ports/openmpi
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Автор SHA1 Сообщение Дата
Jeff Squyres
d1ce64f049 Fix some "malloc of 0 bytes" warnings 
This commit was SVN r28713.
 2013-07-03 12:05:33 +00:00
Brian Barrett
81efd0e3cf Properly shut down Portals collective component 
This commit was SVN r28707.
 2013-07-02 22:07:27 +00:00
Brian Barrett
133dafd3dc First take at Barrier and Ibarrier, both of which seem to work. 
This commit was SVN r28706.
 2013-07-02 21:42:10 +00:00
Brian Barrett
c4577723ed fix misuse of param api 
This commit was SVN r28705.
 2013-07-02 21:41:42 +00:00
Brian Barrett
c9a8217af6 Portals 4 doesn't have a BTL, need to default to MTL, rather than finding some stupid slow BTL. THis selection logic sucks. 
This commit was SVN r28704.
 2013-07-02 21:18:04 +00:00
Brian Barrett
e4698f5cd4 Shell of the Portals 4 collectives componetn 
This commit was SVN r28703.
 2013-07-02 15:23:55 +00:00
George Bosilca
fe012cdc2b Use the converted value instead of calling the macro again. 
This commit was SVN r28701.
 2013-07-02 11:33:18 +00:00
Joshua Ladd
5d2d5e958c Deleting garbage I accidentally committed. Thanks, Nathan\! 
This commit was SVN r28698.
 2013-07-01 22:50:54 +00:00
Joshua Ladd
d7a50343bf Per the details and schedule outlined in the attached RFC, Mellanox Technologies would like to CMR the new 'coll/hcoll' component. This component enables Mellanox Technologies' latest HPC middleware offering - 'Hcoll'. 'Hcoll' is a high-performance, standalone collectives library with support for truly asynchronous, non-blocking, hierarchical collectives via hardware offload on supporting Mellanox HCAs (ConnectX-3 and above.) To build the component, libhcoll must first be installed on your system, then you must configure OMPI with the configure flag: '--with-hcoll=/path/to/libhcoll'. Subsequent to installing, you may select the 'coll/hcoll' component at runtime as you would any other coll component, e.g. '-mca coll hcoll,tuned,libnbc'. This has been reviewed by Josh Ladd and should be added to cmr:v1.7:reviewer=jladd 
This commit was SVN r28694.
 2013-07-01 22:39:43 +00:00
George Bosilca
ae190246df Oops, thanks Jeff for noticing. 
This commit was SVN r28693.
 2013-07-01 17:51:52 +00:00
George Bosilca
e665cda6c2 Add the empty basic component where the function pointer from the 
base will be copied over. Without such a decoy component the
entire framework will not function correctly.

This commit was SVN r28692.
 2013-07-01 17:47:44 +00:00
George Bosilca
dc1e68c3c1 Remove the item from the list before releasing it. 
This commit was SVN r28691.
 2013-07-01 16:54:48 +00:00
George Bosilca
702e669636 Remove a [very] annoying warning. 
This commit was SVN r28690.
 2013-07-01 16:49:13 +00:00
George Bosilca
5fae72b9aa Add the MPI 2.2 MPI_Dist_graph functionality. 
This patch reshape the way we deal with topologies completely. Where
our topologies were mainly storage components (they were not capable
of creating the new communicator), the new version is built around a
[possibly] common representation (in mca/topo/topo.h), but the functions
to attach and retrieve the topological information are specific to each
component. As a result the ompi_create_cart and ompi_create_graph functions
become useless and have been removed.

In addition to adding the internal infrastructure to manage the topology
information, it updates the MPI interface, and the debuggers support and
provides all Fortran interfaces.

This commit was SVN r28687.
 2013-07-01 12:40:08 +00:00
George Bosilca
b82abf6bef Silence a compiler warning. 
This commit was SVN r28686.
 2013-07-01 11:40:42 +00:00
Rolf vandeVaart
adda653fc1 Fix two bugs from previous commit. 
This commit was SVN r28684.
 2013-06-28 16:32:51 +00:00
Rolf vandeVaart
850d325f32 Adjust how search is done for dynamic load of library. CUDA only. 
This commit was SVN r28683.
 2013-06-27 22:13:25 +00:00
Jeff Squyres
e3d0782788 Move the assignment after the bozo check. 
This commit was SVN r28669.
 2013-06-22 12:38:32 +00:00
Rolf vandeVaart
5ebb74bee3 Fix case where amount of data sent is less than expected. Otherwise, we will get hang when running the RGET protocol. 
Reviewed by hjelm,bosilca.

