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30358 Коммитов

Автор SHA1 Сообщение Дата
Gilles Gouaillardet
fda4d040da fortran/use-mpi-f08: misc fixes
- fix typos from open-mpi/ompi@b10a60a5a9
 - remove remaining references to OMPI_PROTECTED from open-mpi/ompi@df6d763a53

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-10-29 15:00:51 +09:00
Jeff Squyres
8343a289f2
Merge pull request #7112 from wbailey2/pr/fix-HACKING
Changed the final URL to https://github.com/westes/flex
2019-10-28 09:25:21 -04:00
Jeff Squyres
e59e6f714c
Merge pull request #7105 from ggouaillardet/topic/f08_bind_c_constants_revamp
fortran/use-mpi-f08: revamp mpi_f08 constants
2019-10-28 09:14:23 -04:00
Joseph Schuchart
02dd877d8a RDMA osc: perform CAS in shared memory if possible
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-10-28 11:24:16 +01:00
William Bailey
caf1d9292c Changed the final URL to https://github.com/westes/flex
Signed-off-by: William Bailey <wbailey2@nd.edu>
2019-10-27 22:33:50 -04:00
Gilles Gouaillardet
51e23f8cb6 fortran/use-mpi-f08: remove bind(C) constants.
Remove unused bind(C) constants in ompi/mpi/fortran/use-mpi-f08/constants.{c,h}
(and break ABI compatibility).

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-10-28 10:28:17 +09:00
Gilles Gouaillardet
df6d763a53 configury: remove references to unused OMPI_PROTECTED
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-10-28 10:28:17 +09:00
Gilles Gouaillardet
b10a60a5a9 fortran/use-mpi-f08: revamp constant declarations
In order to work around an issue with flang based compilers,
avoid declaring bind(C) constants and use plain Fortran parameter
instead.

For example,
type(MPI_Comm), bind(C, name="ompi_f08_mpi_comm_world") OMPI_PROTECTED :: MPI_COMM_WORLD
is changed to
type(MPI_Comm), parameter :: MPI_COMM_WORLD = MPI_Comm(OMPI_MPI_COMM_WORLD)

Note that in order to preserve ABI compatibility, ompi/mpi/fortran/use-mpi-f08/constants.{c,h}
have been kept even if its symbols are no more referenced by Open MPI.

Refs. open-mpi/ompi#7091

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-10-28 10:01:17 +09:00
Joseph Schuchart
c09ca039b4 uGNI: Fix potential deadlock when processing outstanding transfers
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-10-26 12:21:17 +02:00
Austen Lauria
aa8be9c12d
Merge pull request #6284 from devreal/ompi-rdma-memalign
Ensure proper alignment of memory provided by MPI
2019-10-25 12:27:58 -04:00
Austen Lauria
ecd990a67c
Merge pull request #6933 from devreal/osc-ucx-excl-lock
UCX osc: properly release exclusive lock to avoid lockup
2019-10-25 09:16:51 -04:00
Austen Lauria
96f55b0b32
Merge pull request #7096 from jsquyres/pr/fix-alps-configure-output
opal_check_alps: fix configure output
2019-10-25 09:02:25 -04:00
Jeff Squyres
d8f17aea69
Merge pull request #7097 from mcoil1/pr/README-fix2
README: Use "--" notation for CLI options
2019-10-18 16:32:29 -04:00
Maxwell Coil
7e07346524 README: Use "--" notation for CLI options
Signed-off-by: Maxwell Coil <mcoil@nd.edu>
2019-10-18 15:44:23 -04:00
Jeff Squyres
26705efad0 opal_check_alps: fix configure output
There was a path where OPAL_CHECK_ALPS would exit its testing but
still leave `opal_check_cray_alps_happy` blank.  Fix that by setting
it to "no".

