Wouldn't be so bad, except...the errmgr orders the termination of ALL procs, which kills any other job that should have been left alone.
Add a new proc and job state indicating "killed_by_cmd" so we can tell the difference between a proc/job that was deliberately terminated by us vs one that is killed by external signal.
This change was tested to ensure it didn't interfere with ctrl-c operation (it doesn't - we order termination of all jobs when we get a ctrl-c).
This commit was SVN r22100.
- add an orte ftb notifier help file for more verbose error messages
- check if we can connect to the FTB during component->query and close
the component, if we cannot.
- make the ftb component interface methods static.
- add mca parameters to set override the default subscription style and
priority.
This commit was SVN r22011.
1. ensure that orte_rmaps_base_schedule_policy does not override cmd line settings
2. when you try to bind to more cores than we have, generate a not-enough-processors error message
3. allow npersocket -bind-to-core combination - because, yes, somebody actually wants to do it.
This commit was SVN r21996.
This commit looks larger than it really is since it includes a fair amount of code cleanup.
The SIGSTOP/SIGCONT+checkpointing work uses some of the functionality in r20391. Basic use case below (note that the checkpoint generated is useable as usual if the stopped application is terminated).
{{{
shell 1) mpirun -np 2 -am ft-enable-cr my-app
... running ...
shell 2) ompi-checkpoint --stop -v MPIRUN_PID
[localhost:001300] [ 0.00 / 0.20] Requested - ...
[localhost:001300] [ 0.00 / 0.20] Pending - ...
[localhost:001300] [ 0.01 / 0.21] Running - ...
[localhost:001300] [ 1.01 / 1.22] Stopped - ompi_global_snapshot_1234.ckpt
Snapshot Ref.: 0 ompi_global_snapshot_1234.ckpt
shell 2) killall -CONT mpirun
... Application Continues execution in shell 1 ...
}}}
Other items in this commit are mostly cleanup that has been sitting off-trunk for too long:
* Add a new {{{opal_crs_base_ckpt_options_t}}} type that encapsulates the various options that could be passed to the CRS. Currently only TERM and STOP, but this makes adding others ''much'' easier.
* Eliminate ORTE_SNAPC_CKPT_STATE_PENDING_TERM, since it served a redundant purpose with the new options type.
* Lay some basic ground work for some future features.
This commit was SVN r21995.
The following SVN revision numbers were found above:
r20391 --> open-mpi/ompi@0704b98668
1. default -npersocket to force -bind-to-socket
2. if we cannot get a value for cores/socket, try using #logical cpus. otherwise, default to 1 core
3. add missing error message for not-enough-processors
4. since we no longer loop through orte_register_params twice, put the auto-detect of
topology info in the rte_init for hnp and std_orted
5. fix bind-to-core, bysocket combination
This commit was SVN r21992.
The new options work by adding an ":if-avail" qualifier to the "bind-to-socket" and "bind-to-core" MCA params. If the system does not support this capability, the job will launch anyway. Without the qualifier, the job will abort with an error message indicating that the required functionality is not supported on this system.
This commit was SVN r21975.
For some historical reasons, we didn't use select() for the Windows events. Now it could be merged back to have a better performance on Windows.
This commit was SVN r21899.
1. finalize the logic for properly respecting externally assigned bindings. Thanks to Chris Samuel for his help with this. Still needs some acid testing, but appears to now work.
2. remove the double-logic of requiring opal_paffinity_alone AND bind-to-foo. If the user specifies bind-to-foo, trust her and just do it.
This commit was SVN r21885.
#if defined (c_plusplus)
defined (__cplusplus)
followed by
extern "C" {
and the closing counterpart by BEGIN_C_DECLS and END_C_DECLS.
