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Автор SHA1 Сообщение Дата
Brian Barrett
6d7a1fbb82 Move opal_portable_platform.h to opal/include/opal, which is where it really
should have been all along and fix one place that uses the file

Update opal_portable_platform.h with changes to mpi_portable_platform.h made 
in r29608.

Make mpi_portable_platform.h a symlink to opal_portable_platform.h, so that
they won't get out of sync.  I'd like to remove mpi_portable_platform.h, but
we don't automatically add -I${includedir}/openmpi/ to make that sane from
a header include point of view, so that's future work.

This commit was SVN r29618.

The following SVN revision numbers were found above:
  r29608 --> open-mpi/ompi@b71bd51cdd
2013-11-06 17:12:26 +00:00
Brian Barrett
9780043456 re-apply r29608 and fix the broken configure test that broke worse with the
patch.  See ticket #3885, comment 10 for an explination of why calling
_STRINGIFY on something that's not a numerical constant is always a bad idea.

This commit was SVN r29613.

The following SVN revision numbers were found above:
  r29608 --> open-mpi/ompi@b71bd51cdd
2013-11-05 22:41:10 +00:00
Jeff Squyres
36e9987ce6 Reverting r29608 (C++11 fix); it's causing some problems.
This commit was SVN r29611.

The following SVN revision numbers were found above:
  r29608 --> open-mpi/ompi@b71bd51cdd
2013-11-05 22:13:11 +00:00
Jeff Squyres
b71bd51cdd Fix C++11 issue identified by Jeremiah Willcock
(http://www.open-mpi.org/community/lists/users/2013/11/22912.php).

cmr=v1.7.4:reviewer=brbarret

This commit was SVN r29608.
2013-11-05 19:48:03 +00:00
Nathan Hjelm
195c892a9d Add support for MPI_Comm_dup_with_info, MPI_Comm_create_group, and
MPI_Comm_idup.

As part of this work I implemented a basic request scheduler in
ompi/comm/comm_request.c. This scheduler might be useful for more
than just communicator requests and could be moved to ompi/request
if there is a demand. Otherwise I will leave it where it is.

Added a non-blocking version of ompi_comm_set to support ompi_comm_idup.
The call makes a recursive call to comm_dup and a non-blocking version
was needed. To simplify the code the blocking version calls the nonblocking
version and waits on the resulting request if one exists.

cmr=v1.7.4:reviewer=jsquyres:ticket=trac:3796

This commit was SVN r29334.

The following Trac tickets were found above:
  Ticket 3796 --> https://svn.open-mpi.org/trac/ompi/ticket/3796
2013-10-02 14:26:40 +00:00
Jeff Squyres
114022146a Add a missing "const" to MPI_Unpack (addendum to r29266).
Refs trac:3785.

This commit was SVN r29278.

The following SVN revision numbers were found above:
  r29266 --> open-mpi/ompi@0b8fc13299

The following Trac tickets were found above:
  Ticket 3785 --> https://svn.open-mpi.org/trac/ompi/ticket/3785
2013-09-27 12:48:28 +00:00
Nathan Hjelm
0b8fc13299 MPI-3.0: update C bindings with const and consistent use of [] for
arrays.

The MPI 3.0 standard added const to all in buffers in the C bindings. This
commit adds the const keyword and in most cases casts const away. We will
eventually should go through and update the various interfaces (coll, pml,
io, etc) to take the const keyword. The group, comm, win, and datatype
interfaces have been updated with const.

cmr=v1.7.4:ticket=trac:3785:reviewer=jsquyres

This commit was SVN r29266.

The following Trac tickets were found above:
  Ticket 3785 --> https://svn.open-mpi.org/trac/ompi/ticket/3785
2013-09-26 21:56:20 +00:00
Nathan Hjelm
c5596548b2 MPI-3: Add support for neighborhood collectives
Blocking versions are simple linear algorithms implemented in coll/basic. Non-
blocking versions are from libnbc 1.1.1. All algorithms have been tested with
simple test cases.

cmr=v1.7.4:reviewer=jsquyres

This commit was SVN r29265.
2013-09-26 21:55:08 +00:00
Nathan Hjelm
7929fb9dea Cleanup complex datatypes and update datatypes and operator code to use C99.
This commit changes the underlying opal complex datatypes to match the
C99 types: float _Complex, double _Complex, and long double _Complex. The
fortran and C++ types now are aliases to these basic types instead of
structure types. The operators in ompi/mca/op/base now work on only the
C99 types and the fortran types use these operators if the fortran type
matches a C complex type (this should almost always be the case.)

C99 is not is use in both the datatype and operator code and should make
the code both cleaner and much less fragile.

This commit was SVN r29193.
2013-09-17 17:49:42 +00:00
Jeff Squyres
c7ff45d046 This define is not needed in mpi.h (it's private to the
implementation, and is already included in opal_config.h)

This commit was SVN r28964.
2013-07-30 21:33:19 +00:00
Nathan Hjelm
9c519c5ce8 Bump MPI version to 2.2 now that in place alltoall and reductions on MPI_C_*COMPLEX and MPI_CXX_*COMPLEX are supported
This commit was SVN r28958.
2013-07-26 15:51:38 +00:00
Nathan Hjelm
c6e586a81d MPI-3: fortran support for large counts using derived datatypes
Jeff:
 - Make sure not to go over 72 characters.  Love Fortran!
 - Ensure to include 'mpif-config.h' in Type_size_x.

This commit was SVN r28933.
2013-07-23 15:36:03 +00:00
Nathan Hjelm
c4c69b4ddf MPI-3: add support for large counts using derived datatypes
Add support for MPI_Count type and MPI_COUNT datatype and add the required
MPI-3 functions MPI_Get_elements_x, MPI_Status_set_elements_x,
MPI_Type_get_extent_x, MPI_Type_get_true_extent_x, and MPI_Type_size_x.
This commit adds only the C bindings. Fortran bindins will be added in
another commit. For now the MPI_Count type is define to have the same size
as MPI_Offset. The type is required to be at least as large as MPI_Offset
and MPI_Aint. The type was initially intended to be a ssize_t (if it was
the same size as a long long) but there were issues compiling romio with
that definition (despite the inclusion of stddef.h).

