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Граф коммитов

96 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
a0d5c80ce0 Add a new framework for discovering local resource information such as cpu type/model, #cpus, available physical memory, etc. Two initial components (darwin and linux) are provided. This is needed to support bootstrap operations where daemons are started at node boot, and applications where initial knowledge of cpu identification is needed to guide framework component selection.
Add orte configuration option to control the use of the framework in the system. Although the code will build, it will not be active unless configured with --enable-bootstrap.

If bootstrap is enabled and the new opal_sysinfo framework can successfully determine the cpu model, pass that info to the application as an MCA param to support some work at Sun.

Also, have daemons report back the resources they find to guide process mapping in bootstrap operations (i.e., where the daemon starts at node boot as opposed to being launched at application start).

Adjust some platform files to enable these capabilities.

This commit was SVN r22244.
2009-11-30 23:11:25 +00:00
Ralph Castain
e38a0eab9f Remove the fddp and sensor frameworks - relocated to new cluster mgr project
This commit was SVN r22240.
2009-11-27 22:14:47 +00:00
Ralph Castain
c749fefbd0 Instead of an odls-base mca param, make report_bindings a global param so that we can (a) detect it was set in the plm, and then (b) ensure it gets passed along to remote orteds so they will comply with the request.
This commit was SVN r22021.
2009-09-28 03:17:15 +00:00
Ralph Castain
2210989e2d Update the cm ess module to support orted bootstrap. Continue work towards bootstrap capability.
This commit was SVN r21989.
2009-09-22 02:16:40 +00:00
Ralph Castain
8ae4b55d16 Enable a new command line option to --report-events that instructs mpirun to RML-report specific events during job life to the requestor.
This commit was SVN r21954.
2009-09-09 05:28:45 +00:00
Ralph Castain
0421a49844 Update the xml support to allow -xml-file foo whereby we redirect all xml formatted output (and ONLY xml formatted output) to a specified file
This commit was SVN r21930.
2009-09-02 18:03:10 +00:00
Ralph Castain
509cc0553c When directly launched by an RM, flag that a process is operating without daemons - i.e., standalone. Provide an error string for the new socket_not_available error. Use errmgr.abort to exit when we cannot get a socket, and ensure that the slurmd module returns the proper exit status for slurm 2.0
This commit was SVN r21868.
2009-08-22 02:58:20 +00:00
Ralph Castain
7183179f56 Provide native integration with SLURM 2.0's OMPI support
This commit was SVN r21865.
2009-08-21 18:03:34 +00:00
Ralph Castain
c3c642aa0d Add two new frameworks for sensing and predicting faults. This is just the bare-bones plumbing for now - will instantiate soon.
No ess modules reference these frameworks yet, so they are completely inactive.

This commit was SVN r21847.
2009-08-20 04:27:16 +00:00
Ralph Castain
0005e6e834 Correct a couple of bugs in the rank_file mapper that were incorrectly assigning vpids.
Add a capability to parse the rankfile to extract node information in place of requiring both hostfile and rankfile for non-RM managed environments. The rankfile is -only- parsed for this IF the hostfile and -host options are not given. Otherwise, those are used to establish allocation info as we did before this commit.

This commit was SVN r21815.
2009-08-13 16:08:43 +00:00
Ralph Castain
1dc12046f1 Modify the OMPI paffinity and mapping system to support socket-level mapping and binding. Mostly refactors existing code, with modifications to the odls_default module to support the new capabilities.
Adds several new mpirun options:

* -bysocket - assign ranks on a node by socket. Effectively load balances the procs assigned to a node across the available sockets. Note that ranks can still be bound to a specific core within the socket, or to the entire socket - the mapping is independent of the binding.

* -bind-to-socket - bind each rank to all the cores on the socket to which they are assigned.

