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Rainer Keller
6f808d9b05 Preparation work for another commit (after RFC):
- This patch solely _adds_ required headers and is rather localized
   The next patch (after RFC) heavily removes headers (based on script)
 - ompi/communicator/communicator.h: For sources that use
   ompi_mpi_comm_world, don't require them to include "mpi.h"
 - ompi/debuggers/ompi_common_dll.c: mca_topo_base_comm_1_0_0_t needs
   #include "ompi/mca/topo/topo.h"
 - ompi/errhandler/errhandler_predefined.h:
   ompi/communicator/communicator.h depends on this header file!
   To prevent recursion just have fwd declarations.
   #include "ompi/types.h" for fwd declarations of the main structs.
 - ompi/mca/btl/btl.h: #include "opal/types.h" for ompi_ptr_t 
 - ompi/mca/mpool/base/mpool_base_tree.c: We use ompi_free_list_t and
   ompi_rb_tree_t, so have the proper classes
 - ompi/mca/op/op.h:
   Op is pretty self-contained: Nobody up to now has done
   #include "opal/class/opal_object.h"
 - ompi/mca/osc/pt2pt/osc_pt2pt_replyreq.h:
   #include "opal/types.h" for ompi_ptr_t 
 - ompi/mca/pml/base/base.h:
   We use opal_lists  
 - ompi/mca/pml/dr/pml_dr_vfrag.h:
   #include "opal/types.h" for ompi_ptr_t
 - ompi/mca/pml/ob1/pml_ob1_hdr.h:
   #include "ompi/mca/btl/btl.h" for mca_btl_base_segment_t
 - opal/dss/dss_unpack.c:
   #include "opal/types.h"
 - opal/mca/base/base.h:
   #include "opal/util/cmd_line.h" for opal_cmd_line_t
 - orte/mca/oob/tcp/oob_tcp.c:
   #include "opal/types.h" for opal_socklen_t
 - orte/mca/oob/tcp/oob_tcp.h:
   #include "opal/threads/threads.h" for opal_thread_t
 - orte/mca/oob/tcp/oob_tcp_msg.c:
   #include "opal/types.h" 
 - orte/mca/oob/tcp/oob_tcp_peer.c:
   #include "opal/types.h"  for opal_socklen_t
 - orte/mca/oob/tcp/oob_tcp_send.c:
   #include "opal/types.h" 
 - orte/mca/plm/base/plm_base_proxy.c:
   #include "orte/util/name_fns.h" for ORTE_NAME_PRINT
 - orte/mca/rml/base/rml_base_receive.c:
   #include "opal/util/output.h" for OPAL_OUTPUT_VERBOSE
 - orte/mca/rml/oob/rml_oob_recv.c:
   #include "opal/types.h" for ompi_iov_base_ptr_t
 - orte/mca/rml/oob/rml_oob_send.c:
   #include "opal/types.h" for ompi_iov_base_ptr_t
 - orte/runtime/orte_data_server.c
   #include "opal/util/output.h" for OPAL_OUTPUT_VERBOSE
 - orte/runtime/orte_globals.h:
   #include "orte/util/name_fns.h" for ORTE_NAME_PRINT

 Tested on Linux/x86-64

This commit was SVN r20817.
2009-03-17 21:34:30 +00:00
Rainer Keller
481b801720 - In opal/class/opal_object.h we don't have the extern "C" {
Use BEGIN_C_DECLS/END_C_DECLS
 - Adapt the other headers as well

This commit was SVN r20802.
2009-03-17 15:11:48 +00:00
Rainer Keller
6a72c0f4d1 - As long as a header declares _DECLSPEC functionality
it should include the corresponding _config.h header file.

   Tested on Linux/x86-64

This commit was SVN r20795.
2009-03-17 01:45:19 +00:00
Jeff Squyres
7ec52bc5a4 Per the lengthy discussion on this thread:
http://www.open-mpi.org/community/lists/users/2009/03/8402.php

Just #define away restrict in C++ because we don't have an
AC_CXX_RESTRICT test to see what the C++ compilers needs to support
"restrict".

This commit was SVN r20792.
2009-03-16 21:09:54 +00:00
Rainer Keller
d8cf4c0fec - Get pgcc on XT to complain less:
In case we use memcmp, strlen, strup and friends include <string.h>
   Also several constants.h are not included directly
 - Let's have mca_topo_base_cart_create  return ompi-errors in
   ompi/mca/topo/base/topo_base_cart_create.c

This commit was SVN r20773.
2009-03-13 02:10:32 +00:00
Rainer Keller
296a6fb275 - So much fun along the way:
we normally don't do opal/include/opal/...
   Just use the std. opal/...

