ports/openmpi
ports/openmpi
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Автор SHA1 Сообщение Дата
Todd Kordenbrock
4358e75a75
Merge pull request #7866 from tkordenbrock/topic/master/portals4.fix-inappropriate-use-of-abort 
portals4: fix inappropriate use of abort() in mtl-portals4 and coll-portals4 components
 2020-06-30 08:46:03 -05:00
Austen Lauria
a26e494953
Merge pull request #7882 from devreal/osc-rdma-noncontig-requests 
osc rdma: check for outstanding fragments before completing a request (II)
 2020-06-29 09:51:47 -04:00
Joseph Schuchart
caed3b2eed osc rdma: check for outstanding fragments before completing a request in ompi_osc_rdma_put_complete_flush as well 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-26 22:19:21 +02:00
Austen Lauria
5fa7ca7c15
Merge pull request #7858 from tkordenbrock/topic/master/portals4.call-pml-add_procs 
mtl-portals4: use the active PML to call add_procs()
 2020-06-26 14:56:57 -04:00
Joseph Schuchart
2c36d37033
Merge pull request #7871 from devreal/osc-ucx-rget-rput-fetch-alignment 
OSC UCX: make sure no-op fetch in rget/rput is properly aligned
 2020-06-26 15:58:51 +02:00
Joseph Schuchart
1314ef7668 OSC UCX: Remove stale free from merge conflict 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-25 19:01:53 +02:00
Joseph Schuchart
634f67b216
Merge pull request #7843 from devreal/clang-tidy-free 
Some fixups for issues detected by clang-tidy
 2020-06-25 17:30:04 +02:00
Artem Polyakov
907f4e196a
Merge pull request #6980 from devreal/ucx-acc-singel-intrinsics 
UCX osc: add support for acc_single_intrinsic
 2020-06-25 07:39:42 -07:00
Joseph Schuchart
c1f7776341 OSC UCX: make sure no-op fetch in rget/rput is properly aligned 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-25 16:16:58 +02:00
Austen Lauria
7814f4195c
Merge pull request #7845 from devreal/stack-fixes 
Fix unexpected optimizations detected by STACK
 2020-06-25 08:15:09 -04:00
Todd Kordenbrock
04b94637dd mtl-portals4: replace abort() with ompi_rte_abort() 
coll-portals4: replace abort() with ompi_rte_abort()

Signed-off-by: Todd Kordenbrock <thkgcode@gmail.com>
 2020-06-24 11:31:26 -05:00
Joseph Schuchart
e3b417c776 Add missing copyright header 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
e215eff43d UCX osc: atomic fetch-and-op only on 32 and 64bit values 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
434c9055ee UCX osc: fall back to get-compare-put for unsupported datatypes 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
7d5a6e3e8b UCX osc: safely load/store 64bit integer from variable size pointer 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
5f786bcce4 UCX osc: make MPI_Fetch_and_op non-blocking if possible 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
d8696aa8c4 UCX osc: centralize decision on whether to use AMOs 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
427d4bd226 UCX osc: do not acquire accumulate lock if exclusive lock was taken 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
471d76777a UCX osc: fence active operations before releasing accumulate lock and free memory if required 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
4d7a3856fa UCX osc: Use accumulate for operations/datatypes that are not covered by UCX 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
899f58cef5 UCX osc: simplify output address computation 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
d888b4fd76 UCX osc: correctly handle MPI_NO_OP 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
7cfc0e71da UCX osc: allow to asynchronously compare-and-swap 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
557ae80858 UCX osc: allow for overlap with (some) request-based atomic operations 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
1a3c6bbf35 UCX osc: re-use value returned by cswap to save additional get 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
8606a02b87 UCX osc: fix macro parameter name usage in OMPI_OSC_UCX_REQUEST_RETURN 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
d448efd49c UCX osc: properly clean up requests in case of errors 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
73a183408f UCX osc: add support for acc_single_intrinsic info key / mca param 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Todd Kordenbrock
0a637967fa Use the active PML to call add_procs() 
ompi_mtl_portals4_get_endpoint() was incorrectly making a direct
call to ompi_mtl_portals4_add_procs().  Instead use the actve PML
to call add_procs().  If add_procs() fails, call ompi_rte_abort()
to terminate the job.

