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Jeff Squyres
253444c6d0 == Highlights ==
1. New mpifort wrapper compiler: you can utilize mpif.h, use mpi, and use mpi_f08 through this one wrapper compiler
 1. mpif77 and mpif90 still exist, but are sym links to mpifort and may be removed in a future release
 1. The mpi module has been re-implemented and is significantly "mo' bettah"
 1. The mpi_f08 module offers many, many improvements over mpif.h and the mpi module

This stuff is coming from a VERY long-lived mercurial branch (3 years!); it'll almost certainly take a few SVN commits and a bunch of testing before I get it correctly committed to the SVN trunk.

== More details ==

Craig Rasmussen and I have been working with the MPI-3 Fortran WG and Fortran J3 committees for a long, long time to make a prototype MPI-3 Fortran bindings implementation.  We think we're at a stable enough state to bring this stuff back to the trunk, with the goal of including it in OMPI v1.7.  

Special thanks go out to everyone who has been incredibly patient and helpful to us in this journey:

 * Rolf Rabenseifner/HLRS (mastermind/genius behind the entire MPI-3 Fortran effort)
 * The Fortran J3 committee
 * Tobias Burnus/gfortran
 * Tony !Goetz/Absoft
 * Terry !Donte/Oracle
 * ...and probably others whom I'm forgetting :-(

There's still opportunities for optimization in the mpi_f08 implementation, but by and large, it is as far along as it can be until Fortran compilers start implementing the new F08 dimension(..) syntax.

Note that gfortran is currently unsupported for the mpi_f08 module and the new mpi module.  gfortran users will a) fall back to the same mpi module implementation that is in OMPI v1.5.x, and b) not get the new mpi_f08 module.  The gfortran maintainers are actively working hard to add the necessary features to support both the new mpi_f08 module and the new mpi module implementations.  This will take some time.

As mentioned above, ompi/mpi/f77 and ompi/mpi/f90 no longer exist.  All the fortran bindings implementations have been collated under ompi/mpi/fortran; each implementation has its own subdirectory:

{{{
ompi/mpi/fortran/
  base/               - glue code
  mpif-h/             - what used to be ompi/mpi/f77
  use-mpi-tkr/        - what used to be ompi/mpi/f90
  use-mpi-ignore-tkr/ - new mpi module implementation
  use-mpi-f08/        - new mpi_f08 module implementation
}}}

There's also a prototype 6-function-MPI implementation under use-mpi-f08-desc that emulates the new F08 dimension(..) syntax that isn't fully available in Fortran compilers yet.  We did that to prove it to ourselves that it could be done once the compilers fully support it.  This directory/implementation will likely eventually replace the use-mpi-f08 version.

Other things that were done:

 * ompi_info grew a few new output fields to describe what level of Fortran support is included
 * Existing Fortran examples in examples/ were renamed; new mpi_f08 examples were added
 * The old Fortran MPI libraries were renamed:
   * libmpi_f77 -> libmpi_mpifh
   * libmpi_f90 -> libmpi_usempi
 * The configury for Fortran was consolidated and significantly slimmed down.  Note that the F77 env variable is now IGNORED for configure; you should only use FC. Example:
{{{
shell$ ./configure CC=icc CXX=icpc FC=ifort ...
}}}

All of this work was done in a Mercurial branch off the SVN trunk, and hosted at Bitbucket.  This branch has got to be one of OMPI's longest-running branches.  Its first commit was Tue Apr 07 23:01:46 2009 -0400 -- it's over 3 years old!  :-)  We think we've pulled in all relevant changes from the OMPI trunk (e.g., Fortran implementations of the new MPI-3 MPROBE stuff for mpif.h, use mpi, and use mpi_f08, and the recent Fujitsu Fortran patches).

I anticipate some instability when we bring this stuff into the trunk, simply because it touches a LOT of code in the MPI layer in the OMPI code base.  We'll try our best to make it as pain-free as possible, but please bear with us when it is committed.

This commit was SVN r26283.
2012-04-18 15:57:29 +00:00
Greg Koenig
60485ff95f This is a very large change to rename several #define values from
OMPI_* to OPAL_*.  This allows opal layer to be used more independent
from the whole of ompi.

NOTE: 9 "svn mv" operations immediately follow this commit.

This commit was SVN r21180.
2009-05-06 20:11:28 +00:00
Rainer Keller
221fb9dbca ... Delayed due to notifier commits earlier this day ...
- Delete unnecessary header files using
   contrib/check_unnecessary_headers.sh after applying
   patches, that include headers, being "lost" due to
   inclusion in one of the now deleted headers...

   In total 817 files are touched.
   In ompi/mpi/c/ header files are moved up into the actual c-file,
   where necessary (these are the only additional #include),
   otherwise it is only deletions of #include (apart from the above
   additions required due to notifier...)

 - To get different MCAs (OpenIB, TM, ALPS), an earlier version was
   successfully compiled (yesterday) on:
   Linux locally using intel-11, gcc-4.3.2 and gcc-SVN + warnings enabled
   Smoky cluster (x86-64 running Linux) using PGI-8.0.2 + warnings enabled
   Lens cluster (x86-64 running Linux) using Pathscale-3.2 + warnings enabled

This commit was SVN r21096.
2009-04-29 01:32:14 +00:00
Josh Hursey
99144db970 Improve checkpoint/restart support by allowing a checkpoint to progress when the process is *not* in the MPI library. This involves creating a separate thread for polling for a checkpoint request. This thread is active when the MPI process is not in the MPI library, and paused when the MPI process is in the library.
Some MPI C interface files saw some spacing changes to conform to the coding standards of Open MPI.

