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Автор SHA1 Сообщение Дата
Josh Hursey
b1da6f8bc4 A bit more cleanup for that last patch.
* num_children should really be an int instead of size_t
  since 'size_t' is not signed and num_children can (in rare cases)
  drop below 0, and don't want it to roll around to MAX_INT or some
  such.

 * I figured out that this problem only happened to me because I use
  the pls_fork_reap_timeout MCA parameter and thus the only time that
  the code in pls_fork_module.c to waitpid is executed is if this is
  not set to 0 (I had it set to 1 to give my procs time to exit). I
  adjusted the loop from while{...} to do{...}while; so that it is
  executed at least once for consistency.

 * de-register the SIGCHILD callback for the pid before we attempt
  to kill it, so that we don't leave the door open for both the
  waitpids (the one in the callback, and the one in this function)
  to race to see who can wait on the child.

 * Move the 'thread release' to outside the for loop for a bit of an
  optimization, and always set the value to 0 since we want to 
  finish after this function.

 * Added a help message for the case when we can't send a kill()
   signal to the process. Should never happen, but all is possible
   in the wild wild west of HPC.

This commit was SVN r10666.
2006-07-05 21:38:23 +00:00
Galen Shipman
fe480cd003 change mask bits and don't call convertor if we received directly into the
user buffer.. 

This commit was SVN r10665.
2006-07-05 21:10:09 +00:00
Jeff Squyres
429c25095e Fix for bug #176.
* Fix for two problems introduced by r10661:
   1. ensure to use the key ''after'' it is initialized (sigh).
   1. handle the case where we free the attrkey before it is fully
      initialized (i.e., some other error causes us to free it).  In
      this case, don't try to remove the key from the hash map,
      because it won't exist.
 * More accurate zeroing in the keyval constructor
   (ompi_attrkey_item_constructor)
 * Widen the scope of the alock such that the attrkey destructor does
   not need to acquire it.  Instead, assume that the caller already
   has it.
 * Add a comment about why the keyval may get destroyed as the result
   of deleting an attribute (so that I don't have to figure it out
   again the next time I read this code :-) )

This commit was SVN r10664.

The following SVN revision numbers were found above:
  r10661 --> open-mpi/ompi@fdba2c9df0
2006-07-05 20:23:08 +00:00
George Bosilca
6265625983 Generate the XFER_CONTINUE PERUSE event (or the receive) before unpacking the data.
This commit was SVN r10663.
2006-07-05 19:45:00 +00:00
Josh Hursey
696bb4a0c0 A partial fix for the hanging orted bugs (Ticket #177)
When we force an application to terminate (via CTRL-C to mpirun)
we send an out-of-band message to the orted to reap its children.
the fork PLS was doing an internal waitpid but never releasing or
updating the information and signaling the condition variable. So
the fork PLS callback for SIGCHLD registered with the event library
and this waitpid are in a bit of a race to 'waitpid' for the children.
Since the PLS callback was the only one that handled the signal properly
when it 'won' then things were great -- as in the normal termination case.
But when it 'lost' -- as in the abnormal termination case -- the orted
never received the proper signal that its children had gone away.

We want to preserve the internal fork PLS callback since it allows
for a timeout while waiting for the child, which the event library
won't do.

This allows both to exist, and behave properly.

This was introduced in r9068.

The ticket is still open since the orted's hang in other situations
still. This is a fix for one of the causes.

This commit was SVN r10662.

The following SVN revision numbers were found above:
  r9068 --> open-mpi/ompi@c2c2daa966
2006-07-05 19:37:29 +00:00
Jeff Squyres
fdba2c9df0 Per the analysis in bug #184, move some assignments around to effect
thread safety.  This is likely to be only the first of multiple steps
for complete thread safety in the MPI attribute code.  All tests
[continue to] pass the intel and ibm attribute tests.

Also renamed a variable from "attr" to "attrkey" to reflect that it's
a keyval, not an attribute.

