This commit fixes some bugs uncovered during thread testing of
2.0.1rc1. With these fixes the component is running cleanly with
threads.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This commit changes the sematics of ompi request callbacks. If a
request's callback has freed or re-posted (using start) a request
the callback must return 1 instead of OMPI_SUCCESS. This indicates
to ompi_request_complete that the request should not be modified
further. This fixes a race condition in osc/pt2pt that could lead
to the req_state being inconsistent if a request is freed between
the callback and setting the request as complete.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Before this commit, a same PML tag may be used for distinct
communications for long messages. For example, consider a condition
where rank A calls ```MPI_PUT``` targeting rank B and rank B calls
```MPI_GET``` targeting rank A simultaneously.
A PML tag for the ```MPI_PUT``` is acquired on rank A and is used
for the long-message communication from rank A to rank B.
A PML tag for the ```MPI_GET``` is acquired on rank B and is used
for the long-message communication from rank A to rank B.
These two tags may become a same value because they are managed
independently on each rank. This will cause a data corruption.
This commit separates the tag used in a single RMA communication
call, one for communication from an origin to a target, and one
for communication from a target to an origin. A "base" tag
is acquired using ```get_tag``` function and PML tag is caluculated
from the base tag by ```tag_to_target``` and ```tag_to_origin```
function.
This commit fixes several bugs identified by @ggouaillardet and MTT:
- Fix SEGV in long send completion caused by missing update to the
request callback data.
- Add an MPI_Barrier to the fence short-cut. This fixes potential
semantic issues where messages may be received before fence is
reached.
- Ensure fragments are flushed when using request-based RMA. This
allows MPI_Test/MPI_Wait/etc to work as expected.
- Restore the tag space back to 16-bits. It was intended that the
space be expanded to 32-bits but the required change to the
fragment headers was not committed. The tag space may be expanded
in a later commit.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This commit fixes several bugs identified by a new multi-threaded RMA
benchmarking suite. The following bugs have been identified and fixed:
- The code that signaled the actual start of an access epoch changed
the eager_send_active flag on a synchronization object without
holding the object's lock. This could cause another thread waiting
on eager sends to block indefinitely because the entirety of
ompi_osc_pt2pt_sync_expected could exectute between the check of
eager_send_active and the conditon wait of
ompi_osc_pt2pt_sync_wait.
- The bookkeeping of fragments could get screwed up when performing
long put/accumulate operations from different threads. This was
caused by the fragment flush code at the end of both put and
accumulate. This code was put in place to avoid sending a large
number of unexpected messages to a peer. To fix the bookkeeping
issue we now 1) wait for eager sends to be active before stating
any large isend's, and 2) keep track of the number of large isends
associated with a fragment. If the number of large isends reaches
32 the active fragment is flushed.
- Use atomics to update the large receive/send tag counters. This
prevents duplicate tags from being used. The tag space has also
been updated to use the entire 16-bits of the tag space.
These changes should also fixopen-mpi/ompi#1299.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Fixed CID 1269712, 1269709, 1269706, 1269703, 1269694: Logically dead code
Remove extra NULL check as OMPI_OSC_PT2PT_REQUEST_ALLOC can never set the
request to NULL.
Fixes CID 1269668: Unchecked return value
False positive. Add (void) to indicate we do not care about the return code
from opal_hash_table_get_uint32.
Fixes CID 1324726: Free of address-of expression
Do not free lock if it was not allocated.
Fixes CID 1269658: Free of address-of expression
Never will happen but because op is always a built-in op there is no
reason to retain/release it anyway.
Signed-off-by: Nathan Hjelm <hjelmn@me.com>
This commit updates osc/pt2pt to allocate peer object as they are
needed rather than all at once. Additionally, to help improve the
memory footprint a new synchronization structure has been added.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
- MPI_Compare_and_swap
- MPI_Fetch_and_op
- MPI_Raccumulate
- MPI_Win_detach
Thanks to Michael Knobloch and Takahiro Kawashima for bringing this
to our attention
operations, not ints.
Sorry for the mid-day configure.ac change, folks...
This commit was SVN r23449.
