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Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
George Bosilca
e361bcb64c Send optimizations.
1. The send path get shorter. The BTL is allowed to return > 0 to specify that the
   descriptor was pushed to the networks, and that the memory attached to it is 
   available again for the upper layer. The MCA_BTL_DES_SEND_ALWAYS_CALLBACK flag
   can be used by the PML to force the BTL to always trigger the callback.
   Unmodified BTL will continue to work as expected, as they will return OMPI_SUCCESS
   which force the PML to have exactly the same behavior as before. Some BTLs have
   been modified: self, sm, tcp, mx.
2. Add send immediate interface to BTL.
   The idea is to have a mechanism of allowing the BTL to take advantage of
   send optimizations such as the ability to deliver data "inline". Some
   network APIs such as Portals allow data to be sent using a "thin" event
   without packing data into a memory descriptor. This interface change
   allows the BTL to use such capabilities and allows for other optimizations
   in the future. All existing BTLs except for Portals and sm have this interface
   set to NULL.

This commit was SVN r18551.
2008-05-30 03:58:39 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
George Bosilca
7a21d77b29 Remove some compilation warnings.
This commit was SVN r17498.
2008-02-18 18:55:32 +00:00
George Bosilca
fa31ec81d0 Add the ownership flags to the PML/BTL interface. The layer
owning the descriptor is responsible for releasing it once
the descriptor is not in use anymore.

This commit was SVN r17497.
2008-02-18 17:39:30 +00:00
George Bosilca
6310ce955c The first patch related to the Active Message stuff. So far, here is what we have:
- the registration array is now global instead of one by BTL.
- each framework have to declare the entries in the registration array reserved. Then
  it have to define the internal way of sharing (or not) these entries between all
  components. As an example, the PML will not share as there is only one active PML
  at any moment, while the BTLs will have to. The tag is 8 bits long, the first 3
  are reserved for the framework while the remaining 5 are use internally by each
  framework.
- The registration function is optional. If a BTL do not provide such function,
  nothing happens. However, in the case where such function is provided in the BTL
  structure, it will be called by the BML, when a tag is registered.

Now, it's time for the second step... Converting OB1 from a switch based PML to an
active message one.

This commit was SVN r17140.
2008-01-15 05:32:53 +00:00
Gleb Natapov
e2e211f23b Add flags parameter to btl_alloc() and btl_prepare_src() functions. If BTL
knows at the time of allocation priority of a descriptor it may do some
optimizations.

This commit was SVN r16901.
2007-12-09 14:08:01 +00:00
Gleb Natapov
7364b7cf47 Add endpoint parameter to btl_alloc() function. Enables various optimizations
inside BTL.

This commit was SVN r16898.
2007-12-09 14:00:42 +00:00
Gleb Natapov
b88b7dedfe Rename btl_rdma_offset to btl_pipeline_send_length.
This commit was SVN r15153.
2007-06-21 07:12:40 +00:00
Galen Shipman
3401bd2b07 Add optional ordering to the BTL interface.
This is required to tighten up the BTL semantics. Ordering is not guaranteed,
but, if the BTL returns a order tag in a descriptor (other than
MCA_BTL_NO_ORDER) then we may request another descriptor that will obey
ordering w.r.t. to the other descriptor.


This will allow sane behavior for RDMA networks, where local completion of an
RDMA operation on the active side does not imply remote completion on the
passive side. If we send a FIN message after local completion and the FIN is
not ordered w.r.t. the RDMA operation then badness may occur as the passive
side may now try to deregister the memory and the RDMA operation may still be
pending on the passive side. 

Note that this has no impact on networks that don't suffer from this
limitation as the ORDER tag can simply always be specified as
MCA_BTL_NO_ORDER.

This commit was SVN r14768.
2007-05-24 19:51:26 +00:00
Gleb Natapov
3ebaff8dfe Implement new BTL parameters:
We eagerly send data up to btl_*_eager_limit with the match
Upon ACK of the MATCH we start using send/receives of size
btl_*_max_send_size up to the btl_*_rdma_pipeline_offset
After the btl_*_rdma_pipeline_offset we begin using RDMA writes of
size btl_*_rdma_pipeline_frag_size.

Now, on a per message basis we only use the above protocol if the
message is larger than btl_*_min_rdma_pipeline_size

btl_*_eager_limit - > same
btl_*_max_send_size -> same
btl_*_rdma_pipeline_offset -> btl_*_min_rdma_size
btl_*_rdma_pipeline_frag_size -> btl_*_max_rdma_size


btl_*_min_rdma_pipeline_size is new..

This patch also moves all BTL common parameters initialisation into
btl_base_mca.c file.

