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Граф коммитов

5816 Коммитов

Автор SHA1 Сообщение Дата
Ralph H Castain
fc81d0d519 Replace asprintf with opal_asprintf
Silence the flood of warnings from ORTE

Signed-off-by: Ralph H Castain <rhc@open-mpi.org>
2018-10-06 19:32:37 +00:00
Ralph H Castain
51acbf738e Fix map-by node for comm_spawn
Do not reorder the available host list as this causes the head node process assignment to differ from those computed on the other nodes

Signed-off-by: Ralph H Castain <rhc@open-mpi.org>
2018-10-06 15:58:45 +00:00
Ralph Castain
44afb59a01
Merge pull request #5838 from rhc54/topic/ev
Correctly notify upon process failure
2018-10-04 04:56:05 -07:00
Ralph Castain
86702b71bc Correctly notify upon process failure
We only need to pass a custom range if the target is a single process.
Otherwise, we let the range be "session".

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-03 20:19:42 -07:00
Ralph Castain
57f6b94fa5 Cleanup race condition in finalize
See https://github.com/open-mpi/ompi/issues/5798#issuecomment-426545893
for a lengthy explanation

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-03 09:42:59 -07:00
Ralph Castain
cfdd08d309 Remove stale ORTE code
Functionality moved to PMIx

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-02 11:55:36 -07:00
Jeff Squyres
6bb356ab87 Squash a bunch of harmless compiler warnings.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-09-26 12:15:21 -07:00
Ralph Castain
45f23ca5c9 Update mapping system
Correctly transfer job-level mapping directives for dynamically spawned
jobs to the mapping system.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-26 10:00:09 -07:00
Jeff Squyres
3970b06134 misc: passing a bool to va_start() is undefined
According to clang on MacOS, passing a bool parameter -- which
undergoes default parameter promotion -- to va_start() results in
undefined behavior.  So just change these params to int and avoid the
issue.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-09-15 06:04:13 -07:00
Nathan Hjelm
1071d72130
Merge pull request #5445 from hjelmn/asm_type
Update opal to use C11 atomics if available
2018-09-14 12:32:56 -06:00
Nathan Hjelm
fe6528b0d5 opal/atomic: always use C11 atomics if available
This commit disables the use of both the builtin and hand-written
atomics if proper C11 atomic support is detected. This is the first
step towards requiring the availability of C11 atomics for the C
compiler used to build Open MPI.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-09-14 10:51:05 -06:00
Ralph Castain
7facb3f3e9 Pickup and deploy network-specific envars
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-13 09:24:19 -07:00
Ralph Castain
f18954d2d5 Update ORTE to allocate network resources
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-13 08:54:39 -07:00
Ralph Castain
466cad6cb2 Update master to PMIx v4
Retain ext3x for PMIx 3  compatibility
Get the blasted permissions correct on config files

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-13 08:24:17 -07:00
Gilles Gouaillardet
893270caee orte: send error messages to stderr.
When a job terminates normally but with a non zero exit code,
display the error message to stderr.

Thanks Emre Brookes for the bug report.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-09-12 17:03:55 +09:00
Ralph Castain
bc1d13ffbe Remove the orte_enable_instant_on MCA param
We have adequate protection to ensure that we only utilize the PMIx
features related to "instant on" when they are available, so this param
is no longer required and causes confusion.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-10 09:20:26 -07:00
Gilles Gouaillardet
d234caef74 ess/hnp: plug a memory leak in rte_finalize()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-08-30 10:07:17 +09:00
Nathan Hjelm
98172163e6 odls/alps: resolve hang when launching with mpirun on Crays
This commit removes some code that protected the odls/alps component
from closing alps file descriptors. For some unknown reason leaving
these file descriptors open causes can cause an orted to hang when
launching apps.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-28 16:24:56 -06:00
Artem Polyakov
00d12c058f
Merge pull request #5596 from karasevb/fix_hwloc_numa_obj
Fixed the NUMA obj detection for hwloc ver >= 2.0.0
2018-08-27 22:15:41 -07:00
Boris Karasev
beb0697f24 Fixed copyrights of prev commit.
Signed-off-by: Boris Karasev <karasev.b@gmail.com>
2018-08-27 09:50:11 +03:00
Ralph Castain
8d1be27a1e Deal with special case during cleanup
In some scenarios, we can have a daemon sharing the node with mpirun. In
those cases, we need to avoid race conditions in cleanup