I updated the datatype engine to use size_t instead of uint32_t to support
large datatypes. This will require some review to make sure that 1) the
changes are beneficial, 2) nothing was broken by the change (I doubt
anything was), and 3) there are no performance regressions due to this
change.

Increase the maximum number of predifined datatypes to support MPI_Count

Put common get_elements code to ompi/datatype/ompi_datatype_get_elements.c

Update MPI_Get_count to reflect changes in MPI-3 (return MPI_UNDEFINED when the count is too large for an int)

This commit was SVN r28932.
2013-07-23 15:35:14 +00:00
Nathan Hjelm
1349b825c2 MPI-2.2: Add C++ datatypes to mpi.h and fix support for MPI_C_*COMPLEX
This commit was SVN r28919.
2013-07-22 23:45:45 +00:00
Nathan Hjelm
e6e9f2c6fd Add profiling function definitions for MPI_T and add a missing type into mpi.h
This commit was SVN r28803.
2013-07-16 16:03:33 +00:00
Nathan Hjelm
d446675526 MCA: Per-RFC, add support for performance variables
This commit adds an API for registering and querying performance
variables (mca_base_pvar) in the MCA base. The existing MCA variable
system API has been updated to reflect the new API: MCA variable
groups have performance variables, and new types have been added (double,
unsigned long long) to reflect what is required by the MPI_T
interface. Additionally, the MCA variable group code has been split
into its own set of files: mca_base_var_group.[ch].

Details of the new API can be found in doxygen comments in the header:
mca_base_pvar.h.

Other changes to the variable system:

 - Use an opal_hash_table to speed up variable/group lookup.

 - Clean up code associated with MCA variable types.

 - Registered performance variables are printed by ompi_info -a. In the
   future an option should be added to control this behavior.

Changes to OMPI:

 - Added full support for the MPI_T performance variable interface.

This commit was SVN r28800.
2013-07-16 16:02:13 +00:00
George Bosilca
5fae72b9aa Add the MPI 2.2 MPI_Dist_graph functionality.
This patch reshape the way we deal with topologies completely. Where
our topologies were mainly storage components (they were not capable
of creating the new communicator), the new version is built around a
[possibly] common representation (in mca/topo/topo.h), but the functions
to attach and retrieve the topological information are specific to each
component. As a result the ompi_create_cart and ompi_create_graph functions
become useless and have been removed.

In addition to adding the internal infrastructure to manage the topology
information, it updates the MPI interface, and the debuggers support and
provides all Fortran interfaces.

This commit was SVN r28687.
2013-07-01 12:40:08 +00:00
Nathan Hjelm
bccf8c657a Per RFC add initial support for the MPI 3.0 tools interface.
Current MPI_T support:
  - Full cvar interface.
  - Full categories interface.
  - No pvar support at this time.

This commit was SVN r28376.
2013-04-24 15:59:23 +00:00
Nathan Hjelm
c3b67d0187 Automatically generate a list of installed frameworks in project/include/project/frameworks.h
This commit was SVN r28238.
2013-03-27 21:10:32 +00:00
Jeff Squyres
cfd023bcda Ensure that MPI_LASTUSEDCODE is always >= MPI_ERR_LASTCODE. Thanks to
Dimitry Dontsov for reporting the issue and providing a patch.

This commit was SVN r28225.
2013-03-27 01:32:27 +00:00
Nathan Hjelm
36b940b685 ompi/include: Remove Makefile.include which is a duplicate of Makefile.am. This will make ompi consistent with opal and orte.
This commit was SVN r28220.
2013-03-26 18:44:01 +00:00
Ralph Castain
a4b6fb241f Remove all remaining vestiges of the Windows integration
This commit was SVN r28137.
2013-02-28 17:31:47 +00:00
Jeff Squyres
c438692fac Thanks to Brian for noticing an incorrect MPI_ERR value in the Fortran
MPI constants, which led to also find that MPI_ERR_WIN was mistakenly
not defined in the Fortran MPI constants.

This fix also needs to be applied to v1.7.  Brian -- can you review?

cmr:v1.7

This commit was SVN r28102.
2013-02-25 17:28:30 +00:00
Brian Barrett
f42783ae1a Move the RTE framework change into the trunk. With this change, all non-CR
runtime code goes through one of the rte, dpm, or pubsub frameworks.

This commit was SVN r27934.
2013-01-27 23:25:10 +00:00
Ralph Castain
6aac54b02e Revert r27510, r27509, and r27508.
Not sure what happened here, but the resulting trunk wouldn't even configure. After spending time fixing that problem, I found it wouldn't compile due to multiple syntax errors that had been introduced in both the OPAL and OMPI layer. This raised questions as to the completeness of the work.

Given that the author is departing, I pinged Jeff about it and we agreed to revert this for now. Hopefully, it can either be fixed by the author prior to actual departure, or someone else can pick it up (now that it is in the history) and fix it.

This commit was SVN r27511.