* -bind-to-core - currently the default behavior (maintained from prior default)

* -npersocket N - launch N procs for every socket on a node. Note that this implies we know how many sockets are on a node. Mpirun will determine its local values. These can be overridden by provided values, either via MCA param or in a hostfile

Similar features/options are provided at the board level for multi-board nodes.

Documentation to follow...

This commit was SVN r21791.
2009-08-11 02:51:27 +00:00
Ralph Castain
e75d9b8296 Use orte_notifier to alert sys admins to checksum violations in the csum pml.
Add ability to store the RM's jobid string to tag the notifier message so that the sys admin knows what job had the problem.

This commit was SVN r21687.
2009-07-15 19:43:26 +00:00
Ralph Castain
90a2db25e9 Modify the errmgr callback function so it passes the proc that failed instead of only the jobid.
Update the cm routed module to detect and pass orted failures.

This commit was SVN r21682.
2009-07-15 11:43:33 +00:00
Josh Hursey
dcedc99a6a It seems that we do no really want to set this particular variable to NULL. (causes badness in ess)
This commit was SVN r21673.
2009-07-14 19:01:43 +00:00
Josh Hursey
b03923cd72 Make sure to set these values to NULL, so that if we release an object (knowingly or not) twice then we do not fault by referencing unallocated memory.
This commit was SVN r21672.
2009-07-14 18:56:49 +00:00
Ralph Castain
dbac602be5 Add support for the add-host and add-hostfile MPI Info keys to allow Comm_spawn users to add new hosts to those already known by mpirun.
Requires full testing once comm_spawn is fixed (Edgar is working that now).

This commit was SVN r21664.
2009-07-14 14:34:11 +00:00
Ralph Castain
60edbc7220 Fix hetero operations and comm_spawn (to a point).
Remove all architecture references from ORTE and put them back in the modex using modex_send/recv calls.

Hetero operations are now fully supported again. Comm_spawn now works up to the point where it segfaults due to an error in the CID code - which now allows Edgar to dig further! :-)

This commit was SVN r21655.
2009-07-13 20:03:41 +00:00
Ralph Castain
0ba845fed2 Continue development of regular expression support by implementing it for slurm launches. Works for both initial (cmd line and non-cmd line) and comm_spawn launch.
Additional work required to fully enable static port support when using cmd line regular expression launch system.

This commit was SVN r21502.
2009-06-23 20:25:38 +00:00
Ralph Castain
771ce035a5 Complete implementation of regular expression generator and parser - now handles leading zero's and suffix in node names.
This commit was SVN r21468.
2009-06-18 04:36:00 +00:00
Ralph Castain
8db7a9f9a7 Add regular expression generator to encode complete nid/pid maps - decoder to come.
This commit was SVN r21455.
2009-06-17 02:54:20 +00:00
Ralph Castain
44bb265a52 Add a new MPI_Info key to preposition OMPI libraries - implementation underway, but this just defines and passes the new key
This commit was SVN r21425.
2009-06-12 17:53:13 +00:00
Ralph Castain
0336460b0a Continue implementation of resilient operations by supporting reuse of jobids for restarted procs. Ensure that restarted processes have valid node and local ranks, and that node rank values are passed to direct-launched processes.
This commit was SVN r21385.
2009-06-06 01:08:47 +00:00
Ralph Castain
30a357bd8d Provide a "progress meter" for launch that outputs progress as we are launching, especially on large jobs. Also, provide a timeout mechanism so that we cleanly abort if we don't get a response from the next daemon in a specified time.
This commit was SVN r21359.
2009-06-02 23:52:02 +00:00
Ralph Castain
4e0223a638 Add the ability to directly launch procs via rsh/ssh. Collect common functions in plm/base. Create a new global param to set assume_same_shell, alias'd back to plm_rsh_assume_same_shell (not deprecated).
This commit was SVN r21328.
2009-05-30 01:10:25 +00:00
Ralph Castain
f139cfd28a Fully enable the use of static ports to minimize connections on mpirun. When static ports are provided, daemons will automatically use routes defined by the selected routed module to callback to mpirun during startup, thus elimating the dedicated daemon-to-mpirun connection. Therefore, the total number of connections on mpirun will equal the fanout of the routed module (instead of #nodes in job).
Add a new tm ess module that exploits this capability.