This commit was SVN r20766.
2009-03-12 19:21:11 +00:00
Jeff Squyres
02c4f384b8 Convert libnuma to use the new OMPI_SETUP_COMPONENT_PACKAGE macro
This commit was SVN r20747.
2009-03-06 21:49:00 +00:00
George Bosilca
f3cd687c44 We want to allow users to call opal_thread_join(**, NULL) so what we really have
to test against NULL is the void** pointer. This make this function behave 
like the pthread_join.

This commit was SVN r20724.
2009-03-04 17:02:17 +00:00
Shiqing Fan
05d9f0b933 Fix the error C2100 on Windows, i.e. an illegal indirection.
This commit was SVN r20723.
2009-03-04 16:43:51 +00:00
Rainer Keller
fd28b392bf - An intrusive commit yet again (sorry): with the separation we
get bitten by header depending on having already included
   the corresponding [opal|orte|ompi]_config.h header.
   When separating, things like [OPAL|ORTE|OMPI]_DECLSPEC
   are missed.

   Script to add the corresponding header in front of all following
   (taking care of possible #ifdef HAVE_...)

 - Including some minor cleanups to
   - ompi/group/group.h -- include _after_ #ifndef OMPI_GROUP_H
   - ompi/mca/btl/btl.h -- nclude _after_ #ifndef MCA_BTL_H
   - ompi/mca/crcp/bkmrk/crcp_bkmrk_btl.c -- still no need for
     orte/util/output.h
   - ompi/mca/pml/dr/pml_dr_recvreq.c -- no need for mpool.h
   - ompi/mca/btl/btl.h -- reorder to fit
   - ompi/mca/bml/bml.h -- reorder to fit
   - ompi/runtime/ompi_mpi_finalize.c -- reorder to fit
   - ompi/request/request.h -- additionally need ompi/constants.h

 - Tested on linux/x86-64

This commit was SVN r20720.
2009-03-04 15:35:54 +00:00
Rainer Keller
d68a8a1904 - Now that we don't need it anymore, blast away
ompi/class/ompi_bitmap.[ch] -- may always be restored from svn
   again...

This commit was SVN r20710.
2009-03-04 00:28:58 +00:00
Rainer Keller
811f2bd9b4 - As discussed on RFC, move the ompi_bitmap to the
opal layer.
   Add a check against a maximum (actually get rid of ifs internally to
   opal_bitmap.c) -- the functionality to set the current maximum size
   opal_bitmap_set_max_size() is currently only used in attribute.c
   to set the maximum OMPI_FORTRAN_HANDLE_MAX...

   Tested on linux/x86-64 with intel-tests with all_tests_no_perf_f
   run with 6 procs.
   Let's look into MTT as well...

This commit was SVN r20708.
2009-03-03 22:25:13 +00:00
George Bosilca
5f6896ce5b No memory leaks (this is an improvement for r20706).
This commit was SVN r20707.

The following SVN revision numbers were found above:
  r20706 --> open-mpi/ompi@248bbb8a2f
2009-03-03 22:14:05 +00:00
George Bosilca
248bbb8a2f Give a small chance to those with an "IP guru" admin-sys to define what exactly is
a private IPv4 address. By deafult we obide to the RFC1918 and RFC3330, but we have
the opportunity to change them.

Based on a patch from Camille Coti.

This commit was SVN r20706.
2009-03-03 22:06:09 +00:00
Jeff Squyres
cfcca7d80e Fix some typos in comments submitted by Bert Wesarg.
This commit was SVN r20695.
2009-03-03 12:50:46 +00:00
George Bosilca
826f3319b4 Don't segfault on Windows because of a NULL value.
This commit was SVN r20682.
2009-03-02 21:57:16 +00:00
Shiqing Fan
4d3f801dbd Try to find the installed flex on current windows system first, if it's not there, just use the one comes along with the source.
This commit was SVN r20642.
2009-02-26 13:03:53 +00:00
Shiqing Fan
2326f14be5 Remove the unnecessary PROJECT command, I somehow misunderstood how it should be used on Windows....
This commit was SVN r20634.
2009-02-25 16:07:43 +00:00
Eugene Loh
463f11f993 Improve shared-memory allocation:
* compute mmap-file size more wisely and pass requested size to allocator
* change MCA parameters:
  - get rid of mpool_sm_per_peer_size
  - get rid of mpool_sm_max_size
  - set default mpool_sm_min_size to 0
* no longer pad sm allocations to page boundaries
* have sm_btl_first_time_init check return codes on free-list creations

Have mca_btl_sm_prepare_src() check to see if it can allocate an EAGER fragment
rather than a MAX fragment if the smaller size works.