The following SVN revision numbers were found above:
  r27508 --> open-mpi/ompi@12c3c743de
  r27509 --> open-mpi/ompi@79e4a8ca38
  r27510 --> open-mpi/ompi@1ad5ff625a
2012-10-27 16:43:45 +00:00
Shiqing Fan
12c3c743de Per the MemPin RFC, submit the component source files, and update the memchecker macros.
This commit was SVN r27508.
2012-10-27 02:48:20 +00:00
Jeff Squyres
5594c90fce * Minor touch-ups to ompi/info/info.c to distinguish between keys and
vals.
 * Note that the pre-defined Info objects don't need to have fortran
   indexes assigned; they should already be assigned in the
   constructor.  So add an assert() to ensure that this really happens
   properly. 
 * Add MPI_ENV_INFO to the Fortran interfaces

This commit was SVN r27039.
2012-08-14 23:05:41 +00:00
Ralph Castain
c90b7380c1 Sigh - of course, they changed the name of the silly MPI_Info object in the final standard, but not in the proposal. So change to the new MPI_INFO_ENV name. Also, don't set unknown values to "N/A", but just leave them unset.
This commit was SVN r27012.
2012-08-12 05:00:57 +00:00
Ralph Castain
cb48fd52d4 Implement the MPI_Info part of MPI-3 Ticket 313. Add an MPI_info object MPI_INFO_GET_ENV that contains a number of run-time related pieces of info. This includes all the required ones in the ticket, plus a few that specifically address recent user questions:
"num_app_ctx" - the number of app_contexts in the job
"first_rank" - the MPI rank of the first process in each app_context
"np" - the number of procs in each app_context

Still need clarification on the MPI_Init portion of the ticket. Specifically, does the ticket call for returning an error is someone calls MPI_Init more than once in a program? We set a flag to tell us that we have been initialized, but currently never check it.

This commit was SVN r27005.
2012-08-12 01:28:23 +00:00
Jeff Squyres
7b0af8a760 Fix bad copyright comment
This commit was SVN r26999.
2012-08-10 21:53:17 +00:00
Jeff Squyres
7390ab8a23 Many updates and bug fixes for the Fortran bindings. Sorry these
aren't separated out into individual commits; they represent a few
months of work in the Mercurial branch, and it seemed error-prone to
try to break them up into multiple SVN commits.

 * Remove 2nd overloaded interfaces for MPI_TESTALL, MPI_TESTSOME,
   MPI_WAITALL, and MPI_WAITSOME in the "mpi" module implementations
   (because we're not allowed to have them, anyway -- it causes
   complications in the profiling interface).  This forced an MPI-2.2
   errata in the MPI Forum; we applied the errata here (the array of
   statuses parameter could not have a specific dimension specified in
   the dummy argument).  Fixes trac:3166.
 * Similarly, fix type for MPI_ARGVS_NULL in Fortran
 * Add MPI_3.0 function MPI_F_SYNC_REG (Fortran interfaces only).
 * Add MPI-3.0 MPI_MESSAGE_NO_PROC in the mpi_f08 module.
 * Added mpi_f08 handle comparison operators, per MPI-3.0 addendum to
   the F08 proposal at the last Forum meeting.  
 * Added missing type(MPI_File) and type(Message) in mpi_f08 module.
 * Fix --disable-mpi-io configure switch with all Fortran interfaces
 * Re-factor the Fortran header files to be fundamentally simpler and
   easier to maintain.  Fortran constant values in the header files
   are now generated by a script named mpif-values.pl during
   autogen.pl (they were previously generated by mpif-common.pl, but
   it was quite a bit more subtle/complex).  A second commit will
   follow this one to update svn:ignore values (just to ensure we
   don't muck up the first commit with the SVN client getting confused
   by the changed ignore values and new/changed files).
 * Fix some dependencies for compile ordering in
   ompi/mpi/fortran/use-mpi-ignore-tkr/Makefile.am. 
 * Fix bad wording in several places (.m4 file name, ompi_info output,
   etc.): we previoulsy said "F08 assumed shape" when we really meant
   "F08 assumed rank" (for Fortran gurus, those are very different
   things). 
 * Removed the GREEK/SVN version string from mpif.h.  It really had no
   purpose being there.

Still to be done:

 * Handling of 2D array of strings in MPI_COMM_SPAWN_MULTIPLE still
   isn't right yet.  Not sure how many people really care about this
   :-), but it is still broken.

This commit was SVN r26997.

The following Trac tickets were found above:
  Ticket 3166 --> https://svn.open-mpi.org/trac/ompi/ticket/3166
2012-08-10 21:19:47 +00:00
George Bosilca
6c39d16319 It is not redundant once the typo is corrected.
This commit was SVN r26965.
2012-08-08 11:28:36 +00:00
Jeff Squyres
7af34b1557 Remove redundant parameter declaration for MPI_COMBINER_INDEXED_BLOCK
This commit was SVN r26964.
2012-08-08 11:20:35 +00:00
George Bosilca
113b45b4e6 Add support for the new MPI_Type_create_hindexed_block (MPI 3.0).
This commit was SVN r26962.
2012-08-07 12:48:30 +00:00
Ralph Castain
89f3754559 Bring in the rest of MPI-3 Ticket #125 changes, including changes to mpi.h, function param lists, and associated documentation.
This commit was SVN r26944.
2012-08-03 01:09:59 +00:00
Ralph Castain
bf701f6c55 Make PMPI match MPI defs
This commit was SVN r26942.
2012-08-02 16:58:04 +00:00
Ralph Castain
8b595ddf84 Complete changes specified in MPI-3 Ticket #125. Still holding on proposed change to MPI_Init as it remains under discussion (and is just plain uuuugly). No action taken on changing string arrays as that part of #125 was not included in the final pdf text.
This commit was SVN r26939.
2012-08-02 16:31:02 +00:00
George Bosilca
0db06c57a1 Remove the duplicated prototype of PMPI_Reduce_scatter.
This commit was SVN r26806.
2012-07-19 13:12:42 +00:00
Ralph Castain
f3c312310d Revert r26801 so the trunk can build again
This commit was SVN r26805.

The following SVN revision numbers were found above:
  r26801 --> open-mpi/ompi@8f0525a8cc
2012-07-19 12:29:22 +00:00
George Bosilca
8f0525a8cc Fix the non-blocking collective prototypes.
This commit was SVN r26801.
2012-07-18 14:23:23 +00:00
Jeff Squyres
a1da2776ff Per RFC timeout (#3129), remove the non-standard name MPI_MAX_NAME_LEN.
This commit was SVN r26737.
2012-07-03 19:43:18 +00:00
Terry Dontje
2e014a5226 add mpif-all-common.h to the group of files to be copied as a part of a dist.
This commit was SVN r26679.
2012-06-27 15:16:44 +00:00
Josh Hursey
28681deffa Backout the ORCA commit. :(
There is a linking issue on Mac OSX that needs to be addressed before this is able to come back into the trunk.