Update the various plm modules to enable it - just a minor change reflecting an added param to a plm base function.

Additional fixes included:

1. remove an erroneous cleanup of session directories in the tool finalize procedure - tools don't create session directories to begin with!

2. fix a duplicate free when attempting to execute a non-existent app

3. cleanup an typo in the comm utilities 

4. fix comm_spawn - was perturbed by the changes in pack/unpack of orte_job_t to properly support orte-ps

Been tested on slurm and tm machines, using all tests in orte/test/mpi. May run into issue with command line length on large jobs due to inclusion of node info to support static ports - will fix this next with addition of regexp generator to compress that info.

This commit was SVN r21248.
2009-05-16 04:15:55 +00:00
Ralph Castain
c6f0499720 Some cleanups required from last night's commits to resolve some race conditions and ensure we cleanup properly. Also, remove some debug output that was unintentionally left "on" by default.
This commit was SVN r21202.
2009-05-11 14:03:07 +00:00
Ralph Castain
10a694ea43 The current errmgr.register_callback API takes a jobid as one of its argument. The intent was to have the errmgr check the jobid of the job being reported to it and, if it matches the jobid that was registered, call the specified callback function.
Unfortunately, we assign the jobid during the plm.spawn procedure - which means it happens -after- control of the job has passed out of the range of mpirun (or whatever program is spawning the job), so it is too late for that main program to register a callback function. If the main program registers tha callback -after- we return from plm.spawn, then it (a) cannot get a callback for failed-to-start, and (b) will miss the callback if a proc aborts in the time between job launch and the call to errmgr.register_callback.

This commit fixes the problem by adding callback-related fields to the orte_job_t object. Thus, the main program can specify what job states should initiate a callback, what function is to be called, and what data is to be passed back by simply filling in the orte_job_t fields prior to calling plm.spawn.

Also, fully implement the "copy" function for the orte_job_t object.

NOTE: as a result of this change, the errmgr.register_callback API may no longer be of any value.

This commit was SVN r21200.
2009-05-11 03:38:15 +00:00
Ralph Castain
4be24521aa Modify the orte_process_info structure to handle a broader range of process types by replacing the individual booleans with a 32-bit bitmap. Use a set of #define's to define the individual bits, and a set of matching macros to test for them. Update the orte code base to use the macros instead of the booleans.
Minor mod to the ompi layer to use the new #define's - just one-line name replacements.

This commit was SVN r21144.
2009-05-04 11:07:40 +00:00
Ralph Castain
5fa3b38d3c Revert r21097 as this results in multiple instantiations of global variables. Instead, fix the problem by including orte_globals.h in the orte_init.c.
Since I already had some changes in there, add in the rmaps rank_file changes - should work okay, but not fully tested.

This commit was SVN r21099.

The following SVN revision numbers were found above:
  r21097 --> open-mpi/ompi@88ae934c26
2009-04-29 02:13:14 +00:00
Rainer Keller
221fb9dbca ... Delayed due to notifier commits earlier this day ...
- Delete unnecessary header files using
   contrib/check_unnecessary_headers.sh after applying
   patches, that include headers, being "lost" due to
   inclusion in one of the now deleted headers...

   In total 817 files are touched.
   In ompi/mpi/c/ header files are moved up into the actual c-file,
   where necessary (these are the only additional #include),
   otherwise it is only deletions of #include (apart from the above
   additions required due to notifier...)

