ports/openmpi
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George Bosilca
d27f17f406 Solve the reference count problem. As the MPI functions always use the ompi_ddt_set_args 
and ompi_ddt_release_args functions, increase the reference count for the used datatypes here
not in the dt_add.c. Tus, we have a correct reference count for all data-type independing if
the datatypes are used in MPI or directly in others modules.

This commit was SVN r7225.
 2005-09-07 20:10:24 +00:00
Brian Barrett
aee3316243 * just for George, don't try to get the SVN r number if we don't need it. This 
should speed up autogen.sh on platforms with really slow svnversion searches,
  as we only need the base version for autogen, which means we don't need the
  r number.
* Since I can't type, add an error message if an invalid argument is given

This commit was SVN r7224.
 2005-09-07 19:59:28 +00:00
Ralph Castain
5d68fa836f Change the flag name to conform to prefix rules 
This commit was SVN r7223.
 2005-09-07 19:43:40 +00:00
Ralph Castain
2c6e47e38c Add a trace utility that provides info on progress through functions. This is not enabled yet - need Jeff or Brian to add it to the configure/build system. 
This commit was SVN r7222.
 2005-09-07 18:52:28 +00:00
Jeff Squyres
b31c2f8e77 Remove unnecessary AM_CPPFLAGS 
This commit was SVN r7221.
 2005-09-07 18:40:56 +00:00
George Bosilca
105595bd08 Make rcache look like a component. The problem is that on MAC OS X ar is more sensitive 
than other Unix OS's and does not accept to be called with any arguments. Therefore,
we need these files in order to succesfully compile even if they are empty.

This commit was SVN r7220.
 2005-09-07 18:09:04 +00:00
George Bosilca
23cb29aefe The src directory is not used anymore but it's still present in the configure.params file. Anyway I don't think this file is used as the .h file does not exist ... 
This commit was SVN r7219.
 2005-09-07 17:16:41 +00:00
George Bosilca
f13690f16e The prototype of ompi_help has been changed. 
This commit was SVN r7218.
 2005-09-07 17:15:00 +00:00
George Bosilca
f0b4553757 Correctly set the include for the ddt_test. 
This commit was SVN r7217.
 2005-09-07 17:05:29 +00:00
Jeff Squyres
881851604b Update the docs on the actual algorithms used 
This commit was SVN r7216.
 2005-09-07 15:46:33 +00:00
Tim Woodall
59f2462ef0 corrections/clarifications 
This commit was SVN r7215.
 2005-09-07 13:40:22 +00:00
Jeff Squyres
9302f924ea simplify the bcast code by taking abstract actions and making them 
macros -- will help with the other algorithms

This commit was SVN r7214.
 2005-09-07 13:33:43 +00:00
Tim Woodall
3e002203a0 dont need to adjust size 
This commit was SVN r7213.
 2005-09-07 13:25:05 +00:00
Brian Barrett
ed56e743b7 * update configure.ac to use the modern version of AC_INIT and 
AM_INIT_AUTOMAKE, instead of the deprecated version.
* Work around dumbness in modern AC_INIT that requires the version
  number to be set at autoconf time (instead of at configure time, as
  it was before).  Set the version number, minus the subversion r number,
  at autoconf time.  Override the internal variables to include the r
  number (if needed) at configure time.  Basically, the right thing
  should always happen.  The only place it might not is the version
  reported as part of configure --help will not have an r number.
* Since AM_INIT_AUTOMAKE taks a list of options, no need to specify
  them in all the Makefile.am files.
* Addes support for subdir-objects, meaning that object files are put
  in the directory containing source files, even if the Makefile.am is
  in another directory.  This should start making it feasible to
  reduce the number of Makefile.am files we have in the tree, which
  will greatly reduce the time to run autogen and configure.

This commit was SVN r7211.
 2005-09-07 05:54:53 +00:00
Brian Barrett
17f60894c5 * per conversation with Tim, registration macro should be on by default 
This commit was SVN r7210.
 2005-09-07 05:01:51 +00:00
Jeff Squyres
8c845a3d28 Update svn:ignore 
This commit was SVN r7207.
 2005-09-06 21:57:11 +00:00
Josh Hursey
a5e5924217 Added a custom arguments MCA param for Slurm PLS. 
This allows the user to specify certain options to srun when an application
is launched with this PLS.

