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Граф коммитов

489 Коммитов

Автор SHA1 Сообщение Дата
Ralph H Castain
fc81d0d519 Replace asprintf with opal_asprintf
Silence the flood of warnings from ORTE

Signed-off-by: Ralph H Castain <rhc@open-mpi.org>
2018-10-06 19:32:37 +00:00
Ralph Castain
45f23ca5c9 Update mapping system
Correctly transfer job-level mapping directives for dynamically spawned
jobs to the mapping system.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-26 10:00:09 -07:00
Ralph Castain
466cad6cb2 Update master to PMIx v4
Retain ext3x for PMIx 3  compatibility
Get the blasted permissions correct on config files

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-13 08:24:17 -07:00
Ralph Castain
7f1444d5f9 Allow run-as-root if 2 envars are set
Per suggestion by @bangerth, allow mpirun to execute as root if two
envars are set to specific values

Per conversation with @jsquyres, name the envars OMPI_ALLOW_RUN_AS_ROOT
and OMPI_ALLOW_RUN_AS_ROOT_CONFIRM

Fixes #4451

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-08-24 18:12:51 -07:00
Ralph Castain
5cfa2a7fca Complete integration of job_control
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-08-20 16:10:50 -07:00
Ralph Castain
747253ba00 Protect against infinite loops
Flag that we provided a notification and ignore it if it attempts to come back up.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit ea0d70bc9396def61545e2ce492a55c4c3aa7772)
2018-07-19 13:56:30 -07:00
Ralph Castain
3b2390e5d5 Silence coverity warnings, remove/ignore build product
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-25 08:01:28 -07:00
Ralph Castain
97665d44cd Prevent thread log when show_help msgs are emitted
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-19 21:07:03 -07:00
Ralph Castain
cdb3d798f0 Silence Coverity warnings
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-19 07:47:50 -07:00
Ralph Castain
f0a0d606a0 Correct accounting for tools
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 1be080f7b92bad39745f42628a8cb6afefad2d2a)
2018-06-18 13:24:25 -07:00
Ralph Castain
fa18ba395d Sync to latest PMIx v3.0rc
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-17 02:41:46 -07:00
Jeff Squyres
af4299ebc5 hwloc: updates for hwloc 2.0.x API
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-05-24 11:53:07 +02:00
Joshua Hursey
ccb4f43c9b Fix MPIR_proctable structure visibility
* The `MPIR_PROCDESC` structure needs to be visible even in optimized
   builds so that debuggers can attach to `mpirun` and properly read the
   `MPIR_proctable`.
 * In the v2.0.x and v2.x series this structure resided in the `orterun`
   directory and included the `CFLAGS` fix included here. This code
   moved in the v3.x series and the `CFLAGS` did not move causing this
   issue.
   - Instead of applying the debug `CFLAGS` globally to libopen-rte,
     only apply them to the `orted_submit.c` compile which contains the
     MPIR symbols.

Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
2018-03-09 21:15:28 -05:00
Ralph Castain
2f85db9791 Always register the nspace for jobs
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-03-02 02:00:31 -08:00
Ralph Castain
17c40f4cea Implement support for proctable queries
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-03-02 02:00:31 -08:00
Ralph Castain
0434b615b5 Update ORTE to support PMIx v3
This is a point-in-time update that includes support for several new PMIx features, mostly focused on debuggers and "instant on":

* initial prototype support for PMIx-based debuggers. For the moment, this is restricted to using the DVM. Supports direct launch of apps under debugger control, and indirect launch using prun as the intermediate launcher. Includes ability for debuggers to control the environment of both the launcher and the spawned app procs. Work continues on completing support for indirect launch

* IO forwarding for tools. Output of apps launched under tool control is directed to the tool and output there - includes support for XML formatting and output to files. Stdin can be forwarded from the tool to apps, but this hasn't been implemented in ORTE yet.

* Fabric integration for "instant on". Enable collection of network "blobs" to be delivered to network libraries on compute nodes prior to local proc spawn. Infrastructure is in place - implementation will come later.

