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Граф коммитов

3354 Коммитов

Автор SHA1 Сообщение Дата
Aurelien Bouteiller
6acebc40a1
Handle error cases in TCP BTL
When an error is returned by the socket operations, trigger the
appropriate error path in the PML to give an opportunity for
rerouting/error handling.

Signed-off-by: Aurelien Bouteiller <bouteill@icl.utk.edu>
2018-08-14 15:35:24 -04:00
Ralph Castain
7241043809 Modify the internal logic for resolve nodes/peers
The current code path for PMIx_Resolve_peers and PMIx_Resolve_nodes executes a threadshift in the preg components themselves. This is done to ensure thread safety when called from the user level. However, it causes thread-stall when someone attempts to call the regex functions from _inside_ the PMIx code base should the call occur from within an event.

Accordingly, move the threadshift to the client-level functions and make the preg components just execute their algorithms. Create a new pnet/test component to verify that the prge code can be safely accessed - set that component to be selected only when the user directly specifies it. The new component will be used to validate various logical extensions during development, and can then be discarded.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 456ac7f7af3d9ba09888e3c899eb001daaa24aef)
2018-03-02 02:00:31 -08:00
Ralph Castain
17c40f4cea Implement support for proctable queries
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-03-02 02:00:31 -08:00
Ralph Castain
0434b615b5 Update ORTE to support PMIx v3
This is a point-in-time update that includes support for several new PMIx features, mostly focused on debuggers and "instant on":

* initial prototype support for PMIx-based debuggers. For the moment, this is restricted to using the DVM. Supports direct launch of apps under debugger control, and indirect launch using prun as the intermediate launcher. Includes ability for debuggers to control the environment of both the launcher and the spawned app procs. Work continues on completing support for indirect launch

* IO forwarding for tools. Output of apps launched under tool control is directed to the tool and output there - includes support for XML formatting and output to files. Stdin can be forwarded from the tool to apps, but this hasn't been implemented in ORTE yet.

* Fabric integration for "instant on". Enable collection of network "blobs" to be delivered to network libraries on compute nodes prior to local proc spawn. Infrastructure is in place - implementation will come later.

* Harvesting and forwarding of envars. Enable network plugins to harvest envars and include them in the launch msg for setting the environment prior to local proc spawn. Currently, only OmniPath is supported. PMIx MCA params control which envars are included, and also allows envars to be excluded.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-03-02 02:00:31 -08:00
Gilles Gouaillardet
9fedf2836e btl/vader: handle unexpected short read/write in process_vm_{read,write}v
Important note :

According to the man page
"On success, process_vm_readv() returns the number of bytes read and
process_vm_writev() returns the number of bytes written.  This return
value may be less than the total number of requested bytes, if a
partial read/write occurred.  (Partial transfers apply at the
granularity of iovec elements.  These system calls won't perform a
partial transfer that splits a single iovec element.)"

So since we use a single iovec element, the returned size should either
be 0 or size, and the do loop should not be needed here.
We tried on various Linux kernels with size > 2 GB, and surprisingly,
the returned value is always 0x7ffff000 (fwiw, it happens to be the size
of the larger number of pages that fits a signed 32 bits integer).
We do not know whether this is a bug from the kernel, the libc or even
the man page, but for the time being, we do as is process_vm_readv() could
return any value.

Thanks Heiko Bauke for the bug report.