This commit was SVN r26676.
2012-06-27 01:28:28 +00:00
Josh Hursey
542330e3a7 Commit of ORCA: Open MPI Runtime Collaborative Abstraction
This is a runtime interposition project that sits between the OMPI and ORTE layers in Open MPI.

The project is described on the wiki:
  https://svn.open-mpi.org/trac/ompi/wiki/Runtime_Interposition

And on this email thread:
  http://www.open-mpi.org/community/lists/devel/2012/06/11109.php

This commit was SVN r26670.
2012-06-26 21:42:16 +00:00
Jeff Squyres
ff5cb81faa Fix copy-n-paste error: the 2nd declarations of
PMPI_[Ir|R]educe_scatter should really have been for
PMPI_[Ir|R]educe_scatter_block.  

This commit was SVN r26663.
2012-06-26 14:05:33 +00:00
Jeff Squyres
2ec29ba8d6 Add missing file from r26652.
This commit was SVN r26661.

The following SVN revision numbers were found above:
  r26652 --> open-mpi/ompi@1923f89170
2012-06-26 13:37:49 +00:00
Jeff Squyres
dd70f84e3d Fix some linker problems with MPI_[Ir|R]educe_scatter_block:
* Ensure the profiling version is linked in
 * Ensure that PMPI variants are prototyped in mpi.h
 * Ensure weak symbols are set correctly

This commit was SVN r26649.
2012-06-25 15:26:14 +00:00
Brian Barrett
b9e8e4aeb9 * Initial merge of the non-blocking collectives interface. No implementation of
the back-end yet, coming real soon now, need to solve some tag issues first.

This commit was SVN r26641.
2012-06-22 20:54:12 +00:00
Jeff Squyres
91bae49090 A bunch of fixes to the f08 bindings:
* Add in a bunch of missinc MPI_Op pre-defined constants
 * Fix a few parameter types
 * Ensure that MPI_Op handles have the same values in all interfaces
   (i.e., add them to the mpif-common.pl generator script)

This commit was SVN r26511.
2012-05-29 17:54:33 +00:00
Jeff Squyres
245812c34b * s/f77/fortran/gi in a lot of places
* Remove unused #defines in mpi.h.in
 * Add OMPI_PARAM_CHECK in mpi.h.in (so that we can check for it in tests)
 * Clean up some comments in mpif-common.h

This commit was SVN r26347.
2012-04-27 01:09:37 +00:00
Ralph Castain
369b977e95 Include the mpif-common.pl program in the tarball so that autogen.pl can run against it - some ISVs need to be able to do so.
This commit was SVN r26326.
2012-04-24 19:49:35 +00:00
Jeff Squyres
67f9cf6952 Add missing MPI_MESSAGE_NO_PROC constant in mpif.h.
This commit was SVN r26319.
2012-04-23 21:28:50 +00:00
Jeff Squyres
4b047c4257 Fix typos in the memchecker sections of MPI_IMRECV and MPI_MRECV, and
define the missing function memchecker_message().

Thanks to MTT for catching these errors.

This commit was SVN r26314.
2012-04-23 21:10:19 +00:00
Jeff Squyres
253444c6d0 == Highlights ==
1. New mpifort wrapper compiler: you can utilize mpif.h, use mpi, and use mpi_f08 through this one wrapper compiler
 1. mpif77 and mpif90 still exist, but are sym links to mpifort and may be removed in a future release
 1. The mpi module has been re-implemented and is significantly "mo' bettah"
 1. The mpi_f08 module offers many, many improvements over mpif.h and the mpi module

This stuff is coming from a VERY long-lived mercurial branch (3 years!); it'll almost certainly take a few SVN commits and a bunch of testing before I get it correctly committed to the SVN trunk.

== More details ==

Craig Rasmussen and I have been working with the MPI-3 Fortran WG and Fortran J3 committees for a long, long time to make a prototype MPI-3 Fortran bindings implementation.  We think we're at a stable enough state to bring this stuff back to the trunk, with the goal of including it in OMPI v1.7.  

Special thanks go out to everyone who has been incredibly patient and helpful to us in this journey:

 * Rolf Rabenseifner/HLRS (mastermind/genius behind the entire MPI-3 Fortran effort)
 * The Fortran J3 committee
 * Tobias Burnus/gfortran
 * Tony !Goetz/Absoft
 * Terry !Donte/Oracle
 * ...and probably others whom I'm forgetting :-(

There's still opportunities for optimization in the mpi_f08 implementation, but by and large, it is as far along as it can be until Fortran compilers start implementing the new F08 dimension(..) syntax.

Note that gfortran is currently unsupported for the mpi_f08 module and the new mpi module.  gfortran users will a) fall back to the same mpi module implementation that is in OMPI v1.5.x, and b) not get the new mpi_f08 module.  The gfortran maintainers are actively working hard to add the necessary features to support both the new mpi_f08 module and the new mpi module implementations.  This will take some time.

As mentioned above, ompi/mpi/f77 and ompi/mpi/f90 no longer exist.  All the fortran bindings implementations have been collated under ompi/mpi/fortran; each implementation has its own subdirectory:

{{{
ompi/mpi/fortran/
  base/               - glue code
  mpif-h/             - what used to be ompi/mpi/f77
  use-mpi-tkr/        - what used to be ompi/mpi/f90
  use-mpi-ignore-tkr/ - new mpi module implementation
  use-mpi-f08/        - new mpi_f08 module implementation
}}}

There's also a prototype 6-function-MPI implementation under use-mpi-f08-desc that emulates the new F08 dimension(..) syntax that isn't fully available in Fortran compilers yet.  We did that to prove it to ourselves that it could be done once the compilers fully support it.  This directory/implementation will likely eventually replace the use-mpi-f08 version.