* Harvesting and forwarding of envars. Enable network plugins to harvest envars and include them in the launch msg for setting the environment prior to local proc spawn. Currently, only OmniPath is supported. PMIx MCA params control which envars are included, and also allows envars to be excluded.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-03-02 02:00:31 -08:00
Gilles Gouaillardet
02b97146de orted_submit: fix the --oversubscribe option
do set the ORTE_MAPPING_SUBSCRIBE_GIVEN directive when --oversubscribe is used

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-02-20 17:15:12 +09:00
Gilles Gouaillardet
dd24c746dc output-filename: cleanup obsolete code.
Since output-filename has been moved to a per-job attribute,
remove the orte_output_filename global variable, and stop passing
this option to orted.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-02-15 10:40:44 +09:00
Ralph Castain
f5c3239290 Ensure that output-filename is passed as an absolute path
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-02-13 07:28:42 -08:00
Ralph Castain
cb221b6f6f Correct mapping errors
Since we now support the dynamic addition of hosts to the orte_node_pool, there is no longer any reason to require advanced specification of all possible nodes. Instead, use a precedence method to initially allocate only those hosts that were specified in the cmd line:

* rankfile, if given, as that will specify the nodes

* -host, aggregated across all app_contexts

* -hostfile, aggregated across all app_contexts

* default hostfile

* assign local node

Fix slots_inuse accounting so that the nodes are correctly reset upon error termination - e.g., when oversubscribed without permission.

Ensure we accurately track the user's specified desires for oversubscribe and no-use-local when dynamically spawning jobs.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit c9b3e68ce596a68a2ed2fbf73f211b3334b0a6a8)
2018-02-07 11:29:21 -08:00
Ralph Castain
9fe8153d38 Sync to IOF branch and continue fix of request for job info from unknown nspace
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 02400d30d79ce3c7e7e28f9a08f7062a5b6f4c51)
2018-02-03 19:56:35 -08:00
Ralph Castain
e9cd7fd7e6 Update orte
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-25 08:53:43 -08:00
Ralph Castain
4cd7f3b202 Convert nidmap to regx framework
Handle the need for different regex generator/parsers by moving the
orte/util/nidmap and orte/util/regex code into a new "regx" framework.
Use the original code to complete a "fwd" component, and create a
scaffold for IBM's "reverse" component.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-10 20:28:21 -08:00
Gilles Gouaillardet
03da5218ea orte: remove some dead code related to the new tree_spawn method
Now that the daemon calls remote_spawn itself, there is no longer
a need for the "tree_spawn" command nor the associated command
processing code since the HNP is no longer sending a tree-spawn
message to the orted.

Thanks Ralph for the guidance !

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-04 09:35:17 +09:00
Gilles Gouaillardet
4527584840 orted: fix tree-spawn when the node regex is too long
When the node regex is too long to be sent on the command line,
retrieve  it first from the parent, and then spawn the remote orted

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-04 09:33:46 +09:00
Ralph Castain
db8ebd33ad Fix the optnone attribute, add extension attribute
See how the various compilers handle these

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-12-18 19:18:53 -08:00
Ralph Castain
7a58f91ab9 Fix the tree-spawn-with-rollup
Somehow, the code for passing a daemon's parent was accidentally removed, thus breaking the tree-spawn callback sequence and causing all daemons to phone directly home. Note that this is noticeably slower than no-tree-spawn for small clusters where directly ssh launch of the child daemons from the HNP doesn't overload the available file descriptors.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-12-15 16:03:43 -08:00
Ralph Castain
5c4185abd8 Add the __optnone__ attribute to help avoid optimizing out MPIR_Breakpoint
Thanks to @kiranchandramohan for the suggestion

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-12-14 13:14:21 -08:00
Ralph Castain
9c84e1485b Some minor cleanups of the DVM
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-11-12 16:27:37 -08:00
Ralph Castain
a63904d47f Updates to support cross-version operations with OMPI v2.x
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-10-22 08:38:33 -07:00
Ralph Castain
6ffb0d0507 Ensure that the pmix server system-level rendezvous file is only output by the HNP as (at least for slurm on cray) a daemon could be colocated with the HNP and overwrite the file. Update the scaling.pl script to only use the system-level rendezvous so it doesn't get rejected by a colocated daemon
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-10-14 10:16:49 -07:00
Ralph Castain
d5ce3c38e1 Begin cleaning up debugger support
Debugger daemons do not count against available slots. Clean up some leftover errors from the upgrade to HWLOC 2 in the mappers. Properly flag debugger jobs that come in via PMIx.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-09-27 16:18:43 -05:00
Ralph Castain
fe9b584c05 Fully support OMPI spawn options. Fix a bug in the round-robin mappers where we weren't adding nodes to the job map node array, and so resources were not released
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 285d8cfef74ffc899e9c51e1d9c597b7fb2ceb89)
2017-09-21 10:29:27 -07:00
Ralph Castain
5708872112 Implement support for "local" range when publishing data
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 2d54f7e0dd3a47260b0b2634aae3361316005933)
2017-09-18 19:34:08 -07:00
Ralph Castain
3c914a7a97 Complete the fix of the ORTE DVM. We will now use "prun" instead of "orterun -hnp foo" to execute jobs. This provides the feature of automatic discovery of the orte-dvm so you don't need to manually enter URI's or contact file locations. All IO is forwarded to prun.
Still in the "needs to be done" category:

* mapping/ranking/binding options aren't correctly supported

* if the DVM encounters some errors (e.g., not enough resources for the job), the resulting error is globally set and impacts any subsequent job submission

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-09-16 13:13:07 -07:00
Ralph Castain
7c7d8a69a0 Backport changes from PMIx reference server
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-09-14 11:48:56 -07:00
Ralph Castain
3477079804 Repair the ORTE DVM
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-09-11 17:38:21 -07:00
Joshua Hursey
420ca65f4f orte/pmix: Always seed environment with global rank
* Even if we are only launching one app context, we might call spawn
   later and the remote groups might want their global rank information.

Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
2017-09-08 08:53:49 -05:00
Ralph Castain
68029b27e4 Fix the orte-dvm operations so that orterun can connect and execute an application. There is a lingering problem, though. The first invocation of orterun succeeds every time. However, subsequent invocations have a high probability of hanging in the OOB connection handshake.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-08-23 17:31:08 -07:00
Ralph Castain
d80b0c7990 If the HWLOC shared memory system is unable to connect, then fallback to providing the topology via XML. Do not automatically provide the XML to every process as that defeats the purpose of the shared memory system. Instead, use PMIx_Query_info_nb to get the info from the server when required.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-08-22 18:12:26 -07:00
Ralph Castain
d85239e052 Cleanup some issues in connect/accept support across jobs started by different mpirun commands. Still not fully operational, but someone else will have to finish debugging it
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-08-17 11:58:48 -07:00
Ralph Castain
65fb6070d9 Update tool support by adding MCA params to direct orted's to drop
session and/or system-level tool rendezous files. Ensure PMIx is
enabled for tools

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-08-15 17:49:47 -07:00
Ralph Castain
edccb258cb Provide the mapping, ranking, binding patterns
Apps might want to make use of the relative patterns used to place/assign their procs

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-08-09 11:34:43 -07:00
Ralph Castain
a239b4c3c3 Per discussion on the PMIx side, do a better job of detecting mismatches between location directives for OPAL and PMIx. Provide a more helpful error message and error out if we find a mismatch. If any OPAL values are set and the PMIx equivalent is not, then transfer it.
Do not clear PMIX_INSTALL_PREFIX from the daemon's launch environment

Fixes #3980
Closes #4007
Refs #3985

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-08-04 19:36:00 -07:00
Ralph Castain
0042c758f1 Update the tools support so it allows tools to access PMIx
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-25 17:10:08 -07:00
Ralph Castain
af85e48dd7 Silence Coverity warning, silence pmix_error_log of success
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-21 15:33:16 -07:00
Ralph Castain
b225366012 Bring the ofi/rml component online by completing the wireup protocol for the daemons. Cleanup the current confusion over how connection info gets created and
passed to make it all flow thru the opal/pmix "put/get" operations. Update the PMIx code to latest master to pickup some required behaviors.

Remove the no-longer-required get_contact_info and set_contact_info from the RML layer.

Add an MCA param to allow the ofi/rml component to route messages if desired. This is mainly for experimentation at this point as we aren't sure if routing wi
ll be beneficial at large scales. Leave it "off" by default.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-20 21:01:57 -07:00
Artem Polyakov
79c10c884d orte/pmix/server: Fix direct modex response with error status
`send_error()` is only packing status and peer info in the reply.
While remote counterpart in `pmix_server_dmdx_resp()` expects
the "hotel room number" to proceed correctly.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2017-07-20 23:50:57 +07:00
Gilles Gouaillardet
60aa9cfcb6 hwloc: add support for hwloc v2 API
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-20 17:39:44 +09:00
Gilles Gouaillardet
9f29f3bff4 hwloc: since WHOLE_SYSTEM is no more used, remove useless
checks related to offline and disallowed elements

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-20 17:39:21 +09:00