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Граф коммитов

3884 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
51240394a7 usnic: ensure to init module->av_eq_num 2016-02-06 03:28:47 -08:00
Jeff Squyres
89eea51075 usnic: fix calculation for number of blocks 2016-02-02 16:56:34 -08:00
Jeff Squyres
d812695201 verbs: fix typo 2016-02-02 14:23:45 -08:00
Jeff Squyres
2cf9b26d34 verbs_usnic: previous commit missed a symbol
0715802f52 missed that there is a call
to a common/verbs_usnic symbol in the common/verbs component.  This
call needs to be compiled out when the common/verbs_usnic component is
not built.
2016-02-02 14:05:59 -08:00
Nathan Hjelm
a016c17714 Merge pull request #1338 from hjelmn/ugni_threading
UNGI threading fixes
2016-02-02 13:22:57 -07:00
Jeff Squyres
0715802f52 verbs_usnic: do not build by default
This component is a workaround to a bug in libibverbs that prints a
dire warning that usNIC devices are not supported (of course not --
usNIC devices provide functionality through libfabric, not
libibverbs).  This component was written before a better workaround
was created: a "no op" libibverbs plugin for usNIC devices
(https://github.com/cisco/libusnic_verbs, and is also available in
binary form on cisco.com).

Hence, this component no longer builds by default.  It's still
available if a user specifically asks for it (e.g., if they do not
want to install the "no op" libibverbs plugin), but it's not the
default.  This component also has the side-effect of making
libopen-pal.so depend on libibverbs.so, which can be annoying for
packagers (which is another reason it isn't built by default any
more).
2016-02-02 11:22:04 -08:00
Nathan Hjelm
cd11fc3081 btl/ugni: fix race condition that causes completions to be dropped
The send code in the ugni btl has an optimization that enables it to
return 1 (fragment gone) in some cases. This optimization involved
removing the btl ownership and callback flags to ensure the fragment
stuck around long enough for its completion flag to be checked. This
works fine for the single-threaded case but not in the multi-threaded
case. It is possible that a fragment will be completed by another
thread while a thread is in mca_btl_ugni_send. This competition can
lead to a leaked fragment, missed callback, or both. To fix the issue
without removing the optimization a reference count has been added to
the fragment. Callbacks and fragment release will not be made until
the fragment reference count has reach 0. The count is incremented
before sending the frag and decremented after the completion flag has
been checked. The fix has been verified to work using a multi-threaded
RMA benchmark with the osc/pt2pt component.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-02-02 12:14:31 -07:00
Nathan Hjelm
14704201e2 btl/ugni: fix race condition when adding endpoint to wait list
This commit fixes a race condition that can cause an endpoint to be
added to the wait list multiple times. To fix the issue an additional
check has been added to ensure the endpoint is not on the wait list
after the wait list lock is held. The wait list processing code has
also been updated to keep the wait list lock until all wait listed
endpoints have been handled. This reduces the chance that an endpoint
that is being processed by the wait list code is not re-added to the
list by a competing send.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-02-02 12:13:49 -07:00
Jeff Squyres
9f3ed00125 usnic: minor updates from code review
Three minor updates from the code review of
https://github.com/open-mpi/ompi-release/pull/933:

* Remove an extra blank line a show_help message
* We no longer allow -1 for the MCA param btl_usnic_av_eq_num, so
  change the flag to REGINT_GE_ONE
* Change "num_blocks" definition to be in terms of block_len (not
  eq_size)
2016-02-01 11:14:30 -08:00
Jeff Squyres
c2615a4732 usnic: change retrans timeout to 5ms
A bunch of empirical testing has shown that increasing the retranmit
timeout from 1ms to 5ms doesn't adversely affect performance, yet
decreases the number of gratuitious retransmissions.
2016-01-30 10:49:14 -08:00
Jeff Squyres
797d5026c8 usnic: better av_eq_num default value handling 2016-01-30 10:46:14 -08:00
Jeff Squyres
db825abc00 usnic: don't overrun the fi_av_insert() EQ
Add endpoints in a blocked manner so that we don't overrun the
fi_av_insert() event queue.  Also make the AV EQ length an MCA param,
and report it in mca_btl_base_verbose >=5 output.
2016-01-30 08:33:48 -08:00
Jeff Squyres
d624e0d60f usnic: fix wraparound sequence number issue
Sequence numbers will wrap around; it is not sufficient to check for
(seq-1) -- must use the SEQ_DIFF macro to properly handle the
wraparound.