Other things that were done:

 * ompi_info grew a few new output fields to describe what level of Fortran support is included
 * Existing Fortran examples in examples/ were renamed; new mpi_f08 examples were added
 * The old Fortran MPI libraries were renamed:
   * libmpi_f77 -> libmpi_mpifh
   * libmpi_f90 -> libmpi_usempi
 * The configury for Fortran was consolidated and significantly slimmed down.  Note that the F77 env variable is now IGNORED for configure; you should only use FC. Example:
{{{
shell$ ./configure CC=icc CXX=icpc FC=ifort ...
}}}

All of this work was done in a Mercurial branch off the SVN trunk, and hosted at Bitbucket.  This branch has got to be one of OMPI's longest-running branches.  Its first commit was Tue Apr 07 23:01:46 2009 -0400 -- it's over 3 years old!  :-)  We think we've pulled in all relevant changes from the OMPI trunk (e.g., Fortran implementations of the new MPI-3 MPROBE stuff for mpif.h, use mpi, and use mpi_f08, and the recent Fujitsu Fortran patches).

I anticipate some instability when we bring this stuff into the trunk, simply because it touches a LOT of code in the MPI layer in the OMPI code base.  We'll try our best to make it as pain-free as possible, but please bear with us when it is committed.

This commit was SVN r26283.
2012-04-18 15:57:29 +00:00
Jeff Squyres
16263cde4b Remove a few more vestiages of C++ MPI extensions support
This commit was SVN r26240.
2012-04-05 21:17:56 +00:00
Jeff Squyres
91b80630aa Update MPROBE, IMPROBE, MRECV, IMRECV with the behavior described in
MPI-3 ticket 328:
https://svn.mpi-forum.org/trac/mpi-forum-web/ticket/328.  Add
MPI_MESSAGE_NO_PROC constant.

This commit was SVN r26115.
2012-03-08 13:27:01 +00:00
Brian Barrett
25d48e22fa Implementation of the MPI-3 Matched Probe functionality. Currently only
implemented in the OB1 PML, will return NOT_SUPPORTED in other PMLs.

This commit was SVN r25865.
2012-02-06 17:35:21 +00:00
Jeff Squyres
feb8eb8a90 Add the new MPI-3 function MPI_GET_LIBRARY_VERSION.
This commit was SVN r25860.
2012-02-02 23:57:09 +00:00
Brian Barrett
b2411fe131 Add support for MPI-3's MPI_COMM_SPLIT_TYPE function
This commit was SVN r25738.
2012-01-18 23:35:21 +00:00
Ralph Castain
6310361532 At long last, the fabled revision to the affinity system has arrived. A more detailed explanation of how this all works will be presented here:
https://svn.open-mpi.org/trac/ompi/wiki/ProcessPlacement

The wiki page is incomplete at the moment, but I hope to complete it over the next few days. I will provide updates on the devel list. As the wiki page states, the default and most commonly used options remain unchanged (except as noted below). New, esoteric and complex options have been added, but unless you are a true masochist, you are unlikely to use many of them beyond perhaps an initial curiosity-motivated experimentation.

In a nutshell, this commit revamps the map/rank/bind procedure to take into account topology info on the compute nodes. I have, for the most part, preserved the default behaviors, with three notable exceptions:

1. I have at long last bowed my head in submission to the system admin's of managed clusters. For years, they have complained about our default of allowing users to oversubscribe nodes - i.e., to run more processes on a node than allocated slots. Accordingly, I have modified the default behavior: if you are running off of hostfile/dash-host allocated nodes, then the default is to allow oversubscription. If you are running off of RM-allocated nodes, then the default is to NOT allow oversubscription. Flags to override these behaviors are provided, so this only affects the default behavior.

2. both cpus/rank and stride have been removed. The latter was demanded by those who didn't understand the purpose behind it - and I agreed as the users who requested it are no longer using it. The former was removed temporarily pending implementation.

3. vm launch is now the sole method for starting OMPI. It was just too darned hard to maintain multiple launch procedures - maybe someday, provided someone can demonstrate a reason to do so.

As Jeff stated, it is impossible to fully test a change of this size. I have tested it on Linux and Mac, covering all the default and simple options, singletons, and comm_spawn. That said, I'm sure others will find problems, so I'll be watching MTT results until this stabilizes.

This commit was SVN r25476.
2011-11-15 03:40:11 +00:00
George Bosilca
78751b3b2d Put back the OPI errors after the ORTE one.
This commit was SVN r25333.
2011-10-19 20:57:13 +00:00
George Bosilca
efd88e10d7 Cleanup the error codes. Get rid of all the useless ones, and
mark the distinction between ORTE and OMPI errors.

This commit was SVN r25323.
2011-10-19 03:51:53 +00:00
George Bosilca
80c02647c8 Each level (OPAL/ORTE/OMPI) should only return it's own constants,
instead of the current mismatch.

This commit was SVN r25230.
2011-10-04 14:50:31 +00:00
Jeff Squyres
b05ca7c76b Only build the f90 ext stuff if we're also building the f90 bindings
(e.g., cover the case where the f90 bindings are not being built
because you don't have an f90 compiler)

This commit was SVN r24827.
2011-06-27 20:39:11 +00:00
Jeff Squyres
90aa9ff09a Fix problem that causes make dist to barf
This commit was SVN r24773.
2011-06-11 18:11:17 +00:00
Josh Hursey
0833734fcf Add support for F77/F90 in the Open MPI extensions interface system.
Per RFC from OMPI Devel list:
 * http://www.open-mpi.org/community/lists/devel/2011/06/9324.php

This commit was SVN r24772.
2011-06-10 20:03:06 +00:00
Jeff Squyres
3f4d4886f2 Minor update for something that has been bugging me for quite a while:
OMPI supports multiple different repository systems (SVN, hg, git).
But the VERSION file has listed "want_svn" and "svn_r" as fields, even
though the actual repo system and version may not be SVN.

So search/replace those fields (and derrivative values that come from
those fields) with "want_repo_rev" and "repo_rev", respectively.