The following Trac tickets were found above:
Ticket 2472 --> https://svn.open-mpi.org/trac/ompi/ticket/2472
OMPI
and a language agnostic part in OPAL. The convertor is completely
moved into OPAL. This offers several benefits as described in RFC
http://www.open-mpi.org/community/lists/devel/2009/07/6387.php
namely:
- Fewer basic types (int* and float* types, boolean and wchar
- Fixing naming scheme to ompi-nomenclature.
- Usability outside of the ompi-layer.
- Due to the fixed nature of simple opal types, their information is
completely
known at compile time and therefore constified
- With fewer datatypes (22), the actual sizes of bit-field types may be
reduced
from 64 to 32 bits, allowing reorganizing the opal_datatype
structure, eliminating holes and keeping data required in convertor
(upon send/recv) in one cacheline...
This has implications to the convertor-datastructure and other parts
of the code.
- Several performance tests have been run, the netpipe latency does not
change with
this patch on Linux/x86-64 on the smoky cluster.
- Extensive tests have been done to verify correctness (no new
regressions) using:
1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and
ompi-ddt:
a. running both trunk and ompi-ddt resulted in no differences
(except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run
correctly).
b. with --enable-memchecker and running under valgrind (one buglet
when run with static found in test-suite, commited)
2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt:
all passed (except for the dynamic/ tests failed!! as trunk/MTT)
3. compilation and usage of HDF5 tests on Jaguar using PGI and
PathScale compilers.
4. compilation and usage on Scicortex.
- Please note, that for the heterogeneous case, (-m32 compiled
binaries/ompi), neither
ompi-trunk, nor ompi-ddt branch would successfully launch.
This commit was SVN r21641.
In case we use memcmp, strlen, strup and friends include <string.h>
Also several constants.h are not included directly
- Let's have mca_topo_base_cart_create return ompi-errors in
ompi/mca/topo/base/topo_base_cart_create.c
This commit was SVN r20773.
tell if the remote proc should be in an exposure epoch or not.
Refs trac:325
This commit was SVN r11746.
The following Trac tickets were found above:
Ticket 325 --> https://svn.open-mpi.org/trac/ompi/ticket/325
implemented entirely on top of the PML. This allows us to have a
one-sided interface even when we are using the CM PML and MTLs for
point-to-point transport (and therefore not using the BML/BTLs)
* Old pt2pt component was renamed "rdma", as it will soon be having
real RDMA support added to it.
Work was done in a temporary branch. Commit is the result of the
merge command:
svn merge -r10862:11099 https://svn.open-mpi.org/svn/ompi/tmp/bwb-osc-pt2pt
This commit was SVN r11100.
The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
r10862
r11099
default
* Add ability to start Put and Get requests immediately instead of queuing
until synchronizaion when using Fence. Not entirely sure this is
completely safe, so it must be explicitly enabled by the user, either with
an MCA parameter or info argument to Win_create.
This commit was SVN r9418.
you can't be in a post and a start at the same time, and that is clearly
legal to do
* Fix interptretation of when the epochs start for MPI_Fence. Only start
an epoch if communication actually occurs, otherwise it isn't actually
an epoch. I don't know who thought that wording in the MPI standard
was a good idea, but can't change it now...
This commit was SVN r9139.
MPI-2:6.3.4 says about reduction operations
* Have the point-to-point one-sided component spew a warning and return
an error if a non-predefined datatype is used with an MPI_OP other
than MPI_REPLACE. Yes, this violates the MPI standard, but it's the
best we can do until George and I implement support for figuring out
where all the locations to update are..
This commit was SVN r9134.
* rework the thread locking so that it at least makes sense to me. Still
need to do a bunch of testing before I'm happy with it, but it's a tad
bit closer...
This commit was SVN r8918.
complete, but stable enough that it will have no impact on general development,
so into the trunk it goes. Changes in this commit include:
- Remove the --with option for disabling MPI-2 onesided support. It
complicated code, and has no real reason for existing
- add a framework osc (OneSided Communication) for encapsulating
all the MPI-2 onesided functionality
- Modify the MPI interface functions for the MPI-2 onesided chapter
to properly call the underlying framework and do the required
error checking
- Created an osc component pt2pt, which is layered over the BML/BTL
for communication (although it also uses the PML for long message
transfers). Currently, all support functions, all communication
functions (Put, Get, Accumulate), and the Fence synchronization
function are implemented. The PWSC active synchronization
functions and Lock/Unlock passive synchronization functions are
still not implemented
This commit was SVN r8836.