Changed MPI C interface files to use {{{OPAL_CR_ENTER_LIBRARY()}}} and {{{OPAL_CR_EXIT_LIBRARY()}}} instead of just {{{OPAL_CR_TEST_CHECKPOINT_READY()}}}. This will allow the checkpoint/restart system more flexibility in how it is to behave.

Fixed the configure check for {{{--enable-ft-thread}}} so it has a know dependance on {{{--enable-mpi-thread}}} (and/or {{{--enable-progress-thread}}}).

Added a line for Checkpoint/Restart support to {{{ompi_info}}}.

Added some options to choose at runtime whether or not to use the checkpoint polling thread. By default, if the user asked for it to be compiled in, then it is used. But some users will want the ability to toggle its use at runtime.

There are still some places for improvement, but the feature works correctly. As always with Checkpoint/Restart, it is compiled out unless explicitly asked for at configure time. Further, if it was configured in, then it is not used unless explicitly asked for by the user at runtime.

This commit was SVN r17516.
2008-02-19 22:15:52 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00
Brian Barrett
657168a74c A couple of Window related error handling cleanups:
* Always invoke the error handler on MPI_COMM_WORLD for
    invalid windows (except in win_create, which should 
    instead be on the given communicator).
  * Allow get_errhandler in addition to set_errhandler
    on MPI_WIN_NULL

Refs trac:647

This commit was SVN r12718.

The following Trac tickets were found above:
  Ticket 647 --> https://svn.open-mpi.org/trac/ompi/ticket/647
2006-12-01 20:05:06 +00:00
Jeff Squyres
299f4fdb2c Oops -- fix the comment. A victim of cut-n-paste.
This commit was SVN r9971.
2006-05-18 18:10:12 +00:00
Jeff Squyres
942f9e8f8d Fixes for ticket:14. Lengthy discussion is on that ticket and in a
comment in ompi_comm_invalid() in
source:/trunk/ompi/communicator/communicator.h.

Short version:
- ompi_comm_invalid() returns TRUE for MPI_COMM_NULL
- therefore MPI_COMM_C2F needs to explicitly check for MPI_COMM_NULL
  (because it uses ompi_comm_invalid())
- make ~20 MPI functions only call ompi_comm_invalid() instead of
  calling ompi_comm_invalid() *and* checking for MPI_COMM_NULL (~40 MPI
  functions already only called ompi_comm_invalid() -- we should be
  consistent)
- similar issue for ompi_win_invalid(), so I added a cross-referencing
  comment in win.h and fixed MPI_WIN_SET_NAME to only call
  ompi_win_invalid() (and not check for MPI_WIN_NULL)

This commit was SVN r9970.
2006-05-18 18:05:46 +00:00
Jeff Squyres
f710ef5b2b Commit 1.5 of 2: just like r9560, we need to make the MPI_*_C2F
functions return an invalid fortran handle (-1) if an invalid C handle
is passed in.

Just so it's logged somewhere -- it looks like commit 2 of 2 as noted
in the r9560 commit message (ok, 3 of 3 if you're really counting),
where we have to edit the C interface functions to check for NULL, is
going to be far easier than I thought -- many (but not all) of the C
interface functions already check for NULL MPI handles (either
directly or through helper functions).  

Woo hoo for foresight...

This commit was SVN r9561.

The following SVN revision numbers were found above:
  r9560 --> open-mpi/ompi@e00c6053dc
2006-04-07 04:01:22 +00:00
Brian Barrett
566a050c23 Next step in the project split, mainly source code re-arranging
- move files out of toplevel include/ and etc/, moving it into the
    sub-projects
  - rather than including config headers with <project>/include, 
    have them as <project>
  - require all headers to be included with a project prefix, with
    the exception of the config headers ({opal,orte,ompi}_config.h
    mpi.h, and mpif.h)

This commit was SVN r8985.
2006-02-12 01:33:29 +00:00
Brian Barrett
44a516d966 * Clean up error checking in the MPI interface for MPI-2 onesided
* Implement fortran handle -> c handle tracking
* Remove some unneeded locking around free lists (the free list
  macros do their own locking)
* Try to be a bit more memory friendly with the w_mode setting /
  checking

This commit was SVN r8865.
2006-01-31 21:40:12 +00:00
Jeff Squyres
42ec26e640 Update the copyright notices for IU and UTK.
This commit was SVN r7999.
2005-11-05 19:57:48 +00:00
George Bosilca
71b1cdb5f5 Cleanup the dependencies between the MPI layer and the rest of the ompi files.
Modify the includes to start with the root directory (i.e orte/datatype/datatype.h).

This commit was SVN r7306.
2005-09-12 09:17:44 +00:00
Jeff Squyres
4ab17f019b Rename src -> ompi
This commit was SVN r6269.
2005-07-02 13:43:57 +00:00