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Граф коммитов

7975 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
40b7643119 osc_sm_passive_target.c: ensure ret is always defined
Fixes a compiler warning
2015-04-13 11:31:43 -04:00
Ralph Castain
3e44d3c9e3 Enable singletons to run without any active OOB module until they attempt to comm_spawn 2015-04-10 14:06:42 -07:00
Nathan Hjelm
eb56117405 Merge pull request #513 from hjelmn/mca_bug_fixes
opal: fix multiple bugs in MCA and opal
2015-04-08 10:29:44 -06:00
Nathan Hjelm
9cd955badf opal: fix multiple bugs in MCA and opal
This commit fixes the following bugs:

 - opal_output_finalize did not properly set internal state. This
   caused problems when calling the sequence opal_output_init (),
   opal_output_finalize (), opal_output_init ().

 - opal_info support called mca_base_open () but never called the
   matching mca_base_close (). mca_base_open () and mca_base_close ()
   have been updated to use a open count instead of an open flag to
   allow mca_base_open to be called through multiple paths (as may be
   the case when MPI_T is in use).

 - orte_info support did not register opal variables. This can cause
   orte-info to not return opal variables.

 - opal_info, orte_info, and ompi_info support have been updated to
   use a register count.

 - When opening the dl framework the reference count was added to
   ensure the framework stuck around. The framework being closed
   prematurely was a bug in the MCA base that has since been
   corrected. The increment (and associated decrement) have been
   removed.

 - dl/dlopen did not set the value of
   mca_dl_dlopen_component.filename_suffixes_mca_storage on each call
   to register. Instead the value was set in the component
   structure. This caused the value to be lost when re-loading the
   component. Fixed by setting the default value in register.

 - Reset shmem framework state on close to avoid returning a stale
   component after reloading opal/shmem.

 - MCA base parameters were not properly deregistered when the MCA
   base was closed.

This commit may fix #374.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-04-07 19:13:20 -06:00
Howard Pritchard
5ee18f4f00 Merge pull request #514 from hppritcha/topic/mpi_win_lock_all_man
man pages: fix problem with MPI_Win_lock_all
2015-04-07 17:17:30 -06:00
Howard Pritchard
291c775e74 man pages: fix problem with MPI_Win_lock_all
thanks to Thomas Jahns for pointing this out -

http://www.open-mpi.org/community/lists/users/2015/04/26633.php

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-04-07 16:29:00 -06:00
Nathan Hjelm
2409715fc3 Merge pull request #511 from hjelmn/osc_pt2pt_fix
osc/pt2pt: fix synchronization bugs
2015-04-07 09:14:00 -06:00
Howard Pritchard
fc3a0f60c5 Merge pull request #512 from hppritcha/topic/java_better_dlopen_error
ompi/java: better error message if dlopen fails
2015-04-06 14:08:10 -06:00
Howard Pritchard
18039b34b4 ompi/java: better error message if dlopen fails
The error message emitted by ompi/java when dlopen
fails is misleading and not very informative.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-04-06 13:35:09 -06:00
Nathan Hjelm
80ed805a16 osc/pt2pt: fix synchronization bugs
The fragment flush code tries to send the active fragment before
sending any queued fragments. This could cause osc messages to arrive
out-of-order at the target (bad). Ensure ordering by alway sending
the active fragment after sending queued fragments.

This commit also fixes a bug when a synchronization message (unlock,
flush, complete) can not be packed at the end of an existing active
fragment. In this case the source process will end up sending 1 more
fragment than claimed in the synchronization message. To fix the issue
a check has been added that fixes the fragment count if this situation
is detected.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-04-06 08:39:19 -06:00
Jithin Jose
9c937d44ae Inline MTL-OFI
Signed-off-by: Jithin Jose <jithin.jose@intel.com>

Conflicts:
	ompi/mca/mtl/ofi/mtl_ofi_recv.c
2015-04-03 15:19:30 -07:00
Jithin Jose
50304dfe05 Inline mtl-datatype pack/unpack
Signed-off-by: Jithin Jose <jithin.jose@intel.com>
2015-04-03 15:19:21 -07:00
Jithin Jose
c09582a3ff - CM blocking send/recv optimizations
This patch tries to do as little as possible in the PML CM blocking
    send/receive routines.  Basically, avoid creating and filling in an
    entire request object.  An OMPI-level request is still needed, but we
    can create that on the stack instead of going to a free list.

