1
1
Граф коммитов

29141 Коммитов

Автор SHA1 Сообщение Дата
Geoffrey Paulsen
c23359911c Updating VERSION to rc1 and resetting mpifh_so_ver
Signed-off-by: Geoffrey Paulsen <gpaulsen@us.ibm.com>
2018-09-11 14:04:37 -05:00
Nathan Hjelm
1cc295e4c4 patcher/base: improve instruction cache flush for aarch64
This commit updates the patcher component to either use the
__clear_cache intrinsic or the correct assembly to flush the
instruction cache.

Fixes #5631

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
(cherry picked from commit 1cdbceb095)
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-09-10 15:44:50 -06:00
Geoff Paulsen
93bcace5f9
Merge pull request #5658 from hppritcha/topic/license_etc_for_v4.0.x
LICENSE: update license for v4.0.x
2018-09-10 14:35:22 -05:00
Howard Pritchard
d207052dbc LICENSE: update license for v4.0.x
update missing memkind changes for this release in NEWS

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2018-09-10 13:08:52 -06:00
Geoff Paulsen
17aab5ea5b
Merge pull request #5659 from ggouaillardet/topic/v4.0.x/misc_finalize_leaks
Plug misc leaks on MPI_Finalize()
2018-09-10 14:06:31 -05:00
Howard Pritchard
1dedade614
Merge pull request #5661 from kawashima-fj/pr/v4.0.x/pcollreq-zero-count
v4.0.x: mpiext/pcollreq: Fix zero-count reduction
2018-09-10 09:45:32 -06:00
Howard Pritchard
38171be7ac
Merge pull request #5656 from jsquyres/pr/v4.0.x/dont-let-openib-yell
v4.0.x: btl/openib: don't complain about no NICs
2018-09-10 09:39:22 -06:00
KAWASHIMA Takahiro
6858028596 mpiext/pcollreq: Fix zero-count reduction
We need to return a persistent request.
`ompi_request_empty` is not a persistent request.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>

(cherry picked from commit 69901a5156)
2018-09-10 13:11:59 +09:00
Gilles Gouaillardet
ff8600f2e4 ompi/hook: plug a misc memory leak
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@b79b37465c)
2018-09-10 09:21:49 +09:00
Gilles Gouaillardet
4bd5c538a2 pml/ob1: plug a memory leak in mca_pml_ob1_component_fini()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(back-ported from commit open-mpi/ompi@fed33c1530)
2018-09-10 09:21:12 +09:00
Gilles Gouaillardet
959aeab5d9 ess/hnp: plug a memory leak in rte_finalize()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@d234caef74)
2018-09-10 09:20:16 +09:00
Gilles Gouaillardet
d2646cd565 mpool/memkind: plug a memory leak in mca_mpool_memkind_close()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@ad2c207a7e)
2018-09-10 09:19:57 +09:00
Gilles Gouaillardet
9410de0d27 opal/util: plug a memory leak in the opal_infosubscriber_t destructor
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@7556dd0abb)
2018-09-10 09:19:34 +09:00
Gilles Gouaillardet
c767c63a3b ompi/info: plug memory leaks in ompi_mpiinfo_finalize()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@d0d399c9a9)
2018-09-10 09:18:15 +09:00
Gilles Gouaillardet
080e20fa02 mtl/psm2: fix a misc memory leak
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@316e4e38f4)
2018-09-10 09:17:54 +09:00
Gilles Gouaillardet
baf41aceed pmix/pmix3x: plug a memory leak in external_register()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@aeddd2f249)
2018-09-10 09:17:31 +09:00
Gilles Gouaillardet
8015e6f929 pmix/base: plug a memory leak in opal_pmix_base_select()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>

(cherry picked from commit open-mpi/ompi@6e47c5708e)
2018-09-10 09:16:56 +09:00
Howard Pritchard
71d3afdc59
Merge pull request #5657 from gpaulsen/gpaulsen_v4_vers2
Updating VERSION for shared libs for v4.0.0
2018-09-09 14:29:35 -06:00
Geoff Paulsen
60c16ca9d2
Merge pull request #5640 from hoopoepg/topic/suppress-shmem-wait-until-warning-v4.0
OSHMEM: removed incorrect pshmem_wait_until macro redefinition - v4.0
2018-09-08 09:11:57 -05:00
Geoffrey Paulsen
449020aeaa Updating VERSION for shared libs for v4.0.0
This was done after discussions with core developers about any
  potential ABI breakage for any of the libs the user directly
  links against.  Also compaitiblity tests were done using the
  ibm test suite and building with v3.1.x and running with v4.0.x
  see: https://github.com/open-mpi/ompi/issues/5447