Refs. open-mpi/ompi#4829

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-03-02 13:20:46 +09:00
Nathan Hjelm
5ed2fc2d48 mca/base: add support for additional variable types
This commit adds long, int32_t, uint32_t, int64_t, and uint64_t as
possible MCA variable types.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-03-01 20:42:27 -07:00
Nathan Hjelm
5380d7cce5 mpool/hugepage: add missing header
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-02-26 13:35:56 -07:00
Nathan Hjelm
38d9b10db8 rcache/base: update VMA tree to use opal_interval_tree_t
This commit replaces the current VMA tree implementation with one that
uses the new opal_interval_tree_t class. Since the VMA tree lock is no
longer used this commit also updates rcache/grdma and btl/vader to
take better care when searching for existing registrations.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-02-26 13:35:56 -07:00
Ralph Castain
60e6440603 Sync to PMIx master
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-02-19 09:20:13 -08:00
Jeff Squyres
b452991ad8 btl/usnic: missed a preprocessor check in d36648b
Missed updating one instance of `==` to `>=` in d36648b.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-02-19 07:03:05 -08:00
Jeff Squyres
d36648b547 btl/usnic: update BTL_VERSION handling
Follow-on to 8097d09858: now that BTL_VERSION is defined in btl.h, be
a little smarter about whether we define it or not.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-02-16 13:20:36 -08:00
Ralph Castain
8097d09858 Silence usnic warnings - BTL version has changed
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-02-16 10:00:18 -08:00
Nathan Hjelm
9aa21f4467
Merge pull request #4796 from hjelmn/btl_v3.1
opal/btl: add support for flushing RDMA/atomic operations
2018-02-15 12:44:18 -07:00
Nathan Hjelm
072a6a4850 opal/btl: add support for flushing RDMA/atomic operations
This commit adds a new optional function to the BTL module:
btl_flush. This function takes an optional BTL endpoint. When called
this function completes all outstanding RDMA and atomic operations
started prior to the call to btl_flush.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-02-13 12:49:51 -07:00
Ralph Castain
1a7dfd7d54 Sync to PMIx master
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-02-07 12:16:51 -08:00
Ralph Castain
9fe8153d38 Sync to IOF branch and continue fix of request for job info from unknown nspace
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 02400d30d79ce3c7e7e28f9a08f7062a5b6f4c51)
2018-02-03 19:56:35 -08:00
Howard Pritchard
1adf0873f7
Merge pull request #4766 from hppritcha/topic/squash_grdma_comp_warning
rcache/grdma: squash a compiler warning
2018-02-02 18:58:32 -07:00
Gilles Gouaillardet
43700faba1 pmix/ext3x: remove autogenerated ext3x.h header file
This header file was meant to be autogenerated, and for
some reasons, was never removed from the repository.
Update .gitignore as well

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-31 23:45:42 +09:00
Gilles Gouaillardet
8209fca842 pmix/ext3x: bring external component up-to-date with the embedded pmix3x
add the callback prototype for the upcoming PMIx_IOF_push() API

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-31 13:35:34 +09:00
Gilles Gouaillardet
0481277e93 pmix/ext3x: bring external component up-to-date with the embedded pmix3x
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-31 13:33:33 +09:00
Nathan Hjelm
bb212e0c94
Merge pull request #4767 from ggouaillardet/topic/vader_backing_file
btl/vader: make the backing file job specific
2018-01-30 21:27:02 -07:00
Gilles Gouaillardet
0285c63348 pmix/ext3x: generate component source when only static libraries are built
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-31 13:21:14 +09:00
Gilles Gouaillardet
611d7c2d27 btl/vader: make the backing file job specific
Since open-mpi/ompi@47fd2313ab
the backing file is now in /dev/shm by default. As a consequence,
the backing file name has to include the jobid so more than one job
can run at a time.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-30 16:52:51 +09:00
Howard Pritchard
c3cac6731f rcache/grdma: squash a compiler warning
tired of seeing this compiler warning

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2018-01-29 11:50:01 -07:00
Ralph Castain
a17df810ed Sync with PMIx iof rfc
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-25 10:51:38 -08:00
Ralph Castain
e9cd7fd7e6 Update orte
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-25 08:53:43 -08:00
Ralph Castain
9fb80bd239 Update the opal/pmix base framework elements
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-25 08:37:52 -08:00
Ralph Castain
187352eb3d Update the PMIx external components
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-25 08:35:57 -08:00
Ralph Castain
a5679ef000 Update the PMIx 3.x component
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-25 08:34:44 -08:00
Ralph Castain
6216225bda Ensure cleanup of registered files/dirs
Resolve a race condition between registering for a file to be removed upon termination and actual creation of that file by providing attributes that identify whether the path is a file or directory. This removes the need for PMIx to detect the difference.

Refs #4686

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-11 11:05:30 -08:00
Ralph Castain
6dacf40a8c Ensure the epilog gets executed in PMIx server
If we abnormally terminate, then we still want any cleanups to be
executed.

Remove debug

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-10 18:28:05 -08:00
Nathan Hjelm
39d598899b rcache/grdma: fix crash when part of a registration is unmapped
This commit fixes an issue when a registration is created for a large
region and then invalidated while part of it is in use.

References #4509

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-12-22 10:36:35 -07:00
Ralph Castain
d5471d7898 Silence warnings in optimized build
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-12-20 12:00:28 -08:00
Nathan Hjelm
47fd2313ab btl/vader: move backing files into /dev/shm on Linux
This commit moves the backing files to /dev/shm to avoid limitations
that may be set on /tmp. The files are registered with pmix to ensure
they are cleaned up after an erroneous exit.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
(cherry picked from commit 48101278160672317ade352365592f56ef3b8977)
2017-12-18 07:09:18 -08:00
Ralph Castain
07427c6d89 Update to PMIx v3.0 PR for cleanup registration
If available, have apps use registration capability to cleanup their session directories. Setup capability for vader to register its shared memory file location - let someone familiar with that code do so.