 - To get different MCAs (OpenIB, TM, ALPS), an earlier version was
   successfully compiled (yesterday) on:
   Linux locally using intel-11, gcc-4.3.2 and gcc-SVN + warnings enabled
   Smoky cluster (x86-64 running Linux) using PGI-8.0.2 + warnings enabled
   Lens cluster (x86-64 running Linux) using Pathscale-3.2 + warnings enabled

This commit was SVN r21096.
2009-04-29 01:32:14 +00:00
Ralph Castain
9f7c605166 More cleanup of pointer array usage
This commit was SVN r20981.
2009-04-13 19:06:54 +00:00
Ralph Castain
d0b50a2b9b Eliminate an annoying "not found" message when a job abnormally terminates. In this case, we can get a race condition where the job object has been removed, but updates are continuing to flow into the system.
This commit was SVN r20857.
2009-03-24 18:06:49 +00:00
Rainer Keller
ec0ed48718 - Revert r20739
This commit was SVN r20742.

The following SVN revision numbers were found above:
  r20739 --> open-mpi/ompi@781caee0b6
2009-03-05 21:56:03 +00:00
Rainer Keller
781caee0b6 - First of two or three patches, in orte/util/proc_info.h:
Adapt orte_process_info to orte_proc_info, and
   change orte_proc_info() to orte_proc_info_init().
 - Compiled on linux-x86-64
 - Discussed with Ralph

This commit was SVN r20739.
2009-03-05 20:36:44 +00:00
Ralph Castain
f11931306a Modify the accounting system to recycle jobids. Properly recover resources from nodes and jobs upon completion. Adjustments in several places were required to deal with sparsely populated job, node, and proc arrays as a result of this change.
Correct an error wrt how jobids were being computed. Needed to ensure that the job family field was not overrun as we increment jobids for comm_spawn.

Update the slurm plm module so it uses the new slurm termination procedure (brings trunk back into alignment with 1.3 branch).

Update the slurmd ess component so it doesn't get selected if we are running a singleton inside of a slurm allocation.

Cleanup HNP init by moving some code that had been in orte_globals.c for historical reasons into the ess hnp module, and removing the call to that code from the ess_base_std_prolog


NOTE: this change allows orte to support an infinite aggregate number of comm_spawn's, with up to 64k being alive at any one instant. HOWEVER, the MPI layer currently does -not- support re-use of jobids. I did some prototype coding to revise the ompi_proc_t structures, but the BTLs are caching their own data, and there was no readily apparent way to update it. Thus, attempts to spawn more than the 64k limit will abort to avoid causing the MPI layer to hang.

This commit was SVN r20700.
2009-03-03 16:39:13 +00:00
Ralph Castain
b8ffa302da Separate abnormal job termination from abnormal orted termination so we can continue to use xcast for orted cmds, but can know to turn off reading of stdin as the job is being terminated.
This commit was SVN r20650.
2009-02-27 10:16:25 +00:00
Ralph Castain
dcff523244 Fix a race condition that causes corruption of a buffer in mpirun while trying to process launch_local_proc cmds.
Cleanup the pidmap handling by changing from value to pointer arrays.

This commit was SVN r20629.
2009-02-25 02:43:22 +00:00
George Bosilca
4004cb11bc Release the orte_default_hostfile.
This commit was SVN r20561.
2009-02-14 21:49:56 +00:00
Rainer Keller
d81443cc5a - On the way to get the BTLs split out and lessen dependency on orte:
Often, orte/util/show_help.h is included, although no functionality
   is required -- instead, most often opal_output.h, or               
   orte/mca/rml/rml_types.h                                           
   Please see orte_show_help_replacement.sh commited next.            

 - Local compilation (Linux/x86_64) w/ -Wimplicit-function-declaration
   actually showed two *missing* #include "orte/util/show_help.h"     
   in orte/mca/odls/base/odls_base_default_fns.c and                  
   in orte/tools/orte-top/orte-top.c                                  
   Manually added these.                                              

   Let's have MTT the last word.

This commit was SVN r20557.
2009-02-14 02:26:12 +00:00
Jeff Squyres
91d302fd67 A bunch of minor ORTE valgrind-inspired memory leak cleanups (reviewed
by Ralph).