This commit was SVN r24405.
2011-02-16 22:53:23 +00:00
Jeff Squyres
5bc2ad2b44 Fix some deprecated notices to refer to the correct new function names
This commit was SVN r24313.
2011-01-27 19:55:42 +00:00
George Bosilca
5390fd6f33 Reshape the datatype engine. The basic types are built down in OPAL. MPI types are
either direct link to these basic predefined types, or a combination of them.
Anyway, the first items in the datatype list belong to OPAL, the second round
are MPI datatypes created by composing basic OPAL datatypes, and the last
batch are mapped datatype (direct correspondance between an OMPI datatype and
an OPAL one such as int -> int32_t).

Modify the op to fit this new scheme.

This commit was SVN r24247.
2011-01-13 06:08:54 +00:00
Jeff Squyres
741ba6518b Install ompi_config.h (and friends) into /openmpi, not /openmpi/ompi/include. This is consistent with prior releases and the OPAL and ORTE <foo>_config.h file installation locations.
This commit was SVN r24180.
2010-12-15 20:54:22 +00:00
Shiqing Fan
482a621e31 Change the behavior of exporting/importing symbols on Windows, so that to fit the new build procedure, i.e. import statically linked opal/orte libraries for other libraries/binaries. There are several use cases when creating dll libraries:
1. create DLL A, export symbols of A, import nothing  (A normally is OPAL)
   should define _USRDLL , A_EXPORT 

2. create DLL B, export symbols of B, import A.lib    (B could be ORTE, OMPI or other ompi tools)
   should define _USRDLL, B_EXPORT

3. create DLL C, import B.dll    (C could be external libs or apps)
   should define B_IMPORT

This commit was SVN r24016.
2010-11-09 16:13:30 +00:00
Jeff Squyres
73bcc4a36b Fix mistake that came in via the ompi-agen tree in r23764. The mistake wasn't part of the core autogen upgrade; it was an additional 'bonus' cleanup. Oops. The mistake will always create a set of directories under installdir, even if you do not --with-devel-headers. The set of directories will be empty, but still -- they should not be there at all. This commit fixes that -- the directories are not created at all if you do not --with-devel-headers
This commit was SVN r23801.

The following SVN revision numbers were found above:
  r23764 --> open-mpi/ompi@40a2bfa238
2010-09-24 22:53:28 +00:00
Ralph Castain
40a2bfa238 WARNING: Work on the temp branch being merged here encountered problems with bugs in subversion. Considerable effort has gone into validating the branch. However, not all conditions can be checked, so users are cautioned that it may be advisable to not update from the trunk for a few days to allow MTT to identify platform-specific issues.
This merges the branch containing the revamped build system based around converting autogen from a bash script to a Perl program. Jeff has provided emails explaining the features contained in the change.

Please note that configure requirements on components HAVE CHANGED. For example. a configure.params file is no longer required in each component directory. See Jeff's emails for an explanation.

This commit was SVN r23764.
2010-09-17 23:04:06 +00:00
Jeff Squyres
51a051b072 This commit, along with r23467, r23468, r23470, r23471 should fix #2241.
This commit:

 * Adds the configury to figure out how many Fortran INTEGERs are 
   necessary to represent the C MPI_Status (which now includes a size_t
   member).
 * Sets MPI_STATUS_SIZE to this value in mpif-config.h.in.
 * Adds a big comment in status_c2f.c explaining why the no changes 
   were necessary to how we copy statuses between Fortran and C.

This commit was SVN r23472.

The following SVN revision numbers were found above:
  r23467 --> open-mpi/ompi@733d25a8a3
  r23468 --> open-mpi/ompi@963fcb13a5
  r23470 --> open-mpi/ompi@418b989781
  r23471 --> open-mpi/ompi@bc74a446ac
2010-07-22 02:23:47 +00:00
Jeff Squyres
bc74a446ac Add some comments to reinforce the fact that MPI applications should not be using the non-public members of ompi_status_public_t. Refs trac:2241.
This commit was SVN r23471.

The following Trac tickets were found above:
  Ticket 2241 --> https://svn.open-mpi.org/trac/ompi/ticket/2241
2010-07-22 01:59:33 +00:00
George Bosilca
733d25a8a3 First step toward fixing the MPI_Get_count issues from the ticket #2241. Next
step is the configure and Fortran mojo that Jeff will put in. Until then I
guess the Fortran interface is broken (at least all functions using the hidden
count firld in the MPI_Status).

This commit was SVN r23467.
2010-07-21 20:07:00 +00:00
Shiqing Fan
3a3018deef Convert the line endings for the added header files. They were changed automatically by Windows when adding new files.
This commit was SVN r22634.
2010-02-16 17:24:44 +00:00
Shiqing Fan
08ffdbe987 Changes for portable platform headers. Commit it on behalf of Ralph.
This commit was SVN r22619.
2010-02-15 22:14:59 +00:00
Jeff Squyres
dafc0c914b Restoring the build for now.
This commit was SVN r22611.
2010-02-12 12:03:17 +00:00
Rainer Keller
48254c78c9 - When svn version string becomes too long (>72 columns) some Fortran
compilers get confused. Continue on the next line.
   Thanks to Richard Tran Mills for noticing that.

This commit was SVN r22609.
2010-02-11 23:23:36 +00:00
Rainer Keller
3ca8adb540 - The only differences in the underlying header file between
GASNet-1.12.0  and  GASNet-1.14.0.

This commit was SVN r22591.
2010-02-10 14:07:44 +00:00
Jeff Squyres
bf6e3d4355 Fixes trac:2061: add MPI_OP_COMMUTATIVE.
This commit was SVN r22128.

The following Trac tickets were found above:
  Ticket 2061 --> https://svn.open-mpi.org/trac/ompi/ticket/2061
2009-10-22 21:46:05 +00:00
Jeff Squyres
c78df0d1b4 Fixes trac:2060: MPI-2.2 ticket 7, convert some function pointer typedefs
from "MPI_*_errhandler_fn" to "MPI_*_errhandler_function" (and their
corresponding C++ types, too).  Also updated the corresponding man
pages, and marked the typedefs to the now-deprecated types as
deprecated.