A useful example is the need to set the time to wait from when the first
process completes and when slurm kills remaining processes:

  pls_slurm_args=--wait=1200

This commit was SVN r7206.
 2005-09-06 21:52:28 +00:00
Jeff Squyres
7bab4ed269 bunches of updates 
- finally added "in use" flags -- one flag protects a set of segments
- these flags now used in bcast to protect (for example) when a
  message is so long that the root loops around the segments and has
  to re-use old segments -- now it knows that it has to wait until the
  non-root processes have finished with that set of segments before it
  can start using them
- implement allreduce as a reduce followed by a bcast (per discussion
  with rich)
- removed some redundant data on various data structures
- implemented query MCA param ("coll_sm_shared_mem_used_data") that
  tells you how much shared memory will be used for a given set of MCA
  params (e.g., number of segments, etc.).  For example:

  ompi_info --mca coll_sm_info_num_procs 4 --param coll sm | \
	    grep shared_mem_used_data

  tells you that for the default MCA param values (as of r7172), for 4
  processes, sm will use 548864 bytes of shared memory for its data
  transfer section
- remove a bunch of .c files from the Makefile.am that aren't
  implemented yet (i.e., all they do is return ERR_NOT_IMPLEMENTED)

Now on to the big Altix to test that this stuff really works...

This commit was SVN r7205.

The following SVN revision numbers were found above:
  r7172 --> open-mpi/ompi@bc72a7722b
 2005-09-06 21:41:55 +00:00
Jeff Squyres
d38316ddbf Update svn:ignore 
This commit was SVN r7204.
 2005-09-06 21:32:20 +00:00
Jeff Squyres
c5dc8762a2 Remove useless SUBDIRS line 
This commit was SVN r7203.
 2005-09-06 21:31:50 +00:00
Tim Woodall
7ccc43a052 correct for btls that don't support get 
This commit was SVN r7201.
 2005-09-06 19:01:35 +00:00
Tim Woodall
a3786c4579 dont attempt to deregister if not supported 
This commit was SVN r7200.
 2005-09-06 18:27:53 +00:00
Tim Woodall
d7d717af46 correction for case where registration not supported 
This commit was SVN r7199.
 2005-09-06 18:27:07 +00:00
Jeff Squyres
383d9f58e7 Be [slightly] more descriptive. :-) 
This commit was SVN r7198.
 2005-09-06 16:57:11 +00:00
Ralph Castain
47bf2574e1 Ensure that subscriptions for a specific requestor/subscription return id only get registered once. It appears that sometimes the system registers a subscription for the same return location multiple times. This prevents getting multiple callbacks when that happens. Still need to track down why it is happening at all. 
This commit was SVN r7197.
 2005-09-06 16:33:41 +00:00
Rainer Keller
a13d513bbe - Rename of unused define, sitting in tree. 
This commit was SVN r7196.
 2005-09-06 16:17:08 +00:00
Rainer Keller
a36347d728 - Support -prefix specification on mpirun/orterun cmd-line per 
app_context:
  mpirun -np 2 -prefix /path/to/ompi/on/machineA ./exec1 : \
         -np 2 -prefix /path/to/ompi/on/machineB ./exec2

- Allow with -mca pls_rsh_assume_same_shell 0, the checking for the
  SHELL-variable on the actual node (currently 1st node).
  Sets the prefix, PATH and LD_LIBRARY_PATH for bash/ksh and 
  csh/tcsh.

This commit was SVN r7195.
 2005-09-06 16:10:05 +00:00
Galen Shipman
e5ea1b55ef fix for threaded build 
This commit was SVN r7194.
 2005-09-06 15:21:31 +00:00
Galen Shipman
a47cb00f84 fix bug in threaded build.. 
This commit was SVN r7193.
 2005-09-06 14:37:46 +00:00
Ralph Castain
7fc67f57a5 Little logic cleanup and handle thread locking correctly. 
This commit was SVN r7192.
 2005-09-06 14:04:43 +00:00
Jeff Squyres
dc7326a5e5 Minor fix to find header files. 
This commit was SVN r7191.
 2005-09-06 10:35:17 +00:00
Graham Fagg
b97305bbcc a few more functions (testing) 
This commit was SVN r7190.
 2005-09-06 05:21:57 +00:00
George Bosilca
648ef2ae5c One of the latest gcc version bark about a variable being use uninitialized. It was kind of right, because the 
variable was protected by another one ... But with few modifications I get rid of this warning.