This commit was SVN r10661.
2006-07-05 17:37:17 +00:00
Brian Barrett
4ee4acb6a6 * ignore some Cray-only code when not on the Cray machine
This commit was SVN r10660.
2006-07-05 17:16:27 +00:00
Brian Barrett
043153dad3 * fix opal_list_item_t -> ompi_free_list_item_t type change
This commit was SVN r10659.
2006-07-05 17:02:16 +00:00
Rainer Keller
23d3628691 - Declare and initialize the peruse_handle_list_lock
This commit was SVN r10656.
2006-07-05 13:48:25 +00:00
Jeff Squyres
789dd47d1b Sync NEWS with 1.1.1
This commit was SVN r10654.
2006-07-05 13:23:43 +00:00
Jeff Squyres
538965aeb0 Final merge of stuff from /tmp/tm-stuff tree (merged through
/tmp/tm-merge).  Validated by RHC.  Summary:

- Add --nolocal (and -nolocal) options to orterun
- Make some scalability improvements to the tm pls

This commit was SVN r10651.
2006-07-04 20:12:35 +00:00
George Bosilca
d2bf3844e9 Include the header file which define opal_output.
This commit was SVN r10648.
2006-07-04 06:23:01 +00:00
George Bosilca
2bdb06b549 Force the request to NULL in order to avoid complaints from the compiler.
This commit was SVN r10647.
2006-07-04 06:20:13 +00:00
George Bosilca
402a03d229 Add a .h dependency in order to remove a warning when we compile without --enable-debug.
This commit was SVN r10646.
2006-07-04 04:53:38 +00:00
George Bosilca
9ac1a6cdb3 Remove the warnings. Now they are ompi_free_list_item not opal_list_item_t.
This commit was SVN r10645.
2006-07-04 04:21:16 +00:00
Brian Barrett
7d12f9119a * make sure to include post_configure.sh in the dist tarball, so that
direct calling the ob1 pml works properly.

This commit was SVN r10644.
2006-07-04 04:03:58 +00:00
Brian Barrett
27d9e26721 Fix for ticket #179. Print a reasonable error message if we fail to parse
the compiler data file.  Also, actually fix the bug by expanding out
datarootdir before letting it get in install_dirs.h.

This commit was SVN r10643.
2006-07-04 03:00:01 +00:00
Brian Barrett
47725c9b02 * Add new PML (CM) and network drivers (MTL) for high speed
interconnects that provide matching logic in the library.
  Currently includes support for MX and some support for
  Portals
* Fix overuse of proc_pml pointer on the ompi_proc structuer, 
  splitting into proc_pml for pml data and proc_bml for
  the BML endpoint data
* bug fixes in bsend init code, which wasn't being used by
  the OB1 or DR PMLs...

This commit was SVN r10642.
2006-07-04 01:20:20 +00:00
Josh Hursey
5c5ce7e051 When 'mca_oob_send_callback' accesses the callback 'orte_pls_rsh_terminate_job_cb'
with an error status (< 0) then the req buffer is NULL. Put checks around the
OBJ_RELEASE(req) calls so that we don't try to release NULL :/

This commit was SVN r10641.
2006-07-03 22:44:54 +00:00
Josh Hursey
d082a63734 Add some new OPAL functionality.
After seeing the uglyness that is removing directories in the
codebase I decided to push down this to the OPAL by extending the
opal/os_create_dirpath.(c|h) to contain some more functionality.

In this process I renamed 'os_create_dirpath' to 'os_dirpath' since it
is a bit more general now.

Added a few functions to:
 - check if an directory is empty
 - check to see if the access permissions are set correctly
 - destroy the directory at the end of the dirpath
   - By using a caller callback function (a la Perl, I believe)
     for every file, the caller can have fine grained control over
     whether a specific file is deleted or not.

This simplifies things a bit for orte_session_dir_(finalize|cleanup)
as it should no longer contain any of this functionality, but uses
these functions to do the work.

From the external perspective nothing has changed, from the 
developer point of view we have some cleaner, more generic code.

This commit was SVN r10640.
2006-07-03 22:23:07 +00:00
Josh Hursey
38df31e488 A bit of cleanup in the pretty_printing, making it a bit more sane.
Since we don't properly handle connecting/disconecting from multiple
universes, only connect to the first one (or the user specified one).
This is a bug that needs to be fixed, but involves some deep magic in
ORTE.