This commit was SVN r28667.
 2013-06-21 18:35:16 +00:00
Joshua Ladd
0b5c1f2ea8 Add 'generic' support for PMI2 (previously, we checked for PMI2 only on Cray systems.) If your resource manager (e.g. SLURM) has support for PMI2, then the --with-pmi configure flag will enable its usage. If you don't have PMI2, then you will fallback to regular old PMI1. This patch was submitted by Ralph Castain and reviewed and pushed by Josh Ladd. This should be added to cmr:v1.7:reviewer=jladd 
This commit was SVN r28666.
 2013-06-21 15:28:14 +00:00
Jeff Squyres
2e5c18195b We want to ignore this MPI extension in the general case -- it's just 
an example (and outputs stuff to stdout!).

This commit was SVN r28654.
 2013-06-19 16:01:45 +00:00
Mike Dubman
d1c82994be fix: detect threading model to take appropriate flow in mxm 
This commit was SVN r28648.
 2013-06-16 08:40:06 +00:00
Jeff Squyres
a0b27f5b28 Better comment than what was submitted in r28614. 
This commit was SVN r28631.

The following SVN revision numbers were found above:
  r28614 --> open-mpi/ompi@9556310bd0
 2013-06-13 20:52:44 +00:00
Matthias Jurenz
ebf441ba4b Changes to VT: Fixed infinite recursion bug if the verbosity level (env. VT_VERBOSE) is higher or equal to 2 
This commit was SVN r28624.
 2013-06-13 07:33:22 +00:00
Jeff Squyres
34fb0712c4 Per https://svn.mpi-forum.org/trac/mpi-forum-web/ticket/256, we need 
to set *flag=1 when source == MPI_PROC_NULL.

cmr:v1.7.2:reviewer=dgoodell
cmr:v1.6.5:reviewer=dgoodell

This commit was SVN r28621.
 2013-06-12 21:38:07 +00:00
Nathan Hjelm
db9bce0926 Add destructors for MPI_T error codes 
This commit was SVN r28618.
 2013-06-12 14:58:14 +00:00
Matthias Jurenz
ba9bc238ee attempt to fix #3627: Pass all configure options from the OMPI top-level configure to the OTF sub-configure 
This commit was SVN r28616.
 2013-06-12 13:39:21 +00:00
Mike Dubman
9556310bd0 cosmetic: add comment with rationale for malloc.h include 
This commit was SVN r28614.
 2013-06-12 05:58:32 +00:00
Nathan Hjelm
9b1f32bf12 BTL: add flags for signaled BTL operations 
As per discussion in the June 2013 developer meeting these
flags will be used by the PML in the future to request
asynchronous progress on an operation. The naming was chosen
to reflect that a BTL supports this mode (MCA_BTL_FLAG_SIGNALED)
and that a descriptor should "signal" the remote side to wake
up and progress the message (MCA_BTL_DES_FLAG_SIGNAL).

Future commits will update OB1 to take advantage of this
feature when performing the RDMA get or RDMA rendezvous
protocols.

This commit was SVN r28612.
 2013-06-11 21:52:20 +00:00
Jeff Squyres
bf7f9b1f41 Fix minor typo in man page. 
This commit was SVN r28606.
 2013-06-10 13:44:48 +00:00
Mike Dubman
d18b3ae1a7 fix malloc deprication error with gcc 4.6.3 on ubuntu/fedora 
This commit was SVN r28605.
 2013-06-09 18:13:16 +00:00
George Bosilca
d789423d34 Typo. 
This commit was SVN r28603.
 2013-06-08 10:44:02 +00:00
Vishwanath Venkatesan
0b727f84da Avoid malloc of zero bytes, add a check and avoid it. 
This commit was SVN r28597.
 2013-06-06 14:08:57 +00:00
Edgar Gabriel
2d4655a05a Logic has been revised compared to the previous implementation. 
This commit was SVN r28594.
 2013-06-05 23:47:42 +00:00
Edgar Gabriel
03c1db7a3a fix the calculation of the UNIFORM flag. 
This commit was SVN r28593.
 2013-06-05 23:18:50 +00:00
Vishwanath Venkatesan
7d6a05982a Removing the gather_array based on the flag UNIFORM FVIEW for read all operations (dynamic/static), 
+ Disabling Timing data extraction by default in dynamic write all

This commit was SVN r28592.
 2013-06-05 21:35:37 +00:00
Vishwanath Venkatesan
55878674d7 1. Removing the allgather_array based on the flag UNIFORM FVIEW. This is not really and optimization. 
2. Fixing some of the debug printf's these are outdated.