Signed-off-by: Andrew Friedley <andrew.friedley@intel.com>
Signed-off-by: Jithin Jose <jithin.jose@intel.com>
2015-04-03 15:19:08 -07:00
Howard Pritchard
05324e32ff fcoll/static: coverity fixes
Fix CIDs 72138, 72139, 72143

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-04-02 14:51:44 -06:00
Devendar Bureddy
6ddc7ac35c HCOLL: Fix assertion
hcoll context may not be destroyed if it is cached.
2015-04-01 20:33:28 +03:00
Nathan Hjelm
e91084e20b Merge pull request #492 from hjelmn/subarray_fix
ompi/datatype: fix subarray datatype
2015-03-27 10:50:46 -06:00
Devendar Bureddy
71c28cea65 HCOLL: hcoll dte fixes
- hcoll currently do not support datatype with gaps around it (i.e dtsize !=
dtextent)
    - check for user defined Ops.
2015-03-25 16:04:11 +02:00
Nathan Hjelm
88072f9b8b ompi/datatype: fix subarray datatype
The subarray datatype was not packing/unpacking correctly. This was
leading to wrong results whenever the lb of the subarray datatype was
non-zero.

I tracked the issue to the use of ompi_datatype_create_resized. This
function simply duplicates the old datatype and sets the lb and
extent. This is unfortunately insufficent for the pack/unpack
functions which use the loop end first element offset NOT the lb. This
offset is 0 in the resized datatype. Once ompi_datatype_create_resized
has been fixed this commit should be reverted.

Fixes #380.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-03-24 14:33:10 -06:00
Nathan Hjelm
f588ad7af0 Merge pull request #485 from hjelmn/info_enums
ompi/info: add support for getting info key value based on variable enumerator
2015-03-23 11:43:22 -06:00
Nathan Hjelm
9299cd5cd7 ompi/info: add support for getting info key value based on variable
enumerator

This commit adds a function that will return an integer value for an
info key based on the value returned by a variable enumerator. This
feature should greatly simplify code using the info keys (osc for
example).

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-03-23 11:20:37 -06:00
Howard Pritchard
edf9e8ba8f mtl/psm: coverity fixes
Fix CIDS 1270176 - 1270179

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-03-18 11:02:01 -06:00
Nathan Hjelm
ccba8ce856 Merge pull request #457 from hjelmn/mpit_fixes
mca/base: fix bugs in framework deregistration/re-registration
2015-03-18 08:37:49 -06:00
Ralph Castain
0cfb4f29aa Silence compiler warning 2015-03-16 09:59:21 -07:00
Todd Kordenbrock
515d9e8cc9 mtl-portals4: fix compiler warnings 2015-03-12 20:34:04 -05:00
adrianreber
714d9aa67e Merge pull request #348 from adrianreber/topic/orte_cr_continue_like_restart
Topic/orte cr continue like restart
2015-03-12 14:54:02 +01:00
Alina Sklarevich
28586caecf MTL_MXM/PML_YALLA: fix coverity issues. 2015-03-12 11:49:22 +02:00
Howard Pritchard
da85d5fc0a Merge pull request #467 from hppritcha/topic/minor_fcoll_static_coverity_fix
fcoll/static: minor fix for coverity
2015-03-11 10:28:05 -06:00
Nathan Hjelm
ce6caab2a7 Merge pull request #463 from hjelmn/cuda_async
btl/openib: cuda: fix CUDA-aware support with async copy
2015-03-11 09:52:48 -06:00
Howard Pritchard
66fee3bd18 fcoll/static: minor fix for coverity
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-03-11 09:11:49 -06:00
Adrian Reber
c08e234af7 FT: fix compilation using --with-ft (5/5)
Enabling the FT code breaks compilation (again). This series
tries to fix the compiler errors. This is again only fixing
the compiler errors without any warranty that the result
might actually support FT again.

With the changes introduced in the previous patches in this series
some goto constructs for cleanup are no longer necessary and removed.
2015-03-11 14:23:33 +01:00
Adrian Reber
9b84fe45d3 FT: fix compilation using --with-ft (3/5)
Enabling the FT code breaks compilation (again). This series
tries to fix the compiler errors. This is again only fixing
the compiler errors without any warranty that the result
might actually support FT again.

Follow-up of 552c9ca5a0. This patch
implements the necessary changes in mentioned commit in the FT code.
2015-03-11 14:23:33 +01:00
Adrian Reber
1c5a8df724 FT: fix compilation using --with-ft (2/5)
Enabling the FT code breaks compilation (again). This series
tries to fix the compiler errors. This is again only fixing
the compiler errors without any warranty that the result
might actually support FT again.

The FT code used barrier mechanisms which have been removed
with aec5cd08bd. This patch replaces
all those different barriers with opal_pmix.fence(NULL, 0);
I am not sure this is completely correct but at least a starting
point for a review.
2015-03-11 14:23:33 +01:00
Adrian Reber
f45dd069bd FT: fix compilation using --with-ft (1/5)
Enabling the FT code breaks compilation (again). This series
tries to fix the compiler errors. This is again only fixing
the compiler errors without any warranty that the result
might actually support FT again.

