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Граф коммитов

26790 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
3c18f2f1d9 Merge pull request #2924 from hjelmn/ras_slurm
ras/slurm: fix compile error due to missing header
2017-02-06 09:33:58 -07:00
Gilles Gouaillardet
d4d4cab5bf orte/util: fix OPAL_HAVE_ZLIB usage
use #if instead of #ifdef

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-02-05 16:24:10 +01:00
Geoff Paulsen
4917e44a7d Merge pull request #2832 from jjhursey/topic/ibm/osc-base-dt-abort
osc/base: Detect unsupported data types and abort
2017-02-05 04:26:04 -06:00
Carlos Bederián
ccea3de44c amd64 timers: use lfence instead of cpuid for serialization
Signed-off-by: Carlos Bederián <bc@famaf.unc.edu.ar>
2017-02-04 18:50:29 -03:00
Carlos Bederián
4009ba6b94 opal_progress: use usec native timer only when a native cycle counter isn't available
Signed-off-by: Carlos Bederián <bc@famaf.unc.edu.ar>
2017-02-04 18:31:14 -03:00
Howard Pritchard
f4ad119693 Merge pull request #2914 from hppritcha/topic/nbc_compiler_warning
swat some compiler warnings
2017-02-04 11:56:52 -05:00
Artem Polyakov
9f7e2098ac orte: Fix MPI_Spawn
Register namespace even if there is no node-local processes that
belongs to it. We need this for the MPI_Spawn case.

Addressing https://github.com/open-mpi/ompi/issues/2920.
Was introduced in be3ef77739.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2017-02-04 12:07:00 +07:00
Nathan Hjelm
b928a6b9ea ras/slurm: fix compile error due to missing header
On some systems this component fails to build due to the missing
netdb.h header.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-02-03 15:22:34 -07:00
Nathan Hjelm
1c4b735f5f oob/tcp: cleanup peers before event bases
This commit fixes an error in teardown where the event bases are town
down before the peer structures are released. This causes us to call
event_del on an invalid event base. At best this makes valgrind
complain and at worst this causes aborts or segvs.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-02-03 15:18:41 -07:00
Howard Pritchard
acaecb2448 swat some compiler warnings
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2017-02-03 08:28:15 -07:00
Ralph Castain
ead453ee8e Merge pull request #2911 from rhc54/topic/retry
For performance, try to send the oob/tcp message a few times before dropping back into the event library
2017-02-02 12:57:18 -08:00
Ralph Castain
b661275dba For performance, try to send the oob/tcp message a few times before dropping back into the event library
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-02-02 06:44:15 -08:00
Gilles Gouaillardet
e879d2910a coll/tuned: make coll_tuned_gather_algorithms MCA settable
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-02-02 11:00:38 +09:00
Ralph Castain
50ca9fb66b Merge pull request #2893 from rhc54/topic/sim
Cleanup the ras simulator capability, and the relay route thru grpcomm
2017-02-01 16:17:40 -08:00
Ralph Castain
230d15f0d9 Cleanup the ras simulator capability, and the relay route thru grpcomm
direct. Don't resend wireup info if nothing has changed

Fix release of buffer

Correct the unpacking order

Fix the DVM - now minimized data transfer to it

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-02-01 15:01:58 -08:00
Nathan Hjelm
362ac8b87e osc/pt2pt: fix threading issues
This commit fixes a number of threading issues discovered in
osc/pt2pt. This includes:

 - Lock the synchronization object not the module in osc_pt2pt_start.
   This fixes a race between the start function and processing post
   messages.

 - Always lock before calling cond_broadcast. Fixes a race between
   the waiting thread and signaling thread.

 - Make all atomically updated values volatile.

 - Make the module lock recursive to protect against some deadlock
   conditions. Will roll this back once the locks have been
   re-designed.

 - Mark incoming complete *after* completing an accumulate not
   before. This was causing an incorrect answer under certain
   conditions.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-02-01 10:33:01 -07:00
Ralph Castain
a9d836bae3 Merge pull request #2890 from rhc54/topic/alps
Correct the path to the ORTE data dir - allows master to be built with --no-ompi
2017-02-01 07:47:33 -08:00
Ralph Castain
8bf3ac828c Correct the path to the ORTE data dir - allows master to be built with --no-ompi
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-02-01 07:30:18 -07:00
Howard Pritchard
e62fca896f Merge pull request #2889 from hppritcha/topic/fix_ess_alps_makefie
ess/alps: fix problem in makefile
2017-02-01 05:46:51 -05:00
Howard Pritchard
db4039f565 ess/alps: fix problem in makefile
./autogen.pl --no-ompi doesn't work without this
fix when alps can