Notable exceptions are:
- opal/include/opal_config_bottom.h:
This is our generated code, that itself defines BEGIN_C_DECL and
END_C_DECL
- ompi/mpi/cxx/mpicxx.h:
Here we do not include opal_config_bottom.h:
- Belongs to external code:
opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.c
opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.h
- opal/include/opal/prefetch.h:
Has C++ specific macros that are protected:
- Had #if ... } #endif _and_ END_C_DECLS (aka end up with 2x
END_C_DECLS)
ompi/mca/btl/openib/btl_openib.h
- opal/event/event.h has #ifdef __cplusplus as BEGIN_C_DECLS...
- opal/win32/ompi_process.h: had extern "C"\n {...
opal/win32/ompi_process.h: dito
- ompi/mca/btl/pcie/btl_pcie_lex.l: needed to add *_C_DECLS
ompi/mpi/f90/test/align_c.c: dito
- ompi/debuggers/msgq_interface.h: used #ifdef __cplusplus
- ompi/mpi/f90/xml/common-C.xsl: Amend
Tested on linux using --with-openib and --with-mx
The following do not contain either opal_config.h, orte_config.h or
ompi_config.h
(but possibly other header files, that include one of the above):
ompi/mca/bml/r2/bml_r2_ft.h
ompi/mca/btl/gm/btl_gm_endpoint.h
ompi/mca/btl/gm/btl_gm_proc.h
ompi/mca/btl/mx/btl_mx_endpoint.h
ompi/mca/btl/ofud/btl_ofud_endpoint.h
ompi/mca/btl/ofud/btl_ofud_frag.h
ompi/mca/btl/ofud/btl_ofud_proc.h
ompi/mca/btl/openib/btl_openib_mca.h
ompi/mca/btl/portals/btl_portals_endpoint.h
ompi/mca/btl/portals/btl_portals_frag.h
ompi/mca/btl/sctp/btl_sctp_endpoint.h
ompi/mca/btl/sctp/btl_sctp_proc.h
ompi/mca/btl/tcp/btl_tcp_endpoint.h
ompi/mca/btl/tcp/btl_tcp_ft.h
ompi/mca/btl/tcp/btl_tcp_proc.h
ompi/mca/btl/template/btl_template_endpoint.h
ompi/mca/btl/template/btl_template_proc.h
ompi/mca/btl/udapl/btl_udapl_eager_rdma.h
ompi/mca/btl/udapl/btl_udapl_endpoint.h
ompi/mca/btl/udapl/btl_udapl_mca.h
ompi/mca/btl/udapl/btl_udapl_proc.h
ompi/mca/mtl/mx/mtl_mx_endpoint.h
ompi/mca/mtl/mx/mtl_mx.h
ompi/mca/mtl/psm/mtl_psm_endpoint.h
ompi/mca/mtl/psm/mtl_psm.h
ompi/mca/pml/cm/pml_cm_component.h
ompi/mca/pml/csum/pml_csum_comm.h
ompi/mca/pml/dr/pml_dr_comm.h
ompi/mca/pml/dr/pml_dr_component.h
ompi/mca/pml/dr/pml_dr_endpoint.h
ompi/mca/pml/dr/pml_dr_recvfrag.h
ompi/mca/pml/example/pml_example.h
ompi/mca/pml/ob1/pml_ob1_comm.h
ompi/mca/pml/ob1/pml_ob1_component.h
ompi/mca/pml/ob1/pml_ob1_endpoint.h
ompi/mca/pml/ob1/pml_ob1_rdmafrag.h
ompi/mca/pml/ob1/pml_ob1_recvfrag.h
ompi/mca/pml/v/pml_v_output.h
opal/include/opal/prefetch.h
opal/mca/timer/aix/timer_aix.h
opal/util/qsort.h
test/support/components.h
This commit was SVN r21855.
The following SVN revision numbers were found above:
r2 --> open-mpi/ompi@58fdc18855
I have no machine which allows me to do external binding, so I will have to ask others to test the new logic. However, I did verify that these changes don't break the existing logic when no external bindings were present.
This commit was SVN r21842.
Add a capability to parse the rankfile to extract node information in place of requiring both hostfile and rankfile for non-RM managed environments. The rankfile is -only- parsed for this IF the hostfile and -host options are not given. Otherwise, those are used to establish allocation info as we did before this commit.