This first patch moves orte_cr_continue_like_restart from ORTE
to opal_cr_continue_like_restart in OPAL. This only leaves three
calls from OPAL to ORTE in the FT code. As it is not yet 100%
clear how to handle these calls the code orte_sstore.set_attr()
has been #ifdef'd out for now.
2015-03-11 14:23:33 +01:00
Alina Sklarevich
f9a9b936a1 PML_YALLA: fix compilation warnings. 2015-03-11 10:58:54 +02:00
Nathan Hjelm
3d32dbd793 btl/openib: cuda: fix CUDA-aware support with async copy
This commit should resolve an issue seen with CUDA-aware support. The
problem came in with BTL 3.0. Before 3.0 the size of the copy was
stored in the incoming segment's des_remote_count field. This field
does not exist in BTL 3.0 so I stored the value in the
des_segment_count field. This caused problems with the cuda support
code. To fix the issue the endpoint pointer is now stored in the in
fragment's endpoint pointer which free's up the segment's des_cbdata
pointer for storing the transfer size.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-03-10 14:38:12 -06:00
Nathan Hjelm
d929137768 osc/pt2pt: need to unlock self before waiting for unlock acks
This commit fixes a bug in osc/pt2pt which causes MPI_Win_unlock_all
to hang. The problem was caused by code refactoring that moved the
unlock of the local process to after the loop that waits for unlock
acks. This will cause the code to loop forever waiting on the self
ack.

Fixes #444
2015-03-10 14:10:37 -06:00
Yohann Burette
d48a8ab8f0 mtl/ofi: Use fi_allocinfo(). 2015-03-10 12:50:55 -07:00
Jeff Squyres
2e8ee003b0 ofi: endpoint type hint moved to a sub-struct, BUFFERED went away
Update to match	new libfabric API/structure change.
2015-03-10 09:55:45 -07:00
Howard Pritchard
b73d566d57 Merge pull request #454 from hppritcha/topic/coverity_fixes
fcoll/dynamic: coverity fixes
2015-03-10 07:59:56 -06:00
Mike Dubman
6f91a007e1 Merge pull request #458 from yosefe/topic/pml-yalla-fix-segv
keep mxm context alive as long as pml_yalla component is open.
2015-03-10 13:38:14 +02:00
yosefe
976144dca7 keep mxm context alive as long as pml_yalla component is open.
pml_yalla_del_comm may be called after yalla module is finalized, which
leads to invalid memory access if mxm context is already destroyed in
this point.
2015-03-10 11:52:44 +02:00
Nathan Hjelm
005c6022e2 mca/base: fix bugs in framework deregistration/re-registration
There were a number of bugs in the framework/variable code that
affected deregistration:

 - Frameworks could be erroneously closed if seperately registered and
   opened then subsequently closed. This was a bug in the original
   design which only reference counted opens but not
   registrations. This would cause undefined behavior if
   MPI_T_finalize actually calls ompi_info_close_components as
   intended. Now both registrations and opens are reference counted
   and frameworks/components are not torn down until the matching
   number of close calls have been made.

 - group_find_by_name did not pass the invalidok flags down
   to mca_base_var_group_get_internal correctly.

 - Group deregistration caused the group to be completely reset. This
   does not match the behavior required by MPI_T as it could reduce
   the number of variables/subgroups in a group.

This commit also updates MPI_T_finalize to call
ompi_info_close_components as originally intended.

Closes #374

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-03-09 16:52:53 -06:00
Howard Pritchard
fba88360a8 fcoll/dynamic: more coverity fixes
Okay coverity seems to get one stuck in a loop where
by fixing one set of resource allocation problems, it
starts finding more.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-03-09 15:01:05 -07:00
Howard Pritchard
2d61a652c8 fcoll/dynamic: coverity fixes
okay, hopefully really fix CIDS 72325-72328, and 72330-72332.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-03-09 13:53:52 -07:00
Nathan Hjelm
0d80bfb391 Merge pull request #443 from hjelmn/mpit_31
Add new error code introduced in MPI-3.1.
2015-03-09 13:03:15 -06:00
Jeff Squyres
a026456bef (orte|ompi|oshmem)*info tools: convert to opal_dl interface
Noe that this commit removes option:lt_dladvise from the various
"info" tools output.  This technically breaks our CLI "ABI" because
we're not deprecating it / replacing it with an alias to some other
"into" tool output.

Although the dl/libltdl component contains an "have_lt_dladvise" MCA
var that contains the same information, the "option:lt_dladvise"
output from the various "info" tools is *not* an MCA var, and
therefore we can't alias it.  So it just has to die.
2015-03-09 08:18:13 -07:00
Jeff Squyres
c683500a29 debuggers: convert to opal_dl interface 2015-03-09 08:16:55 -07:00
Gilles Gouaillardet
6de973daae coll/sm: remove unused value
as reported by Coverity with CID 1269962
2015-03-09 17:31:32 +09:00
Gilles Gouaillardet
1896d4fba7 bcol/basesmuma: fix misc memory leak
as reported by Coverity with CID 715762
2015-03-09 17:22:25 +09:00
Gilles Gouaillardet
341bdd1fc3 ompi/group: refactor ompi_group_incl
and fixes CID 70478
2015-03-09 17:07:11 +09:00