Remove ompi/class/ompi_[circular_buffer_]fifo.h and references thereto.

Remove opal/util/pow2.[c|h] and references thereto.

This commit was SVN r20614.
2009-02-20 19:51:57 +00:00
Jeff Squyres
1a7556d2c9 Refs trac:1805: temporarily disable some assert()s in event_base_free().
This commit was SVN r20609.

The following Trac tickets were found above:
  Ticket 1805 --> https://svn.open-mpi.org/trac/ompi/ticket/1805
2009-02-20 15:03:36 +00:00
Jeff Squyres
ed22f9744e Bring in PLPA v1.3rc3 (add a missing comma, which should fix compiling
issues at Sun).  

Sorry for the middle of the day configure change, but this should fix
a compile break at Sun...

This commit was SVN r20594.
2009-02-19 17:42:43 +00:00
Jeff Squyres
558fc2836d Bump PLPA version to 1.3rc2, which should fix the "make dist" error
from last night's nightly tarball.

This commit was SVN r20576.
2009-02-17 12:54:57 +00:00
Jeff Squyres
4590582807 Bump PLPA to v1.3rc1, which includes a valgrind API fix for a
known-bad memory access pattern.  Specifically, a NULL pointer is
passed in a system call as part of a probe to figure out which
affinity API this system has.  We know it's a NULL and we did it on
purpose, so don't have Valgrind yell about it.

This commit was SVN r20572.
2009-02-17 02:01:30 +00:00
Jeff Squyres
8b9601e35e Put a check in the destructor to ensure that we don't try to free a
NULL pointer.

This commit was SVN r20569.
2009-02-17 01:11:10 +00:00
George Bosilca
918d94f449 Put back the commit r20562 as it had a reason to be there: clean
a memory leak.

This commit was SVN r20566.

The following SVN revision numbers were found above:
  r20562 --> open-mpi/ompi@62c913f851
2009-02-16 20:03:48 +00:00
Josh Hursey
350d9c94ab Backout r20562 since it breaks finalization in the tools (per email to devel).
This commit was SVN r20565.

The following SVN revision numbers were found above:
  r20562 --> open-mpi/ompi@62c913f851
2009-02-16 19:18:43 +00:00
George Bosilca
62c913f851 Release the default base on finalize.
This commit was SVN r20562.
2009-02-14 21:51:09 +00:00
Jeff Squyres
f9043edd39 Ensure to free this string when we're done.
This commit was SVN r20536.
2009-02-12 22:54:43 +00:00
Jeff Squyres
17d9c2c240 Important clarification about the ownership of strings returned by the
current_value parameter to mca_base_param_reg_string() function.

This commit was SVN r20535.
2009-02-12 22:54:29 +00:00
Jeff Squyres
e3ae1468d3 Don't strdup here; there's already a strdup down in
param_set_override().

This commit was SVN r20533.
2009-02-12 22:36:45 +00:00
Ralph Castain
883a0972bc Add missing include file
This commit was SVN r20529.
2009-02-12 16:41:48 +00:00
George Bosilca
84d3ca0c9e Release the memory.
This commit was SVN r20524.
2009-02-11 21:34:27 +00:00
Shiqing Fan
2f1461419c Add a new feature for checking mca subdirectories, i.e. detecting if there is an exclude file list which indicates the files that shouldn't be added to the source list. By default, the CMake build system will simply add all source files in the required sub folders, without knowing which files have to be excluded. The first use of it is in plm/base/.windows.
And clean up the nested variable names, in order to make it readable.

This commit was SVN r20498.
2009-02-10 17:20:13 +00:00
Ralph Castain
4cdf91a8d4 Per the RFC, extend the current use of the ompi_proc_t flags field (without changing the field itself).
The prior ompi_proc_t structure had a uint8_t flag field in it, where only one
bit was used to flag that a proc was "local". In that context, "local" was
constrained to mean "local to this node".

This commit provides a greater degree of granularity on the term "local", to include tests
to see if the proc is on the same socket, PC board, node, switch, CU (computing
unit), and cluster.

Add #define's to designate which bits stand for which local condition. This
was added to the OPAL layer to avoid conflicting with the proposed movement of
the BTLs. To make it easier to use, a set of macros have been defined - e.g.,
OPAL_PROC_ON_LOCAL_SOCKET - that test the specific bit. These can be used in
the code base to clearly indicate which sense of locality is being considered.

All locations in the code base that looked at the current proc_t field have
been changed to use the new macros.

