After seeing the uglyness that is removing directories in the
codebase I decided to push down this to the OPAL by extending the
opal/os_create_dirpath.(c|h) to contain some more functionality.
In this process I renamed 'os_create_dirpath' to 'os_dirpath' since it
is a bit more general now.
Added a few functions to:
- check if an directory is empty
- check to see if the access permissions are set correctly
- destroy the directory at the end of the dirpath
- By using a caller callback function (a la Perl, I believe)
for every file, the caller can have fine grained control over
whether a specific file is deleted or not.
This simplifies things a bit for orte_session_dir_(finalize|cleanup)
as it should no longer contain any of this functionality, but uses
these functions to do the work.
From the external perspective nothing has changed, from the
developer point of view we have some cleaner, more generic code.
This commit was SVN r10640.
Since we don't properly handle connecting/disconecting from multiple
universes, only connect to the first one (or the user specified one).
This is a bug that needs to be fixed, but involves some deep magic in
ORTE.
Print the node segment upon request (-n option).
{{{
Node Name | Arch | Cell ID | State | Slots | Slots Max |
-----------------------------------------------------------
odin001 | | 0 | Unknown | 2 | 4 |
odin002 | | 0 | Unknown | 2 | 5 |
odin003 | | 0 | Unknown | 2 | 6 |
odin004 | | 0 | Unknown | 2 | 7 |
}}}
Since node_slots_alloc and node_slots_inuse are not properly updated
in the GPR don't print those values.
This commit was SVN r10633.
This moves the logic to create the symbolic links for:
- mpirun
- mpiexec
- ompi-ps
- ompi-clean
and their respective man pages to the ompi level from
the orte layer.
This is a bit pedantic, but orte shouldn't be doing the
work of ompi since that is a bit of an abstraction break.
Note: need to autogen.sh to get this. Sorry :(
This commit was SVN r10602.
per a request.
Currently it is not working well. That will soon change
as it just needs a bit of attention and testing to
make it lots-mo-betta.
This commit was SVN r10556.
per a request for its functionality into the main trunk.
This command provides basic information about a running job. It
needs a bit of attention, but works fine in its current iteration.
Please play with it, and lets try to work out all the left over bugs.
Pending action for this tool:
It has been requested that the tool be changed slightly to allow
it to be called via a function call from internal libraries
(e.g. orteconsole).
This commit was SVN r10554.
SIGUSR2. This can be extended later if needed to include other
signals we should forward to the user processes (TSTP and CONT,
perhaps?)
* Since the signal handlers don't actually run in signal context, we
can use malloc/fprintf/etc. So clean up some of the signal handler
code so that we don't keep message buffers around for the life of
the process
This commit was SVN r10496.
mpirun/orterun now has an option to print the version number. If -V/--version
is given, it will print the version number. If it's the only option, we
exit cleanly. Otherwise, we continue on as if --version wasn't given
(except we've printed the version number).
--This line, and th se below, will be ignored--
M orte/tools/orterun/orterun.c
M orte/tools/orterun/help-orterun.txt
This commit was SVN r10276.
1. Changed the RMGR and PLS APIs to add "signal_job" and "signal_proc" entry points. Only the "signal_job" entries are implemented - none of the components have implementations for "signal_proc" at this time. Thus, you can signal all of the procs in a job, but cannot currently signal only one specific proc.
2. Implemented those new API functions in all components except xgrid (Brian will do so very soon). Only the rsh/ssh and fork modules have been tested, however, and only under OS-X.
3. Added signal traps and callback functions for SIGUSR1/2 to orterun/mpirun that catch those signals and call the appropriate commands to propagate them out to all processes in the job.
4. Added a new test directory under the orte branch to (eventually) hold unit and system level tests for just the run-time. Since our test branch of the repository is under restricted access, people working on the RTE were continually developing their own system-level tests - thus making it hard to help diagnose problems. I have moved the more commonly-used functions here, and added one specifically for testing the SIGUSR1/2 functionality.
I will be contacting people directly to seek help with testing the changes on more environments. Other than compile issues, you should see absolutely no change in behavior on any of your systems - this additional functionality is transparent to anyone who does not issue a SIGUSR1/2 to mpirun.