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-08-25 07:45:28 -07:00
Ralph Castain
7f1444d5f9 Allow run-as-root if 2 envars are set
Per suggestion by @bangerth, allow mpirun to execute as root if two
envars are set to specific values

Per conversation with @jsquyres, name the envars OMPI_ALLOW_RUN_AS_ROOT
and OMPI_ALLOW_RUN_AS_ROOT_CONFIRM

Fixes #4451

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-08-24 18:12:51 -07:00
Boris Karasev
e5291ccc34 Fixed the NUMA obj detection for hwloc ver >= 2.0.0
Since version hwloc 2.0.0 has a new organization of NUMA nodes on the
topology tree. This commit adds the detection of local NUMA object for
hwloc => 2.0.0, which fixes the procs bindings policy for rmaps mindist
component.

Signed-off-by: Boris Karasev <karasev.b@gmail.com>
2018-08-24 19:11:52 +03:00
Jeff Squyres
fe0852bcb4 Miscellaneous compiler warning stomps.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-08-24 07:39:14 -07:00
Nathan Hjelm
1c84f48640 config: remove OPAL_ENABLE_MULTI_THREADS config macro
We long ago hard-coded this value to 1. This commit cleans it out
entirely.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-23 13:47:02 -06:00
Ralph Castain
5cfa2a7fca Complete integration of job_control
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-08-20 16:10:50 -07:00
Boris Karasev
57683366ca pmix: added check for pmix fence status
Signed-off-by: Boris Karasev <karasev.b@gmail.com>
2018-08-06 15:01:57 +06:00
Nathan Hjelm
551133fd1a orte/runtime: always set opal_using_threads for orted/mpirun
Both orted and mpirun use threads to speed up local process spawing.
In order to avoid data corruption when calling the opal_output
interface we need to ensure that opal_using_threads is set to true.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-01 08:53:22 -06:00
Ralph Castain
bcdb1f45ac Fix the multiple pe/proc option
Things got a little out of whack and we weren't actually processing the map-by modifiers, plus an error crept into the display of the binding report. So clean those up.

Thanks to @tonyreina for the error report

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-07-25 18:47:39 -07:00
Ralph Castain
747253ba00 Protect against infinite loops
Flag that we provided a notification and ignore it if it attempts to come back up.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit ea0d70bc9396def61545e2ce492a55c4c3aa7772)
2018-07-19 13:56:30 -07:00
Ralph Castain
6b6e63a346 Control inheritance of launch directives by child jobs
Do not have child jobs inherit launch directives unless requested to do so. This affects the map-by, rank-by, bind-to, npernode, pernode, npersocket, persocket, and cpus-per-rank directives. Values provided in the spawn call always take precedence - if a particular value isn't specified, then the ORTE defaults will be used if inheritance is not requested, and the values specified by MCA param will be used if inheritance is set.

Always inherit oversubscribe for now as otherwise MTT will break

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-07-10 15:12:05 -07:00
Ralph Castain
c6ee8d2f5c
Merge pull request #5300 from hjelmn/goodbye_oobud
oob/ud: remove as it has bitrotted
2018-07-09 12:40:04 -07:00
Ralph Castain
0ddbc75ce5
Merge pull request #4930 from kizill/fix-ipv6
fixed ipv6 OOB connection problems (fix issue #1585)
2018-06-26 09:13:53 -07:00
Ralph Castain
3b2390e5d5 Silence coverity warnings, remove/ignore build product
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-25 08:01:28 -07:00
Jeff Squyres
4603852740 orterun: use consistent CLI option name for --bind-to
Since the new binding option is tied to the --cpu-list orterun CLI
option, make the --bind-to option reflect the same name (vs. the
--cpu-set CLI option, which is entirely different).  For example:

    mpirun --bind-to cpu-list:ordered ...