Signed-off-by: Geoffrey Paulsen <gpaulsen@us.ibm.com>
2018-09-08 08:38:37 -05:00
Geoff Paulsen
954692f06e
Merge pull request #5614 from karasevb/v4.0.x_fix_hwloc_numa_obj
v4.0.x: Fixed the NUMA obj detection for hwloc ver >= 2.0.0
2018-09-07 14:49:26 -05:00
Geoff Paulsen
b3d6adbf22
Merge pull request #5655 from hppritcha/topic/update_readme
README: update for 4.0
2018-09-07 14:37:51 -05:00
Geoff Paulsen
a0b4fcce6f
Merge pull request #5649 from hjelmn/v4.0.x_btl_uct_fix
btl/uct: add missing opal_mem_hooks_unregister_release call
2018-09-07 14:02:36 -05:00
Jeff Squyres
38c7364896 btl/openib: don't complain about no NICs
Since openib is on its long, slow way out the door, don't let it
complain about not being able to find any NICs at run time.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 098ec55e37)
2018-09-07 12:01:33 -07:00
Geoff Paulsen
100f7c1f78
Merge pull request #5654 from hppritcha/topic/NEWS_update2_for_400
NEWS: part II of NEWS update for 4.0.0
2018-09-07 13:57:23 -05:00
Howard Pritchard
4d5df45bc8 NEWS: part II of NEWS update for 4.0.0
[skip ci]

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2018-09-07 12:50:21 -06:00
Howard Pritchard
2743fadfec README: update for 4.0
some clean up of old cruft for configure options that
we should have cleaned up a while ago.

[skip ci]

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2018-09-07 12:39:45 -06:00
Howard Pritchard
69f632b8f0
Merge pull request #5619 from jsquyres/pr/v4.0.x/atomic-128-fixes
v4.0.x: atomic 128 fixes
2018-09-06 18:40:55 -06:00
matcabral
8fa172e60b MTL PSM2: Remove shadow variables from v4.0.x
As agreed on #4574, where removed in past release branches
to avoid perfomance impacts in the default values for
some paramters.

Signed-off-by: Matias Cabral <matias.a.cabral@intel.com>
2018-09-05 18:44:40 -04:00
Nathan Hjelm
2fb1a5e1b2 btl/uct: add missing opal_mem_hooks_unregister_release call
This commit fixes a bug when using the UCT btl with the UCX memory
hooks disabled. We were misssing a call to
opal_mem_hooks_unregister_release to remove the btl memory hook
callback.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
(cherry picked from commit 36c206d2d6)
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-09-05 14:02:58 -06:00
Howard Pritchard
b6dafb6b90
Merge pull request #5636 from jsquyres/pr/v4.0.x/verbs-usnic-configury-moar-strictness
v4.0.x: make common/verbs-usnic actually check if it can compile
2018-09-04 09:13:12 -06:00
Howard Pritchard
7e10bc0833
Merge pull request #5607 from edgargabriel/pr/sharedfp-naming-conflict-v4.0
sharedfp/sm and lockedfile: fix naming bug
2018-09-02 16:03:14 -04:00
Sergey Oblomov
6f9da0c3d5 OSHMEM: removed incorrect pshmem_wait_until macro redefinition
- fixes https://github.com/open-mpi/ompi/issues/5585