Ralph
This commit was SVN r10258.
option as discussed on the devel-core mailing list. The Big
Difference is that instead of hard-coding the strings "/lib" and
"/bin" in to append to the prefix, we append the basename of the local
libdir and bindir. Hence, if your libdir is $prefix/lib64, we'll
append /lib64 to construct the remote node's LD_LIBRARY_PATH (etc.).
Also appended the orterun.1 man page to include a description of
--prefix, how it is constructed, what it handles / what it does not,
etc.
This commit was SVN r9930.
in San Jose. Allow the configure option --disable-binaries to build OMPI,
but not build or install the support binaries (so basically, just build
the libraries).
This commit was SVN r9777.
automagically bring in the libraries through the top-level library (so
liborte automatically brings in libopal, etc.). Otherwise, we get some
warnings on Solaris
This should go to the v1.1 branch
This commit was SVN r9666.
NOTE: JEFF SHOULD CHECK THIS!
I found that orterun was not tracking the index number of the app_contexts it was creating. Hence, the app_context->idx field was always sitting at zero. This index is used by the mapper to decide which app_context to use for each process - thus, with the value of each index being zero, the mapper only used the first app_context that was created. All others were ignored.
Not sure when this might have gotten changed. Could be it was a problem that always existed, but didn't get exposed until something else was changed.
Anyway, it seems to work now - could stand further testing.
This commit was SVN r9389.
(reported by Cisco)
- While in orterun, add a feature that multiple users have asked for:
if you specify an absolute pathname to orterun, such as
"/path/to/bin/orterun ...", it's equivalent to "orterun --path
/path/to ..."
This commit was SVN r9181.
- Explained <program> and made a consistancy change in the Quick Start section.
- Change references to 'app schema' to Open MPI 'app context'
- Audit the command line arguments for --foo, -foo stuff.
This commit was SVN r9097.
This needs to be gone over a few more times before it is allowed to see
daylight, but has come a long way. Some sections may be off more than a little,
but the general idea is there.
Need to audit to make sure we don't call the ORTE VHNP's daemons :)
This commit was SVN r9078.
Finished adding and pruning all the the Options.
Cleaned up a bunch of man syntax, so it should be 'more' readable (making the
assumption that man source is ever readable :p).
I am moving on to the "description" and "see also" sections next.
This commit was SVN r9077.
argv[0] and the cwd on the target node (i.e., the node where the
executable will be running in all systems except BProc, where the
searches are run on the node where orterun is invoked).
- fork pls now does cwd and argv[0] search in orted
- bproc pls does cwd and argv[0] search in orterun
- cwd behavior slightly different:
- if user specifies a -wdir to orterun, we chdir() to there; if we
can't for some reason, abort
- if user does not specify a -wdir, try to chdir() to the dir where
orterun was invoked. If we can't for some reason (e.g., it
doesn't exist on the target node), then try to chdir($HOME). If
we can't do that, then just live with whatever default directory
we were put in.
This commit was SVN r9068.
really needs to be documented (in part so that users stop asking us
how to do it!).
This is a first cut at an orterun.1 man page. It is 95% copied from
LAM's mpirun.1 lam page -- I just edited the very top and am handing
this off to Josh to finish the first cut. Then we'll add specific
docs about the behavior of some of the finer details. This is not
listed in the Makefile.am yet because it's so incomplete/incorrect
(w.r.t. OMPI), so I don't want it included in the tarball or installed
[yet].
This commit was SVN r9058.
- move files out of toplevel include/ and etc/, moving it into the
sub-projects
- rather than including config headers with <project>/include,
have them as <project>
- require all headers to be included with a project prefix, with
the exception of the config headers ({opal,orte,ompi}_config.h
mpi.h, and mpif.h)
This commit was SVN r8985.
r8698), with changes below:
- Split wrapper flags into those required for each of the three projects,
and cleaned up some cruft (including the LIBMPI_EXTRA_*FLAGS) through-
out the build system
- Added opal_init_util and opal_finalize_util to allow init / cleanup
of all the opal code that doesn't require the MCA system
- Create standalone key=value file parser, based on the one that used
to be in the mca param parser, so that it can be shared in multiple
places
- Add wrapper datafiles for opal, orte, and ompi wrappers, and add
wrapper compiler with support for all the old features
This commit was SVN r8699.
The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
r8690
r8698
(windows). Instead use the LN_S variable exported by the Makefile (set to
"ln -s" on all Unixes and to "cp -p" on windows).