This commit was SVN r14681.
2007-05-17 07:54:27 +00:00
George Bosilca
1cb26e3b9c Finally the convertor export a convenience function to allow a consistent
computation of the current location on the pack/unpack process. This can
be used both for retrieving the pointer to the first byte (in the special
case of the cached RDMA protocol) and for getting the current
position (for the pipelined protocol).

I modified all BTLs, but most of them are still untested.

This commit was SVN r14180.
2007-03-30 22:02:45 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00
Brian Barrett
8900d3ae43 Second take at fixing the issues with using ompi_ptr_t. Add helper functions for converting from .pval to .lval and vice-versa. Users of ompi_ptr_t types should only use one of the fields in the union unless using the helper conversion functions. For the BTLs, local pointers will always be stored in the .pval field and remote pointers always stored in the .lval field.
George wrote the initial patch, I extended it slightly and am responsible for all bugs found.

Refs trac:587

This commit was SVN r13023.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-07 01:48:57 +00:00
Brian Barrett
48ec0b2071 Revert out r12974, 12976, and 12991 as George has provided a less intrusive fix
for now...

This commit was SVN r12997.

The following SVN revision numbers were found above:
  r12974 --> open-mpi/ompi@27cea44a9c
2007-01-04 22:07:37 +00:00
Brian Barrett
27cea44a9c Fix a number of issues with the ompi_ptr_t:
* Make sure that the pval always writes to the correct portion of the
    lval.  This only matters on 32 bit big endian machines.
  * On 32 bit machines when assigning to pval, the other 4 bytes of lval
    weren't being written, which could lead to bogus data

We use macros so that there aren't casts all over the code and the pval
assignment can occur to the correct 4 bytes.  Refs trac:587

This commit was SVN r12974.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-03 19:47:48 +00:00
Gleb Natapov
190e7a27cd Merge with gleb-mpool branch. All RDMA components use same mpool now (rdma).
udapl/openib/vapi/gm mpools a deprecated. rdma mpool has parameter that allows
to limit its size mpool_rdma_rcache_size_limit (default is 0 - unlimited).

This commit was SVN r12878.
2006-12-17 12:26:41 +00:00
Patrick Geoffray
58c6f8c8e1 Copyright update. Thanks to Jeff to remind me.
This commit was SVN r12803.
2006-12-07 23:55:00 +00:00
Patrick Geoffray
6e09b0c23f lval is not defined when pval is assigned on 32 bit systems. this
usually is ok on little-endian systems, as the upper 32 bits will likely
be ignored, but on 32-bit big-endian systems, lval is complete junk.
Use ival if 32 bit mode, lval if 64.

Mixing of 32 and 64 bit architectures won't work without more changes.

This commit was SVN r12802.
2006-12-07 23:34:04 +00:00
Gleb Natapov
b5714d698a Fix compilation with GM version smaller than 2.0. Fix compilation warnings.
This commit was SVN r12386.
2006-11-01 10:26:15 +00:00
George Bosilca
126a68dc9a Big datatype commit. Remove all unused features of the datatype engine. As the memory
allocation logic is completely done outside the data-type engine (in the PML) there is
no need for any special case inside the data-type engine. There is less arguments for
the ompi_convertor_pack and ompi_convertor_unpack as well (the last field free_after is
not required anymore as there is no memory allocated in the engine itself). This change
affect all components using datatypes. I test most of them, but it might happens that I
miss some ... If it's the case please let me know (don't shoot the pianist!!).

This commit was SVN r12331.
2006-10-26 23:11:26 +00:00
George Bosilca
640178c4b3 Grepping through the source files I found these calls to the data-type engine
with the wrong type of arguments.

This commit was SVN r12148.
2006-10-17 21:05:04 +00:00
Galen Shipman
7102d39415 Use OMPI_FREE_LIST_GET not the blocking OMPI_FREE_LIST_WAIT, this allows GM
to take advantage of PML OB1 resource management.. Tested with intel test
suite p2p_c on 4 nodes. 

This commit was SVN r12075.
2006-10-10 14:56:55 +00:00
Galen Shipman
e5c594c211 More updates for the async error handler for btl's
In order to provide backwards compatability the framework versions are bumped
and the handler registeration function is at the end of the btl struct.
Testing done on sm, openib, and gm.. 

This commit was SVN r11256.
2006-08-17 22:02:01 +00:00
Galen Shipman
3b49953ce2 Add error callback to the btl interface, this allows error to be delivered to
the upperlayer assynchronously although there are some issues with this.. such
as there are multiple consumers of the btl's.. who get's the

This commit was SVN r11232.
2006-08-16 20:21:38 +00:00
George Bosilca
7d59a6885b Remove all references to the MRU list. Add back the repost list checks. For some reasons
it decrease the latency by around 0.3 micro-seconds ...