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
(cherry picked from commit 7a5ff6a076)
2018-09-02 08:32:33 +03:00
Geoff Paulsen
3282c61048
Merge pull request #5625 from hoopoepg/topic/optimize-blocked-calls-v4.0
PML/UCX: blocked calls optimizations - v4.0
2018-08-31 14:11:11 -05:00
Geoff Paulsen
334748753c
Merge pull request #5626 from hoopoepg/topic/opal-mem-hooks-syno-v4.0
MCA/COMMON/UCX: added synonim to opal_mem_hook variable - v4.0
2018-08-31 14:09:14 -05:00
Geoff Paulsen
51e685ff40
Merge pull request #5622 from aravindksg/ofi_race_fix_40x
MTL OFI: Fix race condition due to global progress entries array
2018-08-31 14:07:42 -05:00
Geoff Paulsen
1bf00630b9
Merge pull request #5616 from edgargabriel/pr/file-delete-fs-framework-open-v4.0
io/base: fixes to file_delete selection logic
2018-08-31 14:02:22 -05:00
Geoff Paulsen
325e8d26e8
Merge pull request #5608 from hppritcha/topic/pr5600_to_v4.0.x
Deal with special case during cleanup
2018-08-31 14:00:04 -05:00
Geoff Paulsen
b2daa0001f
Merge pull request #5565 from rhc54/cmr40/pmix301
Update to PMIx 3.0.1
2018-08-31 13:58:41 -05:00
Geoff Paulsen
118f61c928
Merge pull request #5606 from hppritcha/topic/sync_news_for_4.0.x
NEWS: sync 4.0.x NEWS with 3.1.x
2018-08-31 13:57:48 -05:00
Howard Pritchard
d364553667
Merge pull request #5627 from hjelmn/v4.0.x_odls_alps_fix
odls/alps: resolve hang when launching with mpirun on Crays
2018-08-30 18:12:09 -04:00
Jeff Squyres
1d0e695bd6 README: Add note about --with-verbs-usnic
This option isn't needed on modern distros; add a note to README about
it.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 9a8b0d0e18)
2018-08-30 15:11:36 -07:00
Jeff Squyres
3e842348d1 common/verbs-usnic: check that it will actually compile
If someone specifies --with-verbs-usnic, actually do a configury check
to ensure that it will compile (vs. assuming that it will compile if
someone asks for it).

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 05e5f61fe1)
2018-08-30 14:56:37 -07:00
Nathan Hjelm
4eeb41506c odls/alps: resolve hang when launching with mpirun on Crays
This commit removes some code that protected the odls/alps component
from closing alps file descriptors. For some unknown reason leaving
these file descriptors open causes can cause an orted to hang when
launching apps.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
(cherry picked from commit 98172163e6)
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-29 09:22:37 -06:00
Sergey Oblomov
028bcb8a73 MCA/COMMON/UCX: added synonim to opal_mem_hook variable
- added synonim to common ucx variables to allow
  to print it in opal_info -a

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
(cherry picked from commit e00f7a68ba)
2018-08-29 15:17:00 +03:00
Sergey Oblomov
9215eb9a3b PML/UCX: blocked calls optimizations
- refactoring of opal/UCX progress calls
- added UCX progress priority

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
(cherry picked from commit b0f87f2235)
2018-08-29 14:38:22 +03:00
Aravind Gopalakrishnan
37d1a202be MTL OFI: Fix race condition due to global progress entries array
Since progress entries array is globally allocated, it is susceptible
to race conditions when using multi-threaded applications. Allocating it
on the stack resolves any potential races as it is thread local by default.

Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
(cherry picked from commit ed2343034d)
2018-08-28 14:23:56 -07:00
Jeff Squyres
8a0f5c57f3 opal_functions.m4: minor typo fixes
Thanks to George for finding/fixing these.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 9194dbbe7b)
2018-08-28 12:02:22 -07:00
Jeff Squyres
55fd437d0f opal_config_asm.m4: replace tabs with spaces
Whitespace change only; no code or logic changes.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit 63560fe9c4)
2018-08-28 12:02:21 -07:00
Jeff Squyres
420ffe7588 opal_config_asm.m4: Fix the detection of 128 bits atomics.
Thanks to Stefan Teleman for identifying this issue and providing a
proof-of-concept patch.  We ended up revamping the detection of
128-bit atomics to reduce duplicated code and be a slightly simpler --
albiet perhaps a bit more verbose -- approach:

- Remove the --enable-cross-* options; they were confusing and
  unnecessary.
- Always try to compile / link the compiler-intrinsic 128-bit atomic
  functions.
  - Strengthen the C tests we use to be more robust.
  - Use m4 to avoid duplicating the C tests multiple times in the .m4
    source.
- If not cross-compiling, try to run a short test and ensure that they
  actually work (as of Aug 2018, there's at least one platform where
  they don't: clang 6 on ARM64).  If cross-compiling, just assume that
  they work.
- Add more comments about what is going on with all the tests; it's
  tricky stuff.  Our Future Selves will thank us.

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
(cherry picked from commit ff9df91887)
2018-08-28 12:02:21 -07:00