Also modify the orte_ess modules so that each returns a uint8_t (to match the
ompi_proc_t field) that contains a complete description of the locality of this
proc. Obviously, not all environments will be capable of providing such detailed
info. Thus, getting a "false" from a test for "on_local_socket" may simply
indicate a lack of knowledge.

This commit was SVN r20496.
2009-02-10 02:20:16 +00:00
Rainer Keller
64aa384745 - Fix comment to reflect current code.
This commit was SVN r20479.
2009-02-09 00:52:57 +00:00
Shiqing Fan
8086bb1a1b SIGSTOP and SIGTSTP are not supported on Windows. But they have to be defined anyway, although they are not used for Windows.
This commit was SVN r20453.
2009-02-05 17:02:34 +00:00
Shiqing Fan
ff7ca43dd1 Update two configuration files for windows build.
This commit was SVN r20450.
2009-02-05 16:39:40 +00:00
Shiqing Fan
7d2d6b16b1 A fix for windows mainly, adding BEGIN/END_C_DECLS pairs.
This commit was SVN r20448.
2009-02-05 16:35:58 +00:00
Jeff Squyres
67a5374a61 Re CID 1180: Actually, it would be better to also print something in
the case of an error, too...

This commit was SVN r20443.
2009-02-05 15:26:44 +00:00
Jeff Squyres
598e530de9 Fix CID 1180: ensure to check the output from snprintf, since we pass
it to write().

This commit was SVN r20442.
2009-02-05 15:24:48 +00:00
Jeff Squyres
9c2a6da128 Remove errant '>'. How on earth did that work at all?
This commit was SVN r20416.
2009-02-03 23:21:34 +00:00
Jeff Squyres
35c5e28a8e Up to SVN r20383
This commit was SVN r20384.

The following SVN revision numbers were found above:
  r20383 --> open-mpi/ompi@e0638c84c8
2009-01-29 17:59:04 +00:00
Jeff Squyres
bb3d258562 Round up a few places where PATH_MAX was used instead of
OMPI_PATH_MAX.  Thanks to Andrea Iob for the bug report.

This commit was SVN r20360.
2009-01-27 22:57:50 +00:00
Ralph Castain
c92f906d7c Move the daemon collectives out of the ODLS and into the GRPCOMM framework. This removes the inherent assumption that the OOB topology is a tree, thus allowing different grpcomm/routed combinations to implement collectives appropriate to their topology.
This commit was SVN r20357.
2009-01-27 19:13:56 +00:00
Rolf vandeVaart
1872a7b75d This change allows the trunk to be compiled with Sun
Studio compilers again. It has been broken since
1/14/2009 when some changes exposed a bug in autoconf
and how it handles support for the restrict keyword.
Basically, Sun Studio C supports the restrict keyword
but Sun Studio C++ does not.

I am also pursuing a fix with the autoconf folks, but
this change was needed to get things building again.

This commit was SVN r20351.
2009-01-26 20:13:44 +00:00
Jeff Squyres
f3b1432260 Fixes trac:1618: ensure to check to see if the symbol RTLD_NEXT exists
before trying to use it (e.g., it doesn't seem to exist on Cygwin).

This commit was SVN r20343.

The following Trac tickets were found above:
  Ticket 1618 --> https://svn.open-mpi.org/trac/ompi/ticket/1618
2009-01-25 16:38:00 +00:00
Jeff Squyres
6d805eb0dd Ensure to not do the found_files stuff is --disable-dlopen is selected.
This commit was SVN r20320.
2009-01-22 16:46:02 +00:00
Jeff Squyres
58a25cae69 Fixes trac:1271: make the OPAL MCA base read the list of MCA DSO filenames
''once'' and keep the names in an argv-style array.  Each time we go
to open a framework, we just scan that array rather than re-reading
all the filenames from the filesystem.

This commit was SVN r20309.

The following Trac tickets were found above:
  Ticket 1271 --> https://svn.open-mpi.org/trac/ompi/ticket/1271
2009-01-21 22:27:05 +00:00
Josh Hursey
fca3c6e571 Fix the BLCR configuration when explicitly disabling it.
It happened that if we supplied:
 --with-ft=cr --without-blcr
then BLCR would be loaded, due to a logic break in the old m4.

Now this works approprately. This should be moved to v1.3.1

This commit was SVN r20296.
2009-01-19 20:21:58 +00:00
Jeff Squyres
4520b00547 Fixes trac:1587: also check the mca component struct framework and
component name against the filename and ensure that they match.
Ignore the component if they do not.

This commit was SVN r20291.

The following Trac tickets were found above:
  Ticket 1587 --> https://svn.open-mpi.org/trac/ompi/ticket/1587
2009-01-17 12:53:21 +00:00