Note that "--bind-to cpulist:ordered" is accepted as a synonym,
because people will be lazy.

Also add some minor updates to the orterun.1in man page for
clarification.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-06-21 08:22:00 -07:00
Ralph Castain
d2838139e4 Update man and help output for new binding option
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-21 06:36:11 -07:00
Ralph Castain
f17d47087a Define a new binding method and qualifier
Allow users to request that procs be bound to a cpu in a given cpu-list based on their corresponding local rank

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-20 21:26:09 -07:00
Ralph Castain
97665d44cd Prevent thread log when show_help msgs are emitted
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-19 21:07:03 -07:00
Ralph Castain
98b4ed9a3a Fix the no-disconnect test
A race condition exists based on whether or not the userdata object attached to a hwloc_obj_t has been initialized. These objects are setup whenever we scan for resources under that location. You therefore must not set a variable to the pointer to the userdata object and then call a function that will initialize the data in it - you need to set the variable after the function call, and protect against a NULL pointer

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-19 13:52:34 -07:00
Nathan Hjelm
845516ca11 oob/ud: remove as it has bitrotted
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-06-19 13:06:26 -06:00
Ralph Castain
cdb3d798f0 Silence Coverity warnings
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-19 07:47:50 -07:00
Ralph Castain
f0a0d606a0 Correct accounting for tools
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 1be080f7b92bad39745f42628a8cb6afefad2d2a)
2018-06-18 13:24:25 -07:00
Ralph Castain
795140e590 Make use of "instant-on" feature optional
The PMIx support for "instant on" remains experimental, so disable it by default. Provide an MCA param and corresponding command line option to enable it at runtime.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-17 02:42:00 -07:00
Ralph Castain
fa18ba395d Sync to latest PMIx v3.0rc
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-17 02:41:46 -07:00
Ralph Castain
ea21f7175a Silence warnings and remove unused code
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-16 17:42:48 -07:00
Ralph Castain
06eb51161f Rename prun ompi-prun
This is a minor abstraction break in naming, but hopefully acceptable for now. I will update the contents of the program a little later. This resolves the immediate issue of naming conflict with the PRRTE binary.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-06 07:40:03 -07:00
Ralph Castain
7c0ec7e851 Cleanup warnings in binding code
This still leaves two unresolved warnings:

base/rmaps_base_binding.c:577:22: warning: variable ‘clvm’ set but not used [-Wunused-but-set-variable]
     unsigned clvl=0, clvm=0;
                      ^~~~
base/rmaps_base_binding.c:576:27: warning: variable ‘hwm’ set but not used [-Wunused-but-set-variable]
     hwloc_obj_type_t hwb, hwm;
                           ^~~

The problem is that these values are used in the OPAL_HWLOC_MAKE_OBJ_CACHE macro to form a variable name. Thus, the compiler doesn't recognize the values as being "used". I'm not entirely sure how to resolve it cleanly.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-03 11:47:14 -07:00
Brice Goglin
c4dffa1d0f rmaps: simplify the lookup for the binding object and fix for hwloc 2.0
Don't bother doing a lookup upwards or downwards for the target object type.
Just use the target depth, iterate over the level until we find the min_bound
object that intersects the locale cpuset.

Signed-off-by: Brice Goglin <Brice.Goglin@inria.fr>
2018-05-24 11:53:07 +02:00
Brice Goglin
bd08a6ead9 hwloc: fix hwloc/shmem.h in the external case
Signed-off-by: Brice Goglin <Brice.Goglin@inria.fr>
2018-05-24 11:53:07 +02:00
Jeff Squyres
af4299ebc5 hwloc: updates for hwloc 2.0.x API
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-05-24 11:53:07 +02:00