This commit was SVN r28591.
 2013-06-05 21:30:15 +00:00
Jeff Squyres
713e3aa3db Refs trac:3626: that ticket specifically refers to the v1.6 branch; this 
commit is the trunk version of what is needed for #3626.

Add the "ignore_device" field to the INI file.  This allows us to
specifically list devices that should be ignored by the openib BTL
(such as the Intel Phi, at least as of May 2013 -- see #3626).  

Also add the Intel Phi to the ini file, and set its ignore_device=1.

Finally, add the concept of counting intentionally ignored verbs
devices.  Devices are ignored for one of two reasons:

 * If the number of allowed ports on that device is 0 (i.e., if
   if_include/if_exclude was set such that we're intentionally
   ignoring this device).
 * If the INI ignore_device field for this device is set to 1.

Once we have the count of devices that were intentionally ignored,
only show the "Hey, there's verbs devices that you're not using!"
show_help message if there are devices that were ''unintentionally''
ignored.

This commit was SVN r28589.

The following Trac tickets were found above:
  Ticket 3626 --> https://svn.open-mpi.org/trac/ompi/ticket/3626
 2013-06-05 12:12:09 +00:00
Jeff Squyres
3019b7a3f8 Oops! Remove duplicate registration. 
This commit was SVN r28588.
 2013-06-05 11:55:19 +00:00
Jeff Squyres
1de00b17ad Properly check the return status from registering the MCA params. 
This commit was SVN r28587.
 2013-06-05 11:53:18 +00:00
Nathan Hjelm
e48bd9809e Add useful messages for MPI_T error codes 
This commit was SVN r28584.
 2013-06-04 23:18:44 +00:00
Jeff Squyres
d692aba672 Remove the DR PML. It was abondoned long ago. It had a nice life, 
a few papers, and now a decent demise with respect.  

This commit was SVN r28582.
 2013-06-04 19:36:16 +00:00
Jeff Squyres
d1dc4da292 Fix typo (the debugger might not be TotalView). 
This commit was SVN r28577.
 2013-05-31 00:39:05 +00:00
Edgar Gabriel
87b3782b7f arghh, copy-and-paste error, status->_ucount has to be set to 0 not max_data for count=0. 
This commit was SVN r28576.
 2013-05-30 22:00:29 +00:00
Edgar Gabriel
9daec82f17 - make a fileview of 0 bytes work in ompio 
- fixes the bug reported in ticket 3619 (which is already closed) also for ompio

This commit was SVN r28575.
 2013-05-30 21:33:13 +00:00
Rolf vandeVaart
3d1d158a80 Do not abort in BTL. Rather, callback into PML error function. Thanks George for review. 
This commit was SVN r28559.
 2013-05-23 18:45:23 +00:00
George Bosilca
a9aae9c538 Patch based on Takahiro Kawashima fixing the issues with some 
of the Fortran datatypes. This patch prevent the copy of the
datatype description from the OPAL to the OMPI layer in order
to decrease the memory requirements.

This commit was SVN r28553.
 2013-05-22 18:35:21 +00:00
Jeff Squyres
43a534a5c6 Revert r28544: the original code was fine. 
This commit was SVN r28549.

The following SVN revision numbers were found above:
  r28544 --> open-mpi/ompi@c830d96673
 2013-05-21 16:06:08 +00:00
Jeff Squyres
c830d96673 Silence compiler warnings, as suggested by Alan Sayre. 
This commit was SVN r28544.
 2013-05-21 13:42:18 +00:00
Nathan Hjelm
721779d7ab Per RFC: remove old MCA parameter system. 
This commit was SVN r28541.
 2013-05-20 15:36:13 +00:00