Final cleanup to track uid/gid, update the opal/pmix API to pass flags for ignore and leave top directory alone

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-12-18 06:53:11 -08:00
Nathan Hjelm
d3fa1bbbb0 rcache/grdma: try to prevent erroneous free error messages
It is possible to have parts of an in-use registered region be passed
to munmap or madvise. This does not necessarily mean the user has made
an error but does mean the entire region should be invalidated. This
commit checks that the munmap or madvise base matches the beginning of
the cached region. If it does and the region is in-use then we print
an error. There will certainly be false-negatives where a user
unmaps something that really is in-use but that is preferrable to a
false-positive.

References #4509

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-12-12 09:18:39 -07:00
Nathan Hjelm
a82f761a4a btl/vader: change the way fast boxes are used
There were multiple paths that could lead to a fast box
allocation. One of them made little sense (in-place send) so it has
been removed to allow a rework of the fast-box send function. This
should fix a number of issues with hanging/crashing when using the
vader btl.

References #4260

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-12-11 10:38:33 -07:00
Gilles Gouaillardet
11e5f86bf8 mpool/base: plug a memory leak
set the key of all mpool_tree_item objects, so they can be retrieved
in mpool_base_free and then returned back to the
mca_mpool_base_tree_item_free_list free list.

Refs. open-mpi/ompi#4567

Thanks Philip Blakely for the bug report.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-12-07 09:06:25 +09:00
Ben Menadue
90fa8af10b Use correct alignment request in mca_mpool_base_alloc.
Signed-off-by: Ben Menadue <ben.menadue@nci.org.au>
2017-12-06 07:02:17 +11:00
Ben Menadue
db3e25edad Update mca_mpool_base_alloc to use malloc instead of posix_memalign for alignment requests of <= sizeof(void *). This works around issue #4564.
Signed-off-by: Ben Menadue <ben.menadue@nci.org.au>
2017-12-05 09:51:31 +11:00
Matias Cabral
2c86b8723d
Merge pull request #4510 from matcabral/mtl_psm2_shadow_vars
New flag for MCA parameters that allows a behaving with a default value of "unset".
2017-12-04 12:25:37 -08:00
Nathan Hjelm
7893248c5a opal/asm: add fetch-and-op atomics
This commit adds support for fetch-and-op atomics. This is needed
because and and or are irreversible operations so there needs to be a
way to get the old value atomically. These are also the only semantics
supported by C11 (there is not atomic_op_fetch, just
atomic_fetch_op). The old op-and-fetch atomics have been defined in
terms of fetch-and-op.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-11-30 10:41:23 -07:00
Nathan Hjelm
1282e98a01 opal/asm: rename existing arithmetic atomic functions
This commit renames the arithmetic atomic operations in opal to
indicate that they return the new value not the old value. This naming
differentiates these routines from new functions that return the old
value.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-11-30 10:41:22 -07:00
Nathan Hjelm
9d0b3fe9f4 opal/asm: remove opal_atomic_bool_cmpset functions
This commit eliminates the old opal_atomic_bool_cmpset functions. They
have been replaced by the opal_atomic_compare_exchange_strong
functions.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-11-30 10:41:22 -07:00
Nathan Hjelm
647b40f3f2
Merge pull request #4442 from bosilca/topic/ob1_pvar
Topic/ob1 pvar
2017-11-29 09:31:07 -07:00
Gilles Gouaillardet
3b4b3bb6f9 pmix/ext3x: add a missing cnctcbfunc field to ext3x_opalcaddy_t
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-11-28 16:11:08 +09:00
Ralph Castain
3906aaf41a Silence warnings
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-11-25 11:50:18 -08:00
Ralph Castain
30f23ac67a Save one more file descriptor per process by not opening one for stddiag
if PMIx (version > 1.x) is active since all diagnostic messages will instead flow thru
the PMIx connection. Unfortunately, PMIx v1 does not support this
feature, but we can remove the stddiag support once PMIx v1 slides out
of the support window

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-11-25 11:48:53 -08:00
Matias A Cabral
1fad59465f New flag for MCA parameters that allows a behaving with a default value
of "unset".
mtl/psm2: Update some shadow mca parameters to use the default "unset".
mtl/psm2: Add new shadow parameter to allow specifying the service level.

Signed-off-by: Matias A Cabral <matias.a.cabral@intel.com>
2017-11-16 16:28:50 -08:00
Jeff Squyres
c19822dad4 pmix: pack pointer to object (vs. pointer to pointer)
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2017-11-13 09:50:44 -08:00