This commit was SVN r21815.
Adds several new mpirun options:
* -bysocket - assign ranks on a node by socket. Effectively load balances the procs assigned to a node across the available sockets. Note that ranks can still be bound to a specific core within the socket, or to the entire socket - the mapping is independent of the binding.
* -bind-to-socket - bind each rank to all the cores on the socket to which they are assigned.
* -bind-to-core - currently the default behavior (maintained from prior default)
* -npersocket N - launch N procs for every socket on a node. Note that this implies we know how many sockets are on a node. Mpirun will determine its local values. These can be overridden by provided values, either via MCA param or in a hostfile
Similar features/options are provided at the board level for multi-board nodes.
Documentation to follow...
This commit was SVN r21791.
the BATCH_PARTITION_ID anymore, use the ras-alps-command.sh script to
figure out the jobs ID to query from ALPS.
Gracefully report errors, update the help file and parse the sysconfig file
This commit was SVN r21772.
variables that are not initialized and are declared in a file that
doesn't export any globally visible function are marked as
non-initialized constants, i.e. uninitialized common symbols. For some
obscure reasons, they get removed from the object files on Mac OS X.
So far I found two solution to this problem. One require the addition
of "-c" to the linker command, the second one (corresponding to this
patch) force them to became a common initialized symbol.
This commit was SVN r21739.
When we read the input buffer, we don't always get a complete printf output - we sometimes end mid stream. We still need to add the suffix and a <CR> to keep the output working right.
This commit was SVN r21706.
"critical" - any error at or above the critical severity will be reported (i.e., only critical errors)
"warning" - any error at or above the warning severity will be reported (i.e., warning and critical errors)
"notice" - pretty much everything will be reported
Default to "critical" to keep down the chatter.
Obviously, only places that call orte_notifier will be affected - all other error reporting (e.g., via opal_output calls) is unaffected.
This commit was SVN r21693.
Add ability to store the RM's jobid string to tag the notifier message so that the sys admin knows what job had the problem.
This commit was SVN r21687.
Remove all architecture references from ORTE and put them back in the modex using modex_send/recv calls.
Hetero operations are now fully supported again. Comm_spawn now works up to the point where it segfaults due to an error in the CID code - which now allows Edgar to dig further! :-)
This commit was SVN r21655.
making it possible to claim relative hosts from the hostfile/scheduler
by using +n# hostname, where 0 <= # < np
ex:
cat ~/work/svn/hpc/dev/test/Rankfile/rankfile
rank 0=+n0 slot=0
rank 1=+n0 slot=1
rank 2=+n1 slot=2
rank 3=+n1 slot=1
This commit was SVN r21557.
prepare the send buffer, and post the collective order to the local daemon. It
then register the callback and return fromthe modex exchange. It will only
wait for this modex completion when the modex_recv is called. Meanwhile, the
daemon will do the allgather.
This commit was SVN r21543.
Add two options for plm process module, i.e. remote_env_prefix for getting OMPI prefix on remote computer by reading its user environment variable (OPENMPI_HOME), and remote_reg_prefix is similar, but it reads the registry on the remote computer. Reading remote env prefix has a higher priority than reading reg prefix, so that user can use their own installation of OMPI.
This commit was SVN r21538.
It never set the daemon launch counter before launching.
In the output for 'total job launch time' make the message match that of the SLURM PLM for easier parsing.
This commit was SVN r21527.
coded binomial approach. Now, the PLM extract the children information from the
routed component, and the startup follow the routed topology. As a side effect,
we can now launch using linear or radix topologies, in addition to the previously
binomial topology.
This commit was SVN r21514.
the message to update the structures, but instead use the information from
the URI. The reason is that even the launch report messages can get routed.
Deal with the orted_cmd_line in a single location.
This commit was SVN r21513.
