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Граф коммитов

1139 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
6c1a140e99 Per request from Nathan, add a "commit" API to the opal db framework. This allows him to aggregate keys to work around the Cray's severe PMI limitations
This commit was SVN r28917.
2013-07-22 22:57:16 +00:00
Jeff Squyres
49b5342130 After talking with Nathan, update some comments/documentation about
the new MCA var and pvar systems.

This commit was SVN r28913.
2013-07-22 20:34:42 +00:00
Nathan Hjelm
61d331d5b5 MCA/base: fix some warnings and an error in the MCA variable system
This commit was SVN r28909.
2013-07-22 17:52:39 +00:00
Brian Barrett
0d8b57211a add missing include
This commit was SVN r28900.
2013-07-21 20:18:17 +00:00
Nathan Hjelm
1e8ba2b8cf fix condition in common/pmi init that c caused pmi to fail if PMI2_Init succeeds
This commit was SVN r28856.
2013-07-19 02:43:42 +00:00
Ralph Castain
4eb0dfa039 This has apparently been wrong for some time! Fix the common/pmi libraries so we build them dynamic so they can be properly linked into the components that use them. Define required library version numbers and so some other cuteness to make it all work.
cmr:v1.7.3:reviewer=jsquyres

This commit was SVN r28842.
2013-07-18 18:42:42 +00:00
Ralph Castain
92c6b806b9 Based on a patch submitted by Piotr Lesnicki of Bull, cleanup the PMI2 support. This has not been tested yet on multiple environments (e.g., Cray), so it needs more evaluation prior to moving to the 1.7 branch.
cmr:v1.7.3:reviewer=rhc

This commit was SVN r28837.
2013-07-18 14:46:07 +00:00
Nathan Hjelm
b88509af36 don't close components that failed to register. cmr:v1.7:reviewer=rhc
This commit was SVN r28823.
2013-07-17 19:49:05 +00:00
Nathan Hjelm
d446675526 MCA: Per-RFC, add support for performance variables
This commit adds an API for registering and querying performance
variables (mca_base_pvar) in the MCA base. The existing MCA variable
system API has been updated to reflect the new API: MCA variable
groups have performance variables, and new types have been added (double,
unsigned long long) to reflect what is required by the MPI_T
interface. Additionally, the MCA variable group code has been split
into its own set of files: mca_base_var_group.[ch].

Details of the new API can be found in doxygen comments in the header:
mca_base_pvar.h.

Other changes to the variable system:

 - Use an opal_hash_table to speed up variable/group lookup.

 - Clean up code associated with MCA variable types.

 - Registered performance variables are printed by ompi_info -a. In the
   future an option should be added to control this behavior.

Changes to OMPI:

 - Added full support for the MPI_T performance variable interface.

This commit was SVN r28800.
2013-07-16 16:02:13 +00:00
Jeff Squyres
14424daf4c Remove auto-generated file
This commit was SVN r28784.
2013-07-13 20:55:09 +00:00
Nathan Hjelm
8f9b7926ec mca/base: fix component selection negation. cmr:v1.7:reviewer=jsquyres
This commit was SVN r28770.
2013-07-12 17:55:20 +00:00
Ralph Castain
b001d31c27 Per RFC, remove libevent 2.0.19 and leave 2.0.21 as the default
This commit was SVN r28767.
2013-07-12 16:37:15 +00:00
Jeff Squyres
9252afdcd9 Updates and tweaks to the documentation of the new MCA parameter
system (written in conjunction with Nathan).

This commit was SVN r28758.
2013-07-11 20:04:51 +00:00
Nathan Hjelm
a694bcb6b6 Add support for the MCA variable information level to ompi_info.
Add an option to ompi_info (-l, --level) that takes a number in the
interval (1,9). Only MCA variables up to this level will be printed.
The default level is 1.

Print the level as part of both the parsable and readable output.

This commit was SVN r28750.
2013-07-10 18:52:36 +00:00
Ralph Castain
028f5ee7a6 Cleanup some bitrot from moving the db framework to opal and from the new mca param system
This commit was SVN r28741.
2013-07-09 14:37:08 +00:00
Ralph Castain
315da8125d Remove stale headers
cmr:v1.7.3:reviewer=jsquyres

This commit was SVN r28732.
2013-07-08 18:26:58 +00:00
Ralph Castain
eac174e624 For purposes of testing the RFC, make libevent2021 the default for now so it gets tested by MTT
This commit was SVN r28730.
2013-07-05 23:14:22 +00:00
Brian Barrett
ea9cee73c1 Per RFC, remove darwin backtrace, since OS X since 10.5 has supported the
execinfo() interface (which has been the default for OMPI to use on Darwin)