This bug wasn't serious; it just meant we might retransmit one or two
extra times when retransmits were triggerd and the sequence numbers
wrapped around their sliding windows.
2016-01-30 08:32:13 -08:00
Jeff Squyres
4de4a263f5 usnic: ensure all messages are sent on the data channel
Messages should go on the data channel, even if they're short.  Only
ACKs go on the priority channel.
2016-01-30 08:31:21 -08:00
Gilles Gouaillardet
d529951206 hwloc: correctly count cores with at least one allowed PU
when SMT is enabled, a core must be counted as long as one of its hwthread is allowed

Thanks Ben Menadue for the report.

This fixes a regression from open-mpi/ompi@6d149554a7
2016-01-29 11:54:34 +09:00
Edgar Gabriel
3f7fff5780 Merge pull request #1331 from edgargabriel/solaris-statfs-fix
Solaris statfs fix
2016-01-28 20:16:33 -06:00
Gilles Gouaillardet
f5a53b5f1e pmix: fix Makefile.am to correctly exclude autogenerated file from tarball
(back-ported from pmix/master@73daf58ee5)
2016-01-28 11:42:03 +09:00
Edgar Gabriel
722aab92e6 - extend opal_path_nfs to retrieve the file system type
- use opal_path_nfs in the fs_base function to avoid code duplication.
2016-01-26 13:36:21 -06:00
Gilles Gouaillardet
6d149554a7 hwloc: have opal_hwloc_base_get_pu search for HWLOC_OBJ_PU when mpirun is invoked with --use-hwthread-cpus
Fixes open-mpi/ompi#1247
2016-01-26 18:10:33 +09:00
Gilles Gouaillardet
15e26da1e1 pmix configury: add missing PMIX_CHECK_ICC_VARARGS function
Thanks Paul Hargrove for the report

(back-ported from pmix/master@7b16e914bf)
2016-01-26 10:57:16 +09:00
rhc54
b172b8599b Merge pull request #1285 from ggouaillardet/topic/pmix_dist_fix
pmix: do not include automatically generated include/private/autogen/…
2016-01-16 20:49:41 -08:00
Ralph Castain
4dad5de8ff Silence a couple of warnings - strncpy returns a char*, not an int 2016-01-16 09:44:52 -08:00
Jeff Squyres
348ac507c2 usnic: explain why we still have OPAL_HAVE_HWLOC
Put in a comment explaining why btl_usnic_compat.h still defines
OPAL_HAVE_HWLOC, even though master/v2.x no longer does.
2016-01-16 04:11:05 -08:00
Jeff Squyres
0f5fcf9029 usnic: fix common symbol 2016-01-16 03:55:27 -08:00
Jeff Squyres
60ffe713b8 common syms: whitelist bison-generated common symbols
Bison generates some common symbols that we can't do anything about,
so whitelist them.
2016-01-16 03:53:14 -08:00
Tim Mattox
958de82471 hwloc_base_util.c: Remove newly unused variable 'i'. 2016-01-14 16:35:47 -05:00
Gilles Gouaillardet
1d38430e43 opal: replace opal_convert_jobid_to_string with opal_snprintf_jobid 2016-01-14 10:39:03 +09:00
Jeff Squyres
270cc11156 opal hotel: only delete events that have not yet fired
The eviction callback, for convenience (and to avoid code
duplication), use to call opal_hotel_checkout().  However,
opal_hotel_checkout() deletes the eviction event -- which is fine to
do when opal_hotel_checkout() is invoked by the application.  But when
it's invoked by the same event that it's deleting, it can cause Bad
Things to happen.

For simplicity, instead of invoking opal_hotel_checkout() from the
eviction callback, just duplicate the checkout logic into the eviction
callback function (and skip the delete-the-evict-event part).

For good measure, put a comment in all three places where the checkout
logic occurs (because it's inlined): don't change this logic without
changing all 3 places.

Finally, also add a line in the docs for opal_hotel_init() warning
users from calling opal_hotel_checkout() from their eviction
callback.
2016-01-13 10:59:06 -08:00
Tim Mattox
f2d4a8d266 Replace a bit counting loop with a call to an efficient population count routine 2016-01-12 10:48:56 -05:00
Gilles Gouaillardet
955fe85cb6 pmix/pmix120: add missing include file 2016-01-12 11:35:32 +09:00
Nathan Hjelm
aefc2ed3e8 Merge pull request #1283 from artpol84/udcm_race_fix
Fix race condition in UDCM
2016-01-09 08:19:20 -07:00
Gilles Gouaillardet
0fb7b07a71 opal/progress: fix non debug builds
this bug was introduced in open-mpi/ompi@64b695669a