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-10-18 11:30:00 -07:00
Edgar Gabriel
dce203ffc6
Merge pull request #7057 from edgargabriel/topic/romio321-status-set-elements-fix
MPIR_Status_set_bytes: fix for large counts
2019-10-18 08:16:36 -05:00
Nathan Hjelm
b1ef5a40fa
Merge pull request #7016 from hjelmn/fix_btl_uct_from_yet_another_unannounced_api_break_in_the_openucx_uct_layer
btl/uct: add support for OpenUCX v1.8 API changes
2019-10-17 06:27:18 -07:00
Scott Miller
c1b8599528 plm/rsh: Add chdir option to change directory before orted exec
Signed-off-by: Scott Miller <scott.miller1@ibm.com>
2019-10-15 17:19:30 -04:00
Jeff Squyres
b6c4d5c118
Merge pull request #7060 from jsquyres/pr/usnic-mca-updates
BTL usnic MCA updates
2019-10-15 10:48:10 -04:00
Jeff Squyres
e1e6d8b85e
Merge pull request #7076 from ftab/pr/my-superlative-fix
README: Remove info for plugins that aren't used anymore
2019-10-10 14:52:36 -04:00
Jeff Squyres
65fd12feff
Merge pull request #7081 from msbrowning/pr/fixed-README
Removed text block from line 883 of README.
2019-10-10 14:52:23 -04:00
Mark Browning
77b3ff9d38 Remove the stale cr MPI extension
Also removed text block from line 883 of README.

Signed-off-by: Mark Browning <marksbrowning3@gmail.com>
2019-10-10 13:24:30 -04:00
Jeff Squyres
f7ee4463b3
Merge pull request #7079 from CalebProvost/hacktoberfest
Edit README
2019-10-10 13:18:54 -04:00
Jeff Squyres
896ce76b64
Merge pull request #7082 from kizill/master
Fix ipv6 improper address copy bug
2019-10-10 12:01:44 -04:00
Jeff Squyres
8f3583d3bd
Merge pull request #7073 from Joe-Downs/pr/fix-README
README: edit "dist_graph topologies" to "communicator topologies"
2019-10-10 11:55:43 -04:00
Jeff Squyres
d736253079
Merge pull request #7074 from classicsman/pr/fix-README
Deleted paragraph
2019-10-10 11:50:38 -04:00
Jeff Squyres
836a0766ae
Merge pull request #7072 from bfitzgit23/pr/fix-README
README-fixed-bfitzgit23
2019-10-10 11:39:06 -04:00
CalebProvost
634054fb37 README: minor grammar fixes
Signed-off-by: CalebProvost <DHX664@gmail.com>
2019-10-10 11:23:55 -04:00
Rick Gleitz
0c923c5428 README: deleted stale paragraph about fca component
Signed-off-by: Rick Gleitz <rgleitz@jefflibrary.org>
2019-10-10 11:07:53 -04:00
Jeff Squyres
f77c3327d8
Merge pull request #7070 from Cfoster01/pr/fix-README
updated readme to remove double space on line 297
2019-10-10 11:06:52 -04:00
Jeff Squyres
69eca3c599
Merge pull request #7069 from summonholmes/master
Fix a typo: slopen -> dlopen
2019-10-10 11:06:12 -04:00
Jeff Squyres
f10e582f71
Merge pull request #7078 from santa65/pr/readme-fix
fix address
2019-10-10 10:32:27 -04:00
bfitzgit23
38da109217 README: Removed stale sentance about --enable-mpi-thread-multiple
Signed-off-by: bfitzgit23 <dfitz@me.com>
2019-10-10 10:22:09 -04:00
shanekimble
72b6292b69 Fix a typo: slopen -> dlopen
Signed-off-by: shanekimble <skimble@edjanalytics.com>
2019-10-10 10:04:09 -04:00
santa magar
3bbf870fde README: fix Knem URL
Signed-off-by: santa magar <santa65thapa@yahoo.com>
2019-10-10 09:34:33 -04:00
Stanislav Kirillov
0e0763e006
fix ipv6 btl connection bug
Signed-off-by: Stanislav Kirillov <staskirillof@yandex.ru>
2019-10-10 11:20:37 +00:00
Dennis Field
e72b93bf60 README: Remove info for plugins that aren't used anymore
Signed-off-by: Dennis Field <fury@xibase.com>
2019-10-09 20:38:50 -04:00
Joe Downs
dd6a4f3950 README: edit to "communicator topologies"
Signed-off-by: Joe Downs <joedowns502@gmail.com>
2019-10-09 20:22:26 -04:00
Foster
252e98c474 updated readme to remove double space on line 297
Signed-off-by: Foster <CCF6703@yum.com>
2019-10-09 20:17:46 -04:00
Todd Kordenbrock
f7e74b6a3d btl-portals4: fix a flow control configure bug
This commit fixes a configure bug that caused flow control to be
disabled regardless of the configure options used.