This commit was SVN r28727.
2013-07-05 19:06:27 +00:00
Ralph Castain
21c8041a40 Update libevent 2021 component so it also only warns once when detecting reentrant behavior
This commit was SVN r28721.
2013-07-04 04:41:04 +00:00
Ralph Castain
45fad1ddcc We really should be closing the event framework when told to do so.
cmr:v1.7.3,reviewer=jsquyres

This commit was SVN r28714.
2013-07-03 16:57:14 +00:00
Ralph Castain
9166a8cc95 Per telecon today, add a flag so we only warn once about reentrant libevent loops - this will allow developers to better diagnose the problem as we won't swamp filesystems with warning messages.
This commit was SVN r28712.
2013-07-03 04:51:36 +00:00
Jeff Squyres
ad16bcd6d1 Followup from Justin Bronder: Looks like I spoke too soon. The
sandbox team has informed me that they are getting rid of SANDBOX_PID
in the future and that using SANDBOX_ON would be preferred.

This commit was SVN r28708.
2013-07-03 01:38:26 +00:00
Jeff Squyres
fea15ec34e Add memory hooks override for Gentoo sandbox v2.5, too. Thanks to
Justin Bronder for the patch.

This commit was SVN r28702.
2013-07-02 12:34:51 +00:00
Ralph Castain
446e33a5d8 There are cases where we want to use the novm state machine, but the backend node topology differs from that where mpirun is executing. In those cases, we can wind up thinking we are oversubscribed because the head node has fewer cores than the compute nodes.
To resolve this situation, add the ability to specify a backend topology file that mpirun shall use for its mapping operations. Create a new "set_topology" function in opal hwloc to support it.

This commit was SVN r28682.
2013-06-27 03:04:50 +00:00
Jeff Squyres
dd25421d48 Convert strcpy() to strncpy(), and just to be extra-super paranoid,
use memset(0) for extra bonus points.

This commit was SVN r28668.
2013-06-22 12:21:18 +00:00
Joshua Ladd
0b5c1f2ea8 Add 'generic' support for PMI2 (previously, we checked for PMI2 only on Cray systems.) If your resource manager (e.g. SLURM) has support for PMI2, then the --with-pmi configure flag will enable its usage. If you don't have PMI2, then you will fallback to regular old PMI1. This patch was submitted by Ralph Castain and reviewed and pushed by Josh Ladd. This should be added to cmr:v1.7:reviewer=jladd
This commit was SVN r28666.
2013-06-21 15:28:14 +00:00
Nathan Hjelm
518d1fe200 Fix two typos that prevented alps direct launch from working
This commit was SVN r28628.
2013-06-13 17:04:08 +00:00
Joshua Ladd
46362d2761 Stomps compiler warnings in HCA min-dist calculation. This should be added to cmr:v1.7:reviewer=jladd
This commit was SVN r28620.
2013-06-12 16:25:25 +00:00
Tom Naughton
d86c3ce669 + remove autogenerated 'install-sh'
This commit was SVN r28602.
2013-06-07 20:40:24 +00:00
Jeff Squyres
6d173af329 This commit introduces a new "mindist" ORTE RMAPS mapper, as well as
some relevant updates/new functionality in the opal/mca/hwloc and
orte/mca/rmaps bases.  This work was mainly developed by Mellanox,
with a bunch of advice from Ralph Castain, and some minor advice from
Brice Goglin and Jeff Squyres.

Even though this is mainly Mellanox's work, Jeff is committing only
for logistical reasons (he holds the hg+svn combo tree, and can
therefore commit it directly back to SVN).

-----

Implemented distance-based mapping algorithm as a new "mindist"
component in the rmaps framework.  It allows mapping processes by NUMA
due to PCI locality information as reported by the BIOS - from the
closest to device to furthest.

To use this algorithm, specify:

   {{{mpirun --map-by dist:<device_name>}}}

where <device_name> can be mlx5_0, ib0, etc.

There are two modes provided:

 1. bynode: load-balancing across nodes
 1. byslot: go through slots sequentially (i.e., the first nodes are
     more loaded)

These options are regulated by the optional ''span'' modifier; the
command line parameter looks like:

    {{{mpirun --map-by dist:<device_name>,span}}}

So, for example, if there are 2 nodes, each with 8 cores, and we'd
like to run 10 processes, the mindist algorithm will place 8 processes
to the first node and 2 to the second by default. But if you want to
place 5 processes to each node, you can add a span modifier in your
command line to do that.

If there are two NUMA nodes on the node, each with 4 cores, and we run
6 processes, the mindist algorithm will try to find the NUMA closest
to the specified device, and if successful, it will place 4 processes
on that NUMA but leaving the remaining two to the next NUMA node.

You can also specify the number of cpus per MPI process. This option
is handled so that we map as many processes to the closest NUMA as we
can (number of available processors at the NUMA divided by number of
cpus per rank) and then go on with the next closest NUMA.

The default binding option for this mapping is bind-to-numa. It works
if you don't specify any binding policy. But if you specified binding
level that was "lower" than NUMA (i.e hwthread, core, socket) it would
bind to whatever level you specify.

