

4. Reorganizes the RMAPS framework to more easily support multiple components. A lot of the logic in the round_robin mapper was very valuable to any component - this has been moved to the base so others can take advantage of it.

5. Added a new test program "hello_nodename" - just does "hello_world" but also prints out the name of the node it is on.

6. Made the orte_ras_node_t object a full ORTE data type so it can more easily be copied, packed, etc. This proved helpful for the RMAPS code reorganization and might be of use elsewhere too.

This commit was SVN r10697.
2006-07-10 14:10:21 +00:00
Brian Barrett
41e144c879 Fix for ticket #92, bproc stdin being borked. The problem was that we were
using a pty for everything, which drops all buffered data on the floor when
close() is called on the daemon side, meaning EOF has some issues.  Instead,
do the same thing we do for other starters that use the fork() pls -- use
a pipe/fifo for stdin and stderr and a pty for stdout.  This is good enough
for what we need and avoids most of the issues with ptys.

This commit was SVN r10692.
2006-07-08 21:18:24 +00:00
Ralph Castain
bc7690bcb0 Fix the bproc allocator. This is just a bandaid for 1.x that will be fixed more thoroughly in 2.0.
Basically, the problem was that the allocator was grabbing everything on the cluster for which the user had access privilege. Thus, if a user had two sessions operable, each with its own allocation, mpirun in each session would grab both sets of nodes and use them. Not very polite.

This commit was SVN r10683.
2006-07-06 18:31:14 +00:00
Jeff Squyres
3d5d0959fa Remove unused variable, and therefore silence a compiler warning.
This commit was SVN r10673.
2006-07-06 10:44:04 +00:00
Josh Hursey
b1da6f8bc4 A bit more cleanup for that last patch.
* num_children should really be an int instead of size_t
  since 'size_t' is not signed and num_children can (in rare cases)
  drop below 0, and don't want it to roll around to MAX_INT or some
  such.

 * I figured out that this problem only happened to me because I use
  the pls_fork_reap_timeout MCA parameter and thus the only time that
  the code in pls_fork_module.c to waitpid is executed is if this is
  not set to 0 (I had it set to 1 to give my procs time to exit). I
  adjusted the loop from while{...} to do{...}while; so that it is
  executed at least once for consistency.

 * de-register the SIGCHILD callback for the pid before we attempt
  to kill it, so that we don't leave the door open for both the
  waitpids (the one in the callback, and the one in this function)
  to race to see who can wait on the child.

 * Move the 'thread release' to outside the for loop for a bit of an
  optimization, and always set the value to 0 since we want to 
  finish after this function.

 * Added a help message for the case when we can't send a kill()
   signal to the process. Should never happen, but all is possible
   in the wild wild west of HPC.

This commit was SVN r10666.
2006-07-05 21:38:23 +00:00
Josh Hursey
696bb4a0c0 A partial fix for the hanging orted bugs (Ticket #177)
When we force an application to terminate (via CTRL-C to mpirun)
we send an out-of-band message to the orted to reap its children.
the fork PLS was doing an internal waitpid but never releasing or
updating the information and signaling the condition variable. So
the fork PLS callback for SIGCHLD registered with the event library
and this waitpid are in a bit of a race to 'waitpid' for the children.
Since the PLS callback was the only one that handled the signal properly
when it 'won' then things were great -- as in the normal termination case.
But when it 'lost' -- as in the abnormal termination case -- the orted
never received the proper signal that its children had gone away.

We want to preserve the internal fork PLS callback since it allows
for a timeout while waiting for the child, which the event library
won't do.

This allows both to exist, and behave properly.

This was introduced in r9068.

The ticket is still open since the orted's hang in other situations
still. This is a fix for one of the causes.

This commit was SVN r10662.

The following SVN revision numbers were found above:
  r9068 --> open-mpi/ompi@c2c2daa966
2006-07-05 19:37:29 +00:00
Jeff Squyres
538965aeb0 Final merge of stuff from /tmp/tm-stuff tree (merged through
/tmp/tm-merge).  Validated by RHC.  Summary:

- Add --nolocal (and -nolocal) options to orterun
- Make some scalability improvements to the tm pls

This commit was SVN r10651.
2006-07-04 20:12:35 +00:00
Josh Hursey
5c5ce7e051 When 'mca_oob_send_callback' accesses the callback 'orte_pls_rsh_terminate_job_cb'
with an error status (< 0) then the req buffer is NULL. Put checks around the
OBJ_RELEASE(req) calls so that we don't try to release NULL :/

This commit was SVN r10641.
2006-07-03 22:44:54 +00:00
Josh Hursey
d082a63734 Add some new OPAL functionality.
After seeing the uglyness that is removing directories in the
codebase I decided to push down this to the OPAL by extending the
opal/os_create_dirpath.(c|h) to contain some more functionality.