This commit was SVN r10571.
2006-06-29 19:25:44 +00:00
George Bosilca
9bf281bca2 Remove the gm_mru_reg list as it is never used. Cleanup the repost logic. Now we repost
a receive fragment only when we're done with the message from inside and we try to add it
to the list.

This commit was SVN r10564.
2006-06-29 15:10:11 +00:00
George Bosilca
43b7b17033 Release the memory registration when the descriptors get freed.
This commit was SVN r10540.
2006-06-28 15:24:16 +00:00
Galen Shipman
2667c52a5d Track fragments by list, not by size..
-- reviewed by Brian, needs to hit all the branches.. 

This commit was SVN r10078.
2006-05-25 18:07:26 +00:00
Tim Woodall
712468dbef add diagnostic interface
This commit was SVN r9328.
2006-03-17 17:39:41 +00:00
Tim Woodall
c34f4c2cb7 correct cleanup for threaded case
This commit was SVN r9291.
2006-03-16 00:05:39 +00:00
Tim Woodall
8bf6ed7a36 - corrected locking in gm btl - gm api is not thread safe
- initial support for gm progress thread
- corrected threading issue in pml
- added polling progress for a configurable number of cycles to wait for threaded case

This commit was SVN r9188.
2006-03-02 00:39:07 +00:00
Galen Shipman
e58b758031 standardize behavior of btl_alloc, if the size is larger than the max send
size, btl_alloc returns NULL. 

This commit was SVN r9114.
2006-02-22 17:37:59 +00:00
Brian Barrett
566a050c23 Next step in the project split, mainly source code re-arranging
- move files out of toplevel include/ and etc/, moving it into the
    sub-projects
  - rather than including config headers with <project>/include, 
    have them as <project>
  - require all headers to be included with a project prefix, with
    the exception of the config headers ({opal,orte,ompi}_config.h
    mpi.h, and mpif.h)

This commit was SVN r8985.
2006-02-12 01:33:29 +00:00
George Bosilca
e5158142b9 The lb should be extracted from the datatype not from the convertor.
This commit was SVN r8446.
2005-12-10 23:27:20 +00:00
Tim Woodall
1929a97d2f corrections for MPI_BOTTOM
This commit was SVN r8429.
2005-12-09 23:27:55 +00:00
Jeff Squyres
42ec26e640 Update the copyright notices for IU and UTK.
This commit was SVN r7999.
2005-11-05 19:57:48 +00:00
Tim Woodall
c944988b9e merge in changes from release branch - acquire/release send token for put/get
This commit was SVN r7784.
2005-10-17 18:59:28 +00:00
Tim Woodall
3b4a134a24 - removed unused define
- correct free to release registration rather than retain it

This commit was SVN r7611.
2005-10-04 14:33:26 +00:00
Brian Barrett
7b20370306 * pretty-print an error message if a btl component loads but can't find
any NICs to use
* Make mvapi, gm, and mx components all publish information, even if there
  are no NICs available so that modex_recv doesn't hang.  If there are no
  NICs available, don't set the reachable bit, but don't do anything
  to fail.  This unfortunately doesn't cover the hangs that will result if
  different procs load different sets of components, but it's a start

This commit was SVN r7550.
2005-09-30 04:39:44 +00:00
Galen Shipman
26a74d42fa release, not retain on gm_free
This commit was SVN r7535.
2005-09-28 20:18:52 +00:00
Galen Shipman
808b2c1c53 threaded build fix for btl_gm..
This commit was SVN r7409.
2005-09-16 17:18:15 +00:00
George Bosilca
ad0c0cdc03 Make the GM btl compile again. There were just some typos.
This commit was SVN r7352.
2005-09-13 20:19:21 +00:00
Galen Shipman
d932cfd342 merge of rcache work into the trunk.. lotsa fun ;-)..
I regression tested before the merge, I will regression test tonight and
correct issues that might have crept in. 

This commit was SVN r7329.
2005-09-12 22:28:23 +00:00
George Bosilca
c9fb1f32f2 And more dependencies fixes. The big commit will follow shortly.
This commit was SVN r7319.
2005-09-12 20:22:59 +00:00
Galen Shipman
8e1e2eec3d Misc fixes for threaded builds..
This commit was SVN r6874.
2005-08-14 19:03:09 +00:00
Brian Barrett
9a83910165 * Change Myrinet/gm btl and mpool to use configure.m4 instead of
configure.stub

This commit was SVN r6608.
2005-07-26 21:56:36 +00:00
Tim Woodall
3553333ef8 removed debug
This commit was SVN r6570.
2005-07-20 21:13:24 +00:00
Tim Woodall
7fa40e84ae fix test against max send tokens
This commit was SVN r6531.
2005-07-15 20:56:29 +00:00
Tim Woodall
70fb6fbe21 maintain mru list of registrations for leave pinned option
This commit was SVN r6505.
2005-07-14 22:27:11 +00:00