This commit was SVN r28552.
2013-05-22 13:04:40 +00:00
Jeff Squyres
55382c1bf8 Bring over upstream hwloc trunk commit
https://svn.open-mpi.org/trac/hwloc/changeset/5592 to fix the merging
of groups when they are I/O objects.

This commit was SVN r28551.
2013-05-22 12:34:59 +00:00
Nathan Hjelm
721779d7ab Per RFC: remove old MCA parameter system.
This commit was SVN r28541.
2013-05-20 15:36:13 +00:00
Jeff Squyres
089c632cce Remove a bunch of dead code: gcc 4.7 warns of set-but-unused
variables.  So get rid of them.

This commit was SVN r28538.
2013-05-17 21:45:49 +00:00
Jeff Squyres
4d9da92e60 Fixes trac:376: bu default the wrappr compilers will enable rpath support
in generated executables on systems that support it.  Use
--disable-wrapper-rpath to disable this behavior.  See text in
README about --disable-wrapper-rpath for more details.

This commit was SVN r28479.

The following Trac tickets were found above:
  Ticket 376 --> https://svn.open-mpi.org/trac/ompi/ticket/376
2013-05-11 00:49:17 +00:00
Jeff Squyres
cad1d920b2 Check to ensure that we have struct ifreq.ifr_mtu before we try to use
it, because Solaris although has SIOCFIGMTU, it curiously does not
have ifreq.ifr_mtu.

This commit was SVN r28460.
2013-05-07 13:51:50 +00:00
Jeff Squyres
4b9b3a81ff Update the list of post-1.5.2 r numbers from hwloc that we have
committed here.

This commit was SVN r28458.
2013-05-07 01:22:06 +00:00
Jeff Squyres
ee0cdf86fd Fix issue raised by Stefan Friedel: remove an extraneous -L that is
added by hwloc's embedding so that it doesn't appear in
libhwloc_embedded.la (and therefore propogate all the way up to
libmpi.la). 

Committed upstream in hwloc SVN r5588.

This commit was SVN r28457.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r5588
2013-05-07 01:21:18 +00:00
Ralph Castain
527ea1d090 Per the RFC, always enable libevent thread support.
This commit was SVN r28443.
2013-05-03 15:39:05 +00:00
Ralph Castain
4c0dcb1aa2 Update ignores and remove build product
This commit was SVN r28412.
2013-04-29 19:02:03 +00:00
Ralph Castain
5d7a93c032 Add the ability to use an external version of libevent. Clearly not recommended at this time. I've verified that it works in limited scenarios, but more thorough testing and performance impacts need to be assessed.
Interesting how many includes had to be fixed here and there to fill in missing dependencies :-)

This commit was SVN r28411.
2013-04-29 17:02:37 +00:00
Ralph Castain
3052acd968 Fix minor typo
This commit was SVN r28410.
2013-04-29 17:02:11 +00:00
Ralph Castain
3818e88365 Remove and ignore build products
This commit was SVN r28404.
2013-04-27 00:07:18 +00:00
Ralph Castain
c081a520a3 Fix --without-hwloc
This commit was SVN r28396.
2013-04-25 19:13:56 +00:00
Nathan Hjelm
bccf8c657a Per RFC add initial support for the MPI 3.0 tools interface.
Current MPI_T support:
  - Full cvar interface.
  - Full categories interface.
  - No pvar support at this time.

This commit was SVN r28376.
2013-04-24 15:59:23 +00:00
Ralph Castain
d721437c8d Somebody (accidentally) removed the instructions for updating libevent releases in OMPI, so replace them with at least an outline on how to do it.
This commit was SVN r28349.
2013-04-22 17:05:56 +00:00
Ralph Castain
1dc65b5fd7 Update libevent to 2.0.21-stable, but currently ignore it for all but those testing it
This commit was SVN r28348.
2013-04-22 17:01:07 +00:00
Ralph Castain
6c6681e880 Fix an error in a test in the libevent configure.ac that we introduced - there are two brackets around the entire test code, so no need for double-brackets around the array indices within it
cmr:v1.7.2

This commit was SVN r28347.
2013-04-22 15:29:44 +00:00
Jeff Squyres
e88881c25f Also support getting the MAC and MTU.
This commit was SVN r28344.
2013-04-17 22:17:42 +00:00
Jeff Squyres
eb012c2aad Defensive programming: add a constructor for opal_if_t that zeros
everything out before using it.  

This is not in response to any known bug, but rather just a
pre-emptive, defensive move to help prevent bugs in code that forgets
to initialize a field.

This commit was SVN r28343.
2013-04-17 22:09:02 +00:00
Jeff Squyres
349ee654c1 Fix some --without-hwloc compile errors. Also remove one
assigned-but-not-used variable assignment.

This commit was SVN r28321.
2013-04-10 15:08:31 +00:00