Normally, any non-windows nodes should return NodeStatus_Unreachable, but that's not true. We have noticed that Scientific Linux cluster nodes, which are in the same subnet as the Windows nodes, return NodeStatus_PendingApproval value, and the RAS CCP takes them as Windows nodes. So let's just use the "Ready" nodes.
This commit was SVN r21510.
that now the HNP send the messages using the routed component. In the case
of tree spawn, when a intermediary node spawn a child it doesn't know how
to forward a message to it, so when the node-map message is coming from
the HNP (as there is nothing yet in the contact/routing table) the message
is sent back the way it came. As a result the node-map message keeps jumping
between the HNP and the first level orteds.
The solution is to add a new option to the children orte_parent_uri, which
is only set when the orted is _not_ directly spawned by the HNP. When this
option is present on the argument list, the orted will add the parent to
its routing, and force the parent to update his routes (by sending the URI).
With this approach, the routing tree is build in same time as the processes
are spawned, and all messages from the HNP can be routed to the leaves.
However, this is far from an optimal solution. Right now, this so called tree
spawn, only spawn the children in a tree without doing anything about the
"connect back to the HNP" step. The HNP is flooded with reports from all the
orted. The total number of messages is higher than in the non tree startup
scheme, so we do not expect this approach to be scalable in the current
incarnation. A complete overhaul of the tree startup is required in order
improve the scalability. Stay tuned!
This commit was SVN r21504.
The open/select of the PLM is done in orte/mca/ess/base/ess_base_std_orted.c. It only is done when the PLM MCA param is set directing a specific PLM be selected. The function
orte_plm_base_orted_append_basic_args
clears the params passed to the daemon of any PLM selection passed to the HNP. Each PLM then adds a PLM directive if-and-only-if backend PLM support is desired. At present, Torque, SLURM, and rsh all specify this support and direct that the backend orted open the "rsh" PLM.
This commit was SVN r21488.
The following SVN revision numbers were found above:
r21480 --> open-mpi/ompi@ed585bce8a
If we do not initialize the PML, non-HNP daemons will not be able to use its functions. For example, RSH needs it when the tree_spawn mode is
enabled: daemons call orte_pml.remote_spawn() function to spawn their children in the deployment tree.
This commit was SVN r21480.
Update the loop_spawn test to remove a sleep so that it runs at max speed, letting the new code catch when we overrun ourselves and wait for room to be cleared for the next comm_spawn.
This commit was SVN r21390.
in this directory and it's causing "make dist" to break.
Shiqing -- is there a missing file in this directory? If so, please
add it and restore the EXTRA_DIST line I just removed. Thanks!
This commit was SVN r21340.
way to have no abort message is to pass NULL (the errmanager is smart
enough to handle this case and not emit any extra message).
This commit was SVN r21311.
Emit a more informative error message when the file descriptor limit is
reached during an accept() call. Also, abort when the accept fails to
avoid an infinite loop.
Emit a more informative error message when the help file can't be opened.
This commit was SVN r21271.
The following Trac tickets were found above:
Ticket 1930 --> https://svn.open-mpi.org/trac/ompi/ticket/1930
messages when delivering a signal (like STOP or CONT)
to a non-existant process. This fixes trac:1929.
Also, only print one error message in the other cases.
This commit was SVN r21263.
The following Trac tickets were found above:
Ticket 1929 --> https://svn.open-mpi.org/trac/ompi/ticket/1929
Add a new tm ess module that exploits this capability.
Update the various plm modules to enable it - just a minor change reflecting an added param to a plm base function.
Additional fixes included:
1. remove an erroneous cleanup of session directories in the tool finalize procedure - tools don't create session directories to begin with!
2. fix a duplicate free when attempting to execute a non-existent app
3. cleanup an typo in the comm utilities
4. fix comm_spawn - was perturbed by the changes in pack/unpack of orte_job_t to properly support orte-ps
Been tested on slurm and tm machines, using all tests in orte/test/mpi. May run into issue with command line length on large jobs due to inclusion of node info to support static ports - will fix this next with addition of regexp generator to compress that info.
This commit was SVN r21248.