When we remove an executable use the correct extension for its name
(add $(EXEEXT) to the name).
This commit was SVN r8616.
debugger scheme described in
http://www.open-mpi.org/community/lists/users/2005/10/0214.php. This
makes our user-level debugger scheme much more vendor-independent
(although the "-tv" option will still work for backwards compatibility
-- it'll just be a synonum of "--debug").
This commit was SVN r8206.
When compiling C++ code that includes something that looks for the C++
header file "memory" (stupid C++ headers not having .h extensions), it
goes through the header file search path, which includes $(topsrcdir)/opal,
so it finds the directory $(topsrcdir)/opal/memory/ and tries to load
that as the memory header file and all goes downhill.
This commit was SVN r8111.
OS X (you get an undefined symbol opal_event_lock). Since the code is
all #if 0'ed out, #if 0 out the header for now as well.
I believe console and openmpi are to be removed from OMPI before 1.0
release, so this doesn't need to go to the 1.0 branch
This commit was SVN r8089.
originally suggested by Ralf Wildenhues, to try to speed autogen, configure,
and make (and possibly even make install). Use automake's include directive
to drastically reduce the number of Makefile files (although the number of
Makefile.am files is the same - most are just included in a top-level
Makefile.am). Also use an Automake SUBDIRs feature to eliminate the
dynamic-mca tree, which was no longer really needed. This makes adding
a framework easier (since you don't have to remember the dynamic-mca
tree) and makes building faster (as make doesn't have to recurse through
the dynamic-mca tree)
This commit was SVN r7777.
command:
svn merge -r 7567:7663 https://svn.open-mpi.org/svn/ompi/tmp/jjhursey-rmaps .
(where "." is a trunk checkout)
The logs from this branch are much more descriptive than I will put
here (including a *really* long description from last night). Here's
the short version:
- fixed some broken implementations in ras and rmaps
- "orterun --host ..." now works and has clearly defined semantics
(this was the impetus for the branch and all these fixes -- LANL had
a requirement for --host to work for 1.0)
- there is still a little bit of cleanup left to do post-1.0 (we got
correct functionality for 1.0 -- we did not fix bad implementations
that still "work")
- rds/hostfile and ras/hostfile handshaking
- singleton node segment assignments in stage1
- remove the default hostfile (no need for it anymore with the
localhost ras component)
- clean up pls components to avoid duplicate ras mapping queries
- [possible] -bynode/-byslot being specific to a single app context
This commit was SVN r7664.
at the moment.
Also remove all references to --map, and (C, N) command line options in the
help file. These references will be put back in when these options are
implemented.
This commit was SVN r7574.
it is possible that if the receive has been arrived the callback will
be called before recv_buffer_nb() returns. This causes deadlock
as we try to acquire the lock, but already hold it.
This was causing orterun and orteds to stall in certian situations.
Became evident when stress testing dynamics with remote nodes.
This commit was SVN r7543.
Have the ras_base_schedule_policy MCA parameter working once again. before it
would only do slot based allocation, even if the MCA parameter was set properly.
Currently you can specify to orterun a node allocation by either:
-mca ras_base_schedule_policy node
-bynode
and slot allocation (which is the default) by:
-mca ras_base_schedule_policy slot
-byslot
This commit was SVN r7513.
caller to specify a subset of the state variables that it can can subscribe to.
This is specified with one of three special flags defined in rmgr/rmgr_types.h
This is useful when we only care about a subset of the state changes, such as
in orted which only needs to know when a job has terminated or aborted.
This commit was SVN r7356.
waiting instead for the SOH to indicate that the jobid has terminated.
In a scheduled environment, if your program has a section of MPI code
followed by a section of computation that some processes execute while
other proceses terminate normally. This patch keeps the scheduler from
terminating all of the processes and the allocation if all of the processes
on an allocated node exit well before other processes on other nodes.
This commit was SVN r7333.
AM_INIT_AUTOMAKE, instead of the deprecated version.
* Work around dumbness in modern AC_INIT that requires the version
number to be set at autoconf time (instead of at configure time, as
it was before). Set the version number, minus the subversion r number,
at autoconf time. Override the internal variables to include the r
number (if needed) at configure time. Basically, the right thing
should always happen. The only place it might not is the version
reported as part of configure --help will not have an r number.