This commit was SVN r22122.

The following Trac tickets were found above:
  Ticket 2060 --> https://svn.open-mpi.org/trac/ompi/ticket/2060
2009-10-22 16:50:45 +00:00
Jeff Squyres
7145b95bd8 Refs trac:2032. Add comment explaining why we have MPI_LOGICALx datatypes
in fortran.

This commit was SVN r22024.

The following Trac tickets were found above:
  Ticket 2032 --> https://svn.open-mpi.org/trac/ompi/ticket/2032
2009-09-28 15:45:57 +00:00
Rainer Keller
8e1b23779f - Replace combinations of
#if defined (c_plusplus)
          defined (__cplusplus)
   followed by
      extern "C" {
   and the closing counterpart by BEGIN_C_DECLS and END_C_DECLS.

   Notable exceptions are:
    - opal/include/opal_config_bottom.h:
      This is our generated code, that itself defines BEGIN_C_DECL and
      END_C_DECL
    - ompi/mpi/cxx/mpicxx.h:
      Here we do not include opal_config_bottom.h:                                 
    - Belongs to external code:                                                    
      opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.c        
      opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.h        
    - opal/include/opal/prefetch.h:
      Has C++ specific macros that are protected:                                  

    - Had #if ... } #endif  _and_ END_C_DECLS (aka end up with 2x
      END_C_DECLS)
      ompi/mca/btl/openib/btl_openib.h
    - opal/event/event.h has #ifdef __cplusplus as BEGIN_C_DECLS...
    - opal/win32/ompi_process.h: had extern "C"\n {...
      opal/win32/ompi_process.h: dito
    - ompi/mca/btl/pcie/btl_pcie_lex.l: needed to add *_C_DECLS
      ompi/mpi/f90/test/align_c.c: dito
    - ompi/debuggers/msgq_interface.h: used #ifdef __cplusplus
    - ompi/mpi/f90/xml/common-C.xsl: Amend

   Tested on linux using --with-openib and --with-mx

   The following do not contain either opal_config.h, orte_config.h or
   ompi_config.h
   (but possibly other header files, that include one of the above):
      ompi/mca/bml/r2/bml_r2_ft.h
      ompi/mca/btl/gm/btl_gm_endpoint.h
      ompi/mca/btl/gm/btl_gm_proc.h
      ompi/mca/btl/mx/btl_mx_endpoint.h
      ompi/mca/btl/ofud/btl_ofud_endpoint.h
      ompi/mca/btl/ofud/btl_ofud_frag.h
      ompi/mca/btl/ofud/btl_ofud_proc.h
      ompi/mca/btl/openib/btl_openib_mca.h
      ompi/mca/btl/portals/btl_portals_endpoint.h
      ompi/mca/btl/portals/btl_portals_frag.h
      ompi/mca/btl/sctp/btl_sctp_endpoint.h
      ompi/mca/btl/sctp/btl_sctp_proc.h
      ompi/mca/btl/tcp/btl_tcp_endpoint.h
      ompi/mca/btl/tcp/btl_tcp_ft.h
      ompi/mca/btl/tcp/btl_tcp_proc.h
      ompi/mca/btl/template/btl_template_endpoint.h
      ompi/mca/btl/template/btl_template_proc.h
      ompi/mca/btl/udapl/btl_udapl_eager_rdma.h
      ompi/mca/btl/udapl/btl_udapl_endpoint.h
      ompi/mca/btl/udapl/btl_udapl_mca.h
      ompi/mca/btl/udapl/btl_udapl_proc.h
      ompi/mca/mtl/mx/mtl_mx_endpoint.h
      ompi/mca/mtl/mx/mtl_mx.h
      ompi/mca/mtl/psm/mtl_psm_endpoint.h
      ompi/mca/mtl/psm/mtl_psm.h
      ompi/mca/pml/cm/pml_cm_component.h
      ompi/mca/pml/csum/pml_csum_comm.h
      ompi/mca/pml/dr/pml_dr_comm.h
      ompi/mca/pml/dr/pml_dr_component.h
      ompi/mca/pml/dr/pml_dr_endpoint.h
      ompi/mca/pml/dr/pml_dr_recvfrag.h
      ompi/mca/pml/example/pml_example.h
      ompi/mca/pml/ob1/pml_ob1_comm.h
      ompi/mca/pml/ob1/pml_ob1_component.h
      ompi/mca/pml/ob1/pml_ob1_endpoint.h
      ompi/mca/pml/ob1/pml_ob1_rdmafrag.h
      ompi/mca/pml/ob1/pml_ob1_recvfrag.h
      ompi/mca/pml/v/pml_v_output.h
      opal/include/opal/prefetch.h
      opal/mca/timer/aix/timer_aix.h
      opal/util/qsort.h
      test/support/components.h

This commit was SVN r21855.

The following SVN revision numbers were found above:
  r2 --> open-mpi/ompi@58fdc18855
2009-08-20 11:42:18 +00:00
Rainer Keller
9a0b6ef71e - For now fixup our headers for known issue of Sun Studio 12.1 compiler
"...", line XXX: warning: linker scope was specified more than once:

This commit was SVN r21853.
2009-08-20 11:12:45 +00:00
Rainer Keller
c971c09eb6 - Runtime and include files missed in last commit
This commit was SVN r21642.
2009-07-13 04:59:13 +00:00
Shiqing Fan
5b4b8f8899 Get rid of a bunch of compiler warnings on Windows.
This commit was SVN r21536.
2009-06-26 07:51:39 +00:00
Jeff Squyres
b363fc2a6b Per the discussion yesterday, remove all use of MPI_Flogical -- it's
not an official MPI type, so it shouldn't be named that way.  Instead,
use ompi_fortran_logical_t.

This commit was SVN r21353.
2009-06-02 12:04:17 +00:00
Rainer Keller
b572dc3591 - As discussed revert r21330, Fortran-configure info should
not end up in OPAL
 - Will post an updated patch for the OMPI_ALIGNMENT_ parts (within C).