This commit was SVN r7189.
 2005-09-06 03:13:03 +00:00
George Bosilca
5df64827c8 The MX BTL and PTL does not require the same version of the MX library. The BTL accept the 
default version while the PTL require a patched version (iwith the mx_register_match_callback function).

This commit was SVN r7188.
 2005-09-06 03:11:42 +00:00
Brian Barrett
444f92e957 * add a fairly hard to fix blocks in use report from the event library to 
the OMPI suppressions file.  Yeah, we could fix it, but that would mean
  threading a finalize routine through the event library...

This commit was SVN r7187.
 2005-09-05 21:04:07 +00:00
Brian Barrett
4e20c83204 * fix memory leak in ORTE startup 
This commit was SVN r7186.
 2005-09-05 21:03:02 +00:00
Brian Barrett
6f19022db9 * Update Portals configuration to use --with-portals instead of 
--with-btl-portals
* Update Red Storm build config file tomatch change

This commit was SVN r7185.
 2005-09-05 21:02:50 +00:00
Jeff Squyres
3645816aef - Add copyrights 
- Minor style fixes

This commit was SVN r7184.
 2005-09-05 18:51:59 +00:00
Jeff Squyres
5702c8f29b Fix help messages and docs about --with arguments 
This commit was SVN r7183.
 2005-09-05 18:51:34 +00:00
Galen Shipman
f541088bc3 typo broke the threaded build.. 
This commit was SVN r7182.
 2005-09-05 16:43:01 +00:00
George Bosilca
3078be40aa First stable version of the MX BTL (at least we pass NetPipe). The perfs are not amazing 
but are not that bad either.

On a 2 procs Intel(R) Xeon(TM) CPU 3.20GHz with MYRICOM Inc. Myrinet 2000 Scalable Cluster Interconnect (rev 04) I get:

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This commit was SVN r7180.
 2005-09-04 22:08:13 +00:00
Rainer Keller
588a62cb90 - Missed file in last commit 
This commit was SVN r7179.
 2005-09-04 20:55:27 +00:00
Rainer Keller
192625d2a1 - Once again: uninteresting cleanup to get diff smaller. 
This commit was SVN r7178.
 2005-09-04 20:54:19 +00:00
Galen Shipman
1af92a1de2 tried to acquire wrong lock.. 
This commit was SVN r7177.
 2005-09-04 13:26:46 +00:00
Galen Shipman
ba9342085e Changes to support rcache in mpool 
This commit was SVN r7176.
 2005-09-04 04:20:55 +00:00
Galen Shipman
dc769e3560 Initial checking of rcache.. svn issues required mult checkins.. 
This commit was SVN r7175.
 2005-09-04 04:19:31 +00:00
Galen Shipman
2314919b73 Initial checkin of rcache 
This commit was SVN r7174.
 2005-09-04 04:17:00 +00:00
Brian Barrett
492aeecd11 * track the actual allocations within the ompi and opal free_lists, so that 
we can free all allocated memory when the free_list is destructed.  Fixes
  a whole bunch of memory leaks...

This commit was SVN r7173.
 2005-09-03 19:46:44 +00:00
Jeff Squyres
bc72a7722b Updates: 
- bcast now works properly for root!=0 and multi-fragment messages
- destroy mpool when communicator is destroyed
Still need to implement:
- "in use" flags for groups of fragments so that "wrapping around" in
  the data segment doesn't overwrite not-yet-read data
- ensure that shared memory isn't removed before all processes have
  finished with it (e.g., during COMM_FREE)

This commit was SVN r7172.
 2005-09-03 11:49:46 +00:00
Jeff Squyres
e53fa399dc Bump the required version of Libtool up to 1.5.16 
This commit was SVN r7171.
 2005-09-03 10:11:30 +00:00