* Since AM_INIT_AUTOMAKE taks a list of options, no need to specify
them in all the Makefile.am files.
* Addes support for subdir-objects, meaning that object files are put
in the directory containing source files, even if the Makefile.am is
in another directory. This should start making it feasible to
reduce the number of Makefile.am files we have in the tree, which
will greatly reduce the time to run autogen and configure.
This commit was SVN r7211.
app_context:
mpirun -np 2 -prefix /path/to/ompi/on/machineA ./exec1 : \
-np 2 -prefix /path/to/ompi/on/machineB ./exec2
- Allow with -mca pls_rsh_assume_same_shell 0, the checking for the
SHELL-variable on the actual node (currently 1st node).
Sets the prefix, PATH and LD_LIBRARY_PATH for bash/ksh and
csh/tcsh.
This commit was SVN r7195.
include any optimization flags
- Use these flags to always compile ompi/debuggers/* and orterun so
that parallel debuggers (such as Totalview) can always see the
debugging symbols (see comments in ompi/debuggers/Makefile.am and
orte/tools/orterun/Makefile.am)
- Remove some obsolete LAM-named variables from configure.ac
This commit was SVN r7125.
session directory cleanup (among other things)
- When we get an abnormal exit in orterun (i.e., timeout expires and
we haven't gotten termination notices from all processes), print a
better message an exit in a better way (which includes session
directory cleanup)
- Fix tm and poe pls's to not exit() but rather propagate the error up
the stack (where relevant)
This commit was SVN r7058.
- Change orte_base_infrastructre to orte_infrastructre to conform with
ompi_info's needs
- Move MCA Param registration in ORTE to a centralized function that is
called first in orte_init_stage1
- Set the infrastructre flag as an argument to orte_init
- Adjust initalization functions to properly pass down the infrastructre
flag.
This commit was SVN r7053.
ns_replica.c
- Removed the error logging since I use this function in orte_init_stage1 to
check if we have created a cellid yet or not.
ras_types.h & rase_base_node.h
- This was an empty file. moved the orte_ras_node_t from base/ras_base_node.h
to this file.
- Changed the name of orte_ras_base_node_t to orte_ras_node_t to match the
naming mechanisms in place.
ras.h
- Exposed 2 functions:
- node_insert:
This takes a list of orte_ras_base_node_t's and places them in the Node
Segment of the GPR. This is to be used in orte_init_stage1 for singleton
processes, and the hostfile parsing (see rds_hostfile.c). This just puts
in the appropriate API interface to keep from calling the
orte_ras_base_node_insert function directly.
- node_query:
This is used in hostfile parsing. This just puts in the appropriate API
interface to keep from calling the orte_ras_base_node_query function
directly.
- Touched all of the implemented components to add reference to these new
function pointers
ras_base_select.c & ras_base_open.c
- Add and set the global module reference
rds.h
- Exposed 1 function:
- store_resource:
This stores a list of rds_cell_desc_t's to the Resource Segment.
This is used in conjunction with the orte_ras.node_insert function in
both the orte_init_stage1 for singleton processes and rds_hostfile.c
rds_base_select.c & rds_base_open.c
- Add and set the global module reference
rds_hostfile.c
- Added functionality to create a new cellid for each hostfile, placing
each entry in the hostfile into the same cellid. Currently this is
commented out with the cellid hard coded to 0, with the intention of
taking this out once ORTE is able to handle multiple cellid's
- Instead of just adding hosts to the Node Segment via a direct call to
the ras_base_node_insert() function. First add the hosts to the Resource
Segment of the GPR using the orte_rds.store_resource() function then use
the API version of orte_ras.node_insert() to store the hosts on the Node
Segment.
- Add 1 new function pointer to module as required by the API.
rds_hostfile_component.c
- Converted this to use the new MCA parameter registration
orte_init_stage1.c
- It is possible that a cellid was not created yet for the current environment.
So I put in some logic to test if the cellid 0 existed. If it does then
continue, otherwise create the cellid so we can properly interact with the
GPR via the RDS.
- For the singleton case we insert some 'dummy' data into the GPR. The RAS
matches this logic, so I took out the duplicate GPR put logic, and
replaced it with a call to the orte_ras.node_insert() function.