Thanks Pavel (Pasha) Shamis for reporting this issue
2016-01-09 15:47:40 +09:00
Artem Polyakov
84e4fb308b Fix race condition in UDCM where service thread sees that
`cm_message_event_active == 1` but main thread has already stopped
processing messages and thus we will have the situation where one
message was left unhandled leading to a hang.
2016-01-08 23:56:21 +06:00
Gilles Gouaillardet
73daf58ee5 pmix: do not include automatically generated include/private/autogen/config.h into dist tarball
Thanks Siegmar Gross for the initial report of this issue
2016-01-08 13:18:15 +09:00
Nathan Hjelm
15007b4e2b linux: use mntent.h instead of manually parsing /proc/mounts
setmntent() doesn't support root_fd, but manual parsing of
/proc/mounts is fragile, and actually buggy for very long mount lines
(see open-mpi/hwloc#142 (comment)).

Since we only openat("/proc/mounts") there, just manually concatenate
the fsroot_path and use setmntent().

Thanks to Nathan Hjelm for the report.

(Cherry-picked from open-mpi/hwloc@d2d07b9a22)

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-01-07 12:55:03 -07:00
Nathan Hjelm
1384559fcd Update hwloc to v1.11.2
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-01-07 12:33:12 -07:00
Nysal Jan K.A
13f9bb9202 Use PMI2 constants for consistency 2016-01-07 11:46:22 +05:30
Jeff Squyres
e4bdad09c1 pmix: remove extra wrapper LIBS
These extra libs are now no longer necessary.

Fixes open-ompi/ompi#1281.
2016-01-05 12:09:53 -08:00
Jeff Squyres
6d073a8da4 btl_sm: add a comment explaining why we rename(2)
Per open-mpi/ompi#1230, add a comment explaining why we write to a
temporary file and then rename(2) the file, just so that future code
maintainers don't wonder why we do this seemingly-useless step.
2016-01-04 14:51:52 -05:00
Artem Polyakov
d80b98be98 Merge pull request #1268 from artpol84/fix_mlnx_copy
Fix Mellanox copyrights with respect to the following PRs
2016-01-02 09:57:12 +05:00
Ralph Castain
0a6b8d2c14 Correctly handle connection terminations during finalize so mpirun doesn't hang. Cleanup some corner cases in the error notification system 2015-12-30 07:16:43 -08:00
Ralph Castain
a04f1cd643 Silence some Coverity warnings 2015-12-29 20:37:25 -08:00
Artem Polyakov
2abb2972ac Fix Mellanox copyrights with respect to the following PRs:
* https://github.com/open-mpi/ompi/pull/1184
* https://github.com/open-mpi/ompi/pull/1188
* https://github.com/open-mpi/ompi/pull/1197
* https://github.com/open-mpi/ompi/pull/1202
* https://github.com/open-mpi/ompi/pull/1210
* https://github.com/open-mpi/ompi/pull/1216
* https://github.com/open-mpi/ompi/pull/1236
* https://github.com/open-mpi/ompi/pull/1237
* https://github.com/open-mpi/ompi/pull/1248
* https://github.com/open-mpi/ompi/pull/1260
* https://github.com/open-mpi/ompi/pull/1264
2015-12-30 00:12:19 +06:00
Gilles Gouaillardet
b20a219ad0 hwloc/external: abort if hwloc v2 is detected since it is not yet supported 2015-12-29 09:23:27 +09:00
Gilles Gouaillardet
0ca1ee5156 configury: misc pmix120 fixes 2015-12-28 23:17:41 +09:00
Gilles Gouaillardet
3300d7cc00 pmix: rename pmix_munge_module 2015-12-28 23:16:27 +09:00
Ralph Castain
a5b95a0939 Continue work on error notification system 2015-12-28 23:15:59 +09:00
Ralph Castain
810f2446b7 Add pmix120 component, update the error handling functions in the PMIx API.
Update the configure logic for the new pmix120 component

ckpt

Get the pmix120 component to work - still not really registering or handling notifications, but infrastructure now operates

Cleanup some of the symbol scopes, and provide a more comprehensive rename.h file. Will pretty it up later - let's see how this works

Cleanup the rename files to use the pretty macros
2015-12-28 23:15:44 +09:00
Gilles Gouaillardet
c757c5c612 pmix/external: Fix error handler usage 2015-12-28 23:15:17 +09:00
Gilles Gouaillardet
1157329732 configury: misc pmix112 fixes 2015-12-28 23:15:16 +09:00