Signed-off-by: Todd Kordenbrock <thkgcode@gmail.com>
2019-10-09 17:12:56 -05:00
Todd Kordenbrock
e7b867c044 mtl-portals4: don't finalize flow control if Portals4 was not initialized
This commit fixes a segfault in mtl-portals4 finalize().  The segfault
occurs if finalize() is called without any calls to add_procs().  This
commit resolves the segfault by skipping the flow control fini() call if
Portals4 was not initialized.

Signed-off-by: Todd Kordenbrock <thkgcode@gmail.com>
2019-10-09 17:07:50 -05:00
Geoff Paulsen
4e1e6f8972
Merge pull request #6993 from awlauria/fix_warnings_master
Fix miscellaneous compiler warnings.
2019-10-09 09:17:02 -05:00
Gilles Gouaillardet
096da7b3b5
Merge pull request #7061 from ggouaillardet/topic/ucx_zero_size_ddt
pml/ucx: correctly handle zero size datatypes
2019-10-09 17:28:18 +09:00
Gilles Gouaillardet
33361aa124 pml/ucx: correctly handle zero size datatypes
zero-size derived datatypes are now flagged as OPAL_DATATYPE_FLAG_CONTIGUOUS
so update mca_pml_ucx_init_datatype() to correctly handle them.
Since 'size' is a 'size_t', the assertion can simply be removed.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-10-09 16:54:00 +09:00
Gilles Gouaillardet
8906f8cdc6
Merge pull request #7062 from ggouaillardet/topic/travis_distcheck
travis: fix make distcheck
2019-10-09 13:30:14 +09:00
Nathan Hjelm
196a91e604 coll/basic: fix neighbor alltoall message ordering
This commit updates the coll/basic component to correctly order sends
and receives for cartesian communicators with cyclic boundaries. This
addresses an issue identified by mpi-forum/mpi-issues#153. This issue
occurs when the size in any dimension is 1. This gives the same
neighbor in the positive and negative directions. The old code was
sending and receiving in the same order so the -1 buffer contained
the +1 result and vise-versa. The problem is addressed by using
unique tags for each send. This should cover both the case where
overtaking is allowed and is not allowed. The former case will be
possible is a MPI_Cart_create_with_info() call is added to the
standard.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2019-10-08 21:10:49 -07:00
Gilles Gouaillardet
d37f35244f travis: fix make distcheck
bad side effect occurs when CPPFLAGS is set in the environment,
so set it (and LDFLAGS too) on the configure command line.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-10-09 12:57:54 +09:00
Jeff Squyres
3080033a8c btl/usnic: set retrans_timeout back down to 5ms
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-10-08 11:17:54 -07:00
Jeff Squyres
132e4cab3b btl/usnic: set ack_iteration_delay default to 4
It was previously accidentally set to 0.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-10-08 11:17:30 -07:00
Edgar Gabriel
8a3abbf803 MPIR_Status_set_bytes: fix for large count sizes
Change the ncounts argument to MPI_Count and use
MPI_Status_set_elements_x for enabling read/write operations beyond
the 2GB limit.

Thanks to  Richard Warren from the HDF5 group for reporting the issue
and providing the suggested fix for romio.

Signed-off-by: Edgar Gabriel <egabriel@central.uh.edu>
2019-10-08 10:47:02 -05:00