- Further before calling orte_ras.node_insert() in the singleton case,
we also call orte_rds.store_resource() to add the singleton node to the
Resource Segment.
Console:
- Added a bunch of new functions. Still experimenting with many aspects of the
implementation. This is a checkpoint, and has very limited functionality.
- Should not be considered stable at the moment.
This commit was SVN r6813.
using orteprobe.
Created a header file for orte_setup_hnp. [HNP = Head Node Process]
General cleanup and added a bit of documentation in orte_setup_hnp.c
Also fixed a cellid tokens issue (circa line 285)
Changed the launched scope from private to public
In orteprobe:
- added reference to orted.h to avoid duplicate header contents in orteprobe.h
- removed the version tag, and put in a verbose argument
- Fixed a buffer packing problem that was causing the parent from receiving the
proper contact information for the new daemon.
This commit was SVN r6802.
that were set on the command line. This was techinically exactly the
way the code was designed, but it certainly violated the Law of Least
Astonishment (even to its designer ;-) ). So now if you execute
something like this:
mpirun -mca pls_rsh_debug 1 -np 4 hello
You'll see debugging output from the rsh pls component, as you would
expect (this was not previously the case -- the MCA pls_rsh_debug
parame would be set to 1 in the 4 spawned hello processes, but *not*
in the orterun process).
More specifically, MCA parameters will be set in the orterun process
in the following cases:
- The new command line switch "--gmca" (or "-gmca") is used,
indicating that the MCA parameter is "global". --gmca also means
that that MCA parameter will be applied to all context app's. For
example:
mpirun -gmca foo bar -np 1 hello : -np 2 goodbye
The foo MCA param will be set in both the hello and goodbye
processes.
- If there is only one context app. For example:
mpirun -mca pls_rsh_debug 1 -np 4 hello
will set pls_rsh_debug to 1 in both the orterun process and the 4
spawned hello processes.
Also added a few more comments inside orterun to document a somewhat
confusing use of a state variable in a recursive case.
This commit was SVN r6764.
Somehow, in changing over to the new MCA interfaces, the "set" part of that logic got lost, so the singleton flag was always being set. This should repair some of the anomalous behavior seen recently where the local host was always being used for an application process.
This commit was SVN r6757.
- Add functionality to parse multiple arguments provided in the console
- Cleaned up help function
- Added an option to hide commands from the help menu
Working on launching and reaping of daemons from within the console.
This commit was SVN r6699.
- Added user help messages.
- Abstracted the internal commands, and the mechanism for
parsing and executing them.
- Cleaned up the command line parsing
- Some other misc. cleanup items.
Still much more work to do here, but should provide a more
intuitive interface for extending functionality in the
system.
This commit was SVN r6676.
more user friendly error messages.
Removed the "--version" command line option, since they should
get this from ompi_info [later to be orte_info].
If we find an invalid command line option print out the help
screen before exiting.
This commit was SVN r6670.
1. Fix the reigstry's overwrite logic. It was only overwriting the first keyval specified in a value - the rest were just added on regardless of whether or not the keyval already existed. This was the source of the multiple keyvals some people were seeing - should be fixed now.
2. Change the orted command parsing options so it reports options that aren't recognized - should help reduce confusion
This commit was SVN r6536.
* Add ability to completely disable libltdl (the dlopen code to load
dynamic shared objects) to configure: --disable-dlopen
* Added MCA param (component_disable_dlopen) to disable DSO loading
at runtime
* Made the event library behave in some not-completely-erroneous way
on platforms where it has absolutely no eventops support (ie, no
select, poll, or epoll)
* Disabled orte_wait, opal_few, and opal_daemon_init code on
platforms without fork, waitpid support. All non-init functions
will return OPMI_ERR_NOT_SUPPORTED
* Disable orteprobe tool when fork or pipe aren't supported
This commit was SVN r6490.
* rename ompi_malloc to opal_malloc
* rename ompi_numtostr to opal_numtostr
* start of rename of ompi_environ to opal_environ
This commit was SVN r6332.
* rename ompi_basename to opal_basename
* rename ompi bitop functions to opal
* rename ompi_cmd_line to opal_cmd_line
* rename ompi_sizet2int to opal_sizet2int
* rename orte_daemon_init to opal_daemon_init
* rename ompi_few to opal_few
This commit was SVN r6330.