Print the node segment upon request (-n option). 
{{{
Node Name | Arch | Cell ID |   State | Slots | Slots Max | 
-----------------------------------------------------------
  odin001 |      |       0 | Unknown |     2 |         4 | 
  odin002 |      |       0 | Unknown |     2 |         5 | 
  odin003 |      |       0 | Unknown |     2 |         6 | 
  odin004 |      |       0 | Unknown |     2 |         7 | 
}}}

Since node_slots_alloc and node_slots_inuse are not properly updated
in the GPR don't print those values.

This commit was SVN r10633.
2006-07-03 17:11:02 +00:00
Josh Hursey
fc72eb4a01 remove a residual warning
This commit was SVN r10628.
2006-07-03 15:16:15 +00:00
Jeff Squyres
06fb5fcce0 - Added a missing original entry in the changelog
- Just use the prefix in the % files list so that we a) grab the whole
  tree and b) it removes all the directories when the RPM is removed.
  Thanks to Bernard Li for reporting the problem.

This commit was SVN r10617.
2006-07-02 12:08:48 +00:00
Brian Barrett
0bd5acc51f * Fix for bus error in XGrid starter
This commit was SVN r10615.
2006-07-01 16:16:46 +00:00
Graham Fagg
f10c21b746 corrected mca param description and algorithm count
(now to find out why I have disallowed direct calling fo the bm tree)

This commit was SVN r10603.
2006-06-30 23:22:49 +00:00
Josh Hursey
2edf1511fd Closes ticket #173 : Split name linking up for orte/ompi shared tools.
This moves the logic to create the symbolic links for:
 - mpirun
 - mpiexec
 - ompi-ps
 - ompi-clean
and their respective man pages to the ompi level from
the orte layer.

This is a bit pedantic, but orte shouldn't be doing the
work of ompi since that is a bit of an abstraction break.

Note: need to autogen.sh to get this. Sorry :(

This commit was SVN r10602.
2006-06-30 22:01:56 +00:00
Graham Fagg
f64cbbe8f2 ops. some decisions used extent rather than size for decision making
yes this means it WAS possible for two nodes to choice two different algorithms
(discovered by Doug Gregor and figured out by George)
Also changed some names like size to comsize so we know which sizes we are using where
This should be updated in al versions

This commit was SVN r10601.
2006-06-30 21:49:04 +00:00
Brian Barrett
df9273587f * romio_cb_write should also be forced to enable when optimizations are
requested

This commit was SVN r10584.
2006-06-30 15:06:10 +00:00
Josh Hursey
c356f4e948 forgot to init a var. Thanks Jeff for catching this
This commit was SVN r10583.
2006-06-30 14:22:58 +00:00
Galen Shipman
7e079d20ab fix for stupid casting.. addresses issue on PPC64 where sizes get set
improperly and badness ensues..

This commit was SVN r10574.
2006-06-29 21:58:50 +00:00
Jeff Squyres
a59afbc8af Also allow .tar.bz2 files to snarf the version
This commit was SVN r10572.
2006-06-29 19:52:38 +00:00
George Bosilca
7d59a6885b Remove all references to the MRU list. Add back the repost list checks. For some reasons
it decrease the latency by around 0.3 micro-seconds ...

This commit was SVN r10571.
2006-06-29 19:25:44 +00:00
Ralph Castain
54018b114b Do a proper restart - fixes the inconsistent communications that were observed via the console.
This commit was SVN r10570.
2006-06-29 19:05:41 +00:00
George Bosilca
78f0de127d Typo.
This commit was SVN r10567.
2006-06-29 15:16:25 +00:00
George Bosilca
4df58b5579 Latency is LATENCY as everybody understand it not some percentage of something. Now, we really
order the BTL depending on the real latency for the eager protocol. Starting from now, the
latency one can specify for the devices will be in micro-second, while the bandwidth is in Mbs
(as it was before).

This commit was SVN r10566.
2006-06-29 15:13:58 +00:00
George Bosilca
238147f576 Help the compiler to optimize the code. Now the order in the enum reflect the
order we use them in the switch.

This commit was SVN r10565.
2006-06-29 15:10:58 +00:00
George Bosilca
9bf281bca2 Remove the gm_mru_reg list as it is never used. Cleanup the repost logic. Now we repost
a receive fragment only when we're done with the message from inside and we try to add it
to the list.