This commit was SVN r21342.

The following SVN revision numbers were found above:
  r21330 --> open-mpi/ompi@95596d1814
2009-06-01 19:02:34 +00:00
Jeff Squyres
055b50213b A slightly better way to fix the problem noted in r21137.
This commit was SVN r21339.

The following SVN revision numbers were found above:
  r21137 --> open-mpi/ompi@f6da7d86a2
2009-06-01 13:58:37 +00:00
Josh Hursey
1fef44085b As a result of r21308, if we are building with "--disable-mpi-io " make sure that MPI_MAX_DATAREP_STRING is defined in mpi.h
MTT caught builds failing with the following error which flagged the problem:
{{{
param.cc:802: error: ‘MPI_MAX_DATAREP_STRING’ was not declared in this scope
}}}

This commit was SVN r21337.

The following SVN revision numbers were found above:
  r21308 --> open-mpi/ompi@2f9765926e
2009-06-01 12:44:53 +00:00
Rainer Keller
95596d1814 - Move alignment and size output generated by configure-tests
into the OPAL namespace, eliminating cases like opal/util/arch.c
   testing for ompi_fortran_logical_t.
   As this is processor- and compiler-related information
   (e.g. does the compiler/architecture support REAL*16)
   this should have been on the OPAL layer.
 - Unifies f77 code using MPI_Flogical instead of opal_fortran_logical_t

 - Tested locally (Linux/x86-64) with mpich and intel testsuite
   but would like to get this week-ends MTT output


 - PLEASE NOTE: configure-internal macro-names and
   ompi_cv_ variables have not been changed, so that
   external platform (not in contrib/) files still work.

This commit was SVN r21330.
2009-05-30 15:54:29 +00:00
Josh Hursey
1c58367f8b Fix for makedistcheck. Make sure that distclean removes the mpi-ext.h file that is automaticly generated at configure time.
This commit was SVN r21293.
2009-05-27 14:05:04 +00:00
Rainer Keller
51e2b5dcef - Make the maximum length user strings configurable... Namely
MPI_MAX_PROCESSOR_NAME
      MPI_MAX_ERROR_STRING
      MPI_MAX_OBJECT_NAME
      MPI_MAX_INFO_KEY
      MPI_MAX_INFO_VAL
      MPI_MAX_PORT_NAME
      MPI_MAX_DATAREP_STRING

   Defaults stay as theyr currently are -- and now give an explanation on the
   min/max values being used in a central place...
   m4-macro _OPAL_WITH_OPTION_MIN_MAX_VALUE may be benefical in other parts
   of the configure system.

 - We need some of these in the lower level OPAL for an upcoming commit!
   All other levels base their values on them.

This commit was SVN r21292.
2009-05-27 12:54:40 +00:00
Rainer Keller
88390b0d7c - Just remove white-space at end of lines
This commit was SVN r21291.
2009-05-27 12:46:04 +00:00
Rainer Keller
653656f012 - Hey, as of r19461, we're officially endorse MPI-2.1
... even in Fortran ;-)

This commit was SVN r21284.

The following SVN revision numbers were found above:
  r19461 --> open-mpi/ompi@008fa8c5cc
2009-05-27 00:32:23 +00:00
Josh Hursey
3e847c19f0 Per RFC: MPI Interface Extensions Infrastructure
Add infrastructure for MPI Interface Extensions. This allows a developer to create new MPI interfaces that are non-standard.

The following email thread describes the functionality proposed in the RFC:
  http://www.open-mpi.org/community/lists/devel/2009/05/5997.php

The following wiki page describes how to use and enable the extensions:
  https://svn.open-mpi.org/trac/ompi/wiki/MPIExtensions

This commit was SVN r21272.
2009-05-26 20:49:35 +00:00
Rainer Keller
916eb1fb1e - As proposed in RFC and telcon, warn the user about deprecated
functionality (per MPI-2.1). This warning can be toggled using
   --enable-mpi-interface-warning (default OFF), but can be
   selectively turned on passing
       mpicc -DOMPI_WANT_MPI_INTERFACE_WARNING

   Using icc, gcc < 4.5, warnings (such as in mpi2basic_tests) show:
     type_vector.c:83: warning: ‘MPI_Type_hvector’ is deprecated
     (declared at /home/../usr/include/mpi.h:1379)

   Using gcc-4.5 (gcc-svn) these show up as:
     type_vector.c:83: warning: ‘MPI_Type_hvector’ is deprecated
     (declared at /home/../usr/include/mpi.h:1379):
     MPI_Type_hvector is superseded by MPI_Type_create_hvector in MPI-2.0


   Jeff and I propose to turn such warnings on with Open MPI-1.7 by default.


 - Detection of user-level compiler is handled using the preprocessor
   checks of GASnet's other/portable_platform.h (thanks to Paul Hargrove
   and Dan Bonachea) adapted into ompi/include/mpi_portable_platform.h
   (see comments).

   The OMPI-build time detection is output (Familyname and Version)
   with ompi_info.

   This functionality (actually any upcoming __attribute__) are turned
   off, if a different compiler (and version) is being detected.


 - Note, that any warnings regarding (user-compiler!=build-compiler)
   as discussed in the RFC are _not_ included for now.


 - Tested on Linux with --enable-mpi-interface-warning on
   Linux, gcc-4.5 (deprecated w/ specific msg)
   Linux, gcc-4.3 (deprecated w/o specific msg)
   Linux, pathscale 3.1 (deprecated w/o specific msg)
   Linux, icc-11.0 (deprecated w/o specific msg)

   Linux, PGI-8.0.6 accepts __deprecated__ but does not issue a warning,
   further investigation needed...

This commit was SVN r21262.
2009-05-22 04:39:43 +00:00
Greg Koenig
60485ff95f This is a very large change to rename several #define values from
OMPI_* to OPAL_*.  This allows opal layer to be used more independent
from the whole of ompi.

NOTE: 9 "svn mv" operations immediately follow this commit.

This commit was SVN r21180.
2009-05-06 20:11:28 +00:00