Signed-off-by: Todd Kordenbrock <thkgcode@gmail.com>
 2020-06-22 16:56:16 -05:00
Nathan Hjelm
a3e276fb03
Merge pull request #7829 from devreal/osc-rdma-noncontig-requests 
osc rdma: check for outstanding transfers before completing a request
 2020-06-22 08:43:29 -06:00
Joseph Schuchart
d9d18acd49 Fix unintended optimizations detected by STACK 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-22 10:32:22 +02:00
Joseph Schuchart
d310a20ecb Add missing free calls to mca_topo_treematch_dist_graph_create 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 14:30:07 +02:00
Joseph Schuchart
e23dcca448 Add missing free calls to osc/ucx 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 14:30:07 +02:00
Joseph Schuchart
ede3c0840a Add missing free calls to osc/sm component_select 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:33:34 +02:00
Joseph Schuchart
d9b11b29cd Properly free memory in case of error in mca_common_ompio_prepare_to_group 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:31:14 +02:00
Joseph Schuchart
ed1ca1a84b Don't free memory escaping mca_common_ompio_prepare_to_group 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:30:38 +02:00
Joseph Schuchart
9a60f5b7fb Add missing free calls to ompi_coll_base_reduce_intra_basic_linear 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:27:36 +02:00
Joseph Schuchart
8e24c0d532 Add missing free calls to ompi_coll_base_allgather_intra_bruck 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:24:56 +02:00
Joseph Schuchart
85ed26f2f8 osc rdma: check for outstanding fragments before completing a request 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-16 17:45:00 +02:00
Edgar Gabriel
4a8a330bba common/ompio: use avg. file view size in the aggregator selection logic 
This is a fix  based on a bugreport on github/mailing list from CGNS.
The core of the problem was that different processes entered different branches of
our aggregator selection logic, due to the fact that in some cases processes had
a matching file_view size and contiguous chunk size (thus assuming 1-D distribution),
and some processes did not (thus assuming 2-D distribution). The fix is to calculate
the avg. file view size across all processes and use this value, thus ensuring that
all processes enter the same branch.

Fixes issue #7809

Signed-off-by: Edgar Gabriel <egabriel@central.uh.edu>
 2020-06-15 09:17:44 -05:00
Sergey Oblomov
df0f2ac026 OMPI/HCOLL: fixed typo in vars description 
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
 2020-05-29 20:13:35 +03:00
bosilca
2b1f053345
Merge pull request #7758 from wckzhang/fixdynamic 
coll/tuned: Fix dynamic message size for gather and scatter
 2020-05-22 14:15:32 -04:00
Michael Heinz
e21c31f54c
Merge pull request #7722 from mwheinz/mwheinz-7721 
Add check for PSM2 reference counting to PSM2 MTL #7721
 2020-05-19 08:06:41 -04:00
Michael Heinz
f10305a49f Add check for PSM2 reference counting to PSM2 MTL #7721 
As discussed, a feature is being added to libpsm2 to correctly handle
the case where the library is opened by multiple OMPI transports in the same
process. (For example, the OFI BTL and the PSM2 MTL).

* Improved error message to indicate required libpsm2 version.

* Adds a test at autogen/configure time for the existence of
  PSM2_LIB_REFCOUNT_CAP.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: Michael Heinz <michael.william.heinz@intel.com>
 2020-05-18 15:25:22 -04:00
William Zhang
50823fe9a9 coll/tuned: Fix dynamic message size for gather and scatter 
The gather and scatter operations did not use the correct message size
(Only did datatype size * com size). This did not correctly reflect the
total message size and prevents fine tuning within a com size. This
patch multiplies the value by the number of elements sent.

Signed-off-by: William Zhang <wilzhang@amazon.com>
 2020-05-14 12:17:52 -07:00
Howard Pritchard
f744668f5f
Merge pull request #7646 from hppritcha/topic/ofi_common_wl 
add a common ofi whitelist/blacklist
 2020-05-13 06:44:05 -06:00
Michael Heinz
4a5622a436
Merge pull request #7713 from mwheinz/master-7699 
PSM2: Call add_procs through PML
 2020-05-13 07:59:43 -04:00
Michael Heinz
548060e43f PSM2: Call add_procs through PML 
Change ompi_mtl_ofi_get_endpoint() to call the active PML's add_procs()
rather than the OFI MTL add_procs() directly when discovering a new
process during operation.

Functionally, this has no impact in correct operation. However, the
current behavior means that the heterogenous and active PML checks
are not being executed in the dynamic discovery case.

Signed-off-by: Michael Heinz <michael.william.heinz@intel.com>
 2020-05-12 12:35:39 -04:00
Howard Pritchard
9f1081a07a add a common ofi whitelist/blacklist 
also add common verbose variable.

Note the verbosity thing is a little tricky owing to the way the MCA frameworks and components are registered and
and initialized.  The BTL's are registered/initialized prior to the MTL components even getting registered.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2020-05-09 14:50:31 -06:00
Michael Heinz
dbbdb8f2e2
Merge pull request #7621 from jsquyres/pr/remove-osc-pt2pt 
Remove OSC pt2pt component
 2020-05-08 12:43:57 -04:00