This commit was SVN r10564.
2006-06-29 15:10:11 +00:00
Ralph Castain
a90f8feb35 Need to initialize the buffer in the contact_info command.
This commit was SVN r10563.
2006-06-29 14:57:10 +00:00
Brian Barrett
0482bbd94b * add event into dist_subdirs so that the Makefile.in gets created
This commit was SVN r10559.
2006-06-28 22:53:21 +00:00
Josh Hursey
793bbc667a bringing over orte-clean from tmp/jjhursey-ft-cr branch
per a request.

Currently it is not working well. That will soon change
as it just needs a bit of attention and testing to
make it lots-mo-betta.

This commit was SVN r10556.
2006-06-28 22:33:54 +00:00
Josh Hursey
9c0a279522 Moved the 'orte-ps' command from the tmp/jjhursey-ft-cr branch
per a request for its functionality into the main trunk.

This command provides basic information about a running job. It
needs a bit of attention, but works fine in its current iteration.

Please play with it, and lets try to work out all the left over bugs.

Pending action for this tool:
It has been requested that the tool be changed slightly to allow
it to be called via a function call from internal libraries
(e.g. orteconsole).

This commit was SVN r10554.
2006-06-28 22:06:13 +00:00
Josh Hursey
f8541ea644 Actually define the "mca_base_param_env_var" function that was declared.
This commit was SVN r10551.
2006-06-28 21:54:31 +00:00
Josh Hursey
0a931f9fad Brining over the session directory and universe changes
from the tmp/jjhursey-ft-cr branch.

In this commit we change the way universe names are created.
Before we by default first created "default-universe" then
if there was a conflict we created "default-universe-PID"
where PID is the PID of the HNP.
Now we create "default-universe-PID" all the time (when
a default universe name is used). This makes it much 
easier when trying to find a HNP from an outside app 
(e.g. orte-ps, orteconsole, ...)

This also adds a "search" function to find all of the 
universes on the machine. This is useful in many contexts
when trying to find a persistent daemon or when trying to 
connect to a HNP.

This commit also makes orte_universe_t an opal_object_t, 
which is something that needed to happen, and only effected
the SDS in one of it's base functions.


I was asked to bring this over to aid in fixing orteconsole
and orteprobe. Due to the change of orte_universe_t to 
an object orteprobe may need to be updated to reflect this 
change. Since orteprobe needs to be looked at anyway I'll
leave this to Ralph to take care of.

*Note*:
These changes do not depend upon any of the FT work (but
the FT work does depend upon them). These were brought over
to help in fixing some of the ORTE tool set that require
the functionality layed out in this patch.

Testing:
Ran the 'ibm' tests before and after this change, and all was
as well as before the change. If anyone notices additional
irregularities in the system let me know. But none are expected.

This commit was SVN r10550.
2006-06-28 21:03:31 +00:00
George Bosilca
43b7b17033 Release the memory registration when the descriptors get freed.
This commit was SVN r10540.
2006-06-28 15:24:16 +00:00
George Bosilca
d9daa34a6c Set the registration field to NULL when we create a new fragment.
This commit was SVN r10539.
2006-06-28 15:23:36 +00:00
Gleb Natapov
c8f75c472a remove modulo op from fast path. Improvement 0.02-0.04ms.
This commit was SVN r10538.
2006-06-28 12:00:47 +00:00
Gleb Natapov
e58a89ef3e OMPI_ENABLE_DEBUG is always defined (to 0 or 1). Use #if and nto #ifdef.
This commit was SVN r10537.
2006-06-28 11:25:09 +00:00
Gleb Natapov
704a5eb645 Support for LMC (lid mask count) and multiple QPs per port.
This commit was SVN r10536.
2006-06-28 07:23:08 +00:00
Brian Barrett
56a86c89b1 * Fix for bug #152. Make --with-FOO-libdir=DIR only check DIR, and not the
DIR/lib and DIR/lib64, which really never made sense.

This commit was SVN r10535.
2006-06-28 03:33:30 +00:00
Galen Shipman
e6cd8db0e5 DR will now checksum on a per btl basis (see MCA_BTL_FLAGS_NEED_CSUM). We
still always send ACK's, teasing apart completion for ACK/no ACK looks like a
pain in the .. 

This commit was SVN r10530.
2006-06-27 20:23:47 +00:00