In this process I renamed 'os_create_dirpath' to 'os_dirpath' since it
is a bit more general now.

Added a few functions to:
 - check if an directory is empty
 - check to see if the access permissions are set correctly
 - destroy the directory at the end of the dirpath
   - By using a caller callback function (a la Perl, I believe)
     for every file, the caller can have fine grained control over
     whether a specific file is deleted or not.

This simplifies things a bit for orte_session_dir_(finalize|cleanup)
as it should no longer contain any of this functionality, but uses
these functions to do the work.

From the external perspective nothing has changed, from the 
developer point of view we have some cleaner, more generic code.

This commit was SVN r10640.
2006-07-03 22:23:07 +00:00
Brian Barrett
0bd5acc51f * Fix for bus error in XGrid starter
This commit was SVN r10615.
2006-07-01 16:16:46 +00:00
Josh Hursey
0a931f9fad Brining over the session directory and universe changes
from the tmp/jjhursey-ft-cr branch.

In this commit we change the way universe names are created.
Before we by default first created "default-universe" then
if there was a conflict we created "default-universe-PID"
where PID is the PID of the HNP.
Now we create "default-universe-PID" all the time (when
a default universe name is used). This makes it much 
easier when trying to find a HNP from an outside app 
(e.g. orte-ps, orteconsole, ...)

This also adds a "search" function to find all of the 
universes on the machine. This is useful in many contexts
when trying to find a persistent daemon or when trying to 
connect to a HNP.

This commit also makes orte_universe_t an opal_object_t, 
which is something that needed to happen, and only effected
the SDS in one of it's base functions.


I was asked to bring this over to aid in fixing orteconsole
and orteprobe. Due to the change of orte_universe_t to 
an object orteprobe may need to be updated to reflect this 
change. Since orteprobe needs to be looked at anyway I'll
leave this to Ralph to take care of.

*Note*:
These changes do not depend upon any of the FT work (but
the FT work does depend upon them). These were brought over
to help in fixing some of the ORTE tool set that require
the functionality layed out in this patch.

Testing:
Ran the 'ibm' tests before and after this change, and all was
as well as before the change. If anyone notices additional
irregularities in the system let me know. But none are expected.

This commit was SVN r10550.
2006-06-28 21:03:31 +00:00
Brian Barrett
2cf73912e2 * fix for signal forwarding additions in bproc_orted code
This commit was SVN r10529.
2006-06-27 19:59:07 +00:00
Sushant Sharma
76926756d0 variable ntid not being assigned any value was resulting in errors
This commit was SVN r10480.
2006-06-22 18:00:54 +00:00
Josh Hursey
58110f9fc9 Fixes Ticket #125 for both the trunk and v1.1 branch.
This commit will apply cleanly to the v1.1 branch, and should
be moved over once I get someone to verify it.

The problem is outlined in the bug. The fix was to move the
setting of the app context index (idx) before we put it in the
GPR so that it is propogated to the gpr.

The reason this hasn't bitten us before is because we init
app->idx to 0, which is true most of the time. Except that is
when MPI_Comm_spawn_multiple in which we put in more than 
one app context, thus care about correct indexing.

This was causing down the line memory corruption by overrunning
the mapping array. This commit also puts in a check to make 
sure that we error out if we ever try to do that again.

This commit was SVN r10380.
2006-06-15 22:14:07 +00:00
Sushant Sharma
ca01291aea Updated soh-xcpu component. Not going to be used for time being.
This commit was SVN r10343.
2006-06-13 23:25:46 +00:00
Sushant Sharma
b5a16b6515 Updated xcpu launcher. open-mpi no longer needs xcpu library. Launcher code is now moved within xcpu.
This commit was SVN r10342.
2006-06-13 23:21:56 +00:00
Brian Barrett
17a8ccef89 * update XGrid API to match recent signal changes
This commit was SVN r10262.
2006-06-08 21:15:35 +00:00