This commit was SVN r20544.
2009-02-13 04:14:10 +00:00
Ralph Castain
62dd763a8f Add ability for local slave spawns to pre-position supporting files. Update comm_spawn and comm_spawn_multiple man pages to cover new info_keys.
This commit was SVN r20527.
2009-02-12 15:56:45 +00:00
Ralph Castain
f0af389910 Enable comm_spawn of slave processes, currently only active for the rsh, slurm, and tm environments. Establish support for local rsh environments in the plm/base so that rsh of local slaves can be done by any environment that supports it. Create new orte_rsh_agent param so users can specify rsh agent from outside of rsh plm, and sym link that to the old plm_rsh_agent and pls_rsh_agent options.
Modify the orte-bootproxy to pass prefix for the remote slave to support hetero/hybrid scenarios

This commit was SVN r20492.
2009-02-09 20:44:44 +00:00
Ralph Castain
f8cd188367 Make the orte_pmap_t an object so it can be properly initialized. Adjust the construct function to properly indicate invalid node/local ranks
This commit was SVN r20465.
2009-02-06 15:29:33 +00:00
Ralph Castain
2966206f58 Fix a race condition in the IOF and add some new user-requested features:
1. fix a race condition whereby a proc's output could trigger an event prior to the other outputs being setup, thus c ausing the IOF to declare the proc "terminated" too early. This was really rare, but could happen.

2. add a new "timestamp-output" option that timestamp's each line of output

3. add a new "output-filename" option that redirects each proc's output to a separate rank-named file.

4. add a new "xterm" option that redirects the output of the specified ranks to a separate xterm window.

This commit was SVN r20392.
2009-01-30 22:47:30 +00:00
Rolf vandeVaart
0704b98668 Add the ability to forward SIGTSTP (converted to SIGSTOP) and
SIGCONT to the a.outs.  By default, they are not forwarded and
the behavior remains as it has always been.  However, if one
runs with --mca orte_forward_job_control 1, then mpirun will
catch those two signals and forward them to the orteds which
will deliver them to the a.outs.  We have had requests for
this feature.

This commit was SVN r20391.
2009-01-30 18:50:10 +00:00
Ralph Castain
0435108834 Improve the efficiency of the launch system by changing the outer loop to being over app_context, and adding a flag to the app_context so the daemon can record that "this app is on my node" when decoding the launch msg.
If the --wdir option is given, check to see if the user provided a relative path. If so, convert it to an absolute path. This is needed to maintain consistent behavior across environements. Some environments automatically chdir to your current working directory when launching the remote orted, while others (e.g., ssh) don't. This levels the playing field and reduces user surprise.

This commit was SVN r20342.
2009-01-25 12:39:24 +00:00
Ralph Castain
88a0af9726 Revise the way we output resolved hostnames to make life easier for the Eclipse folks. Store aliases for individual nodes (only when requested to show resolved hostnames) and then report them out as part of the display-map option.
This commit was SVN r20284.
2009-01-15 18:11:50 +00:00
Ralph Castain
2778c13fac Continue to refine the timing instrumentation to identify where launch time is being spent
This commit was SVN r20244.
2009-01-12 19:12:58 +00:00
Jeff Squyres
d1c6f3f89a * Fix a truckload of Cisco copyrights to be the same as the rest of
the code base.
 * Fix a few misspellings in other copyrights.

This commit was SVN r20241.
2009-01-11 02:30:00 +00:00
Ralph Castain
007d68becc Make the data on local children and their jobs available globally on both daemons and the HNP. This simply shifts the data structures from the ODLS base to the orte globals area to support subsequent movement of the daemon collective operations from the odls to the grpcomm framework. As that will be a larger change, it will be implemented on a branch and rolled over separately.
This commit was SVN r20228.
2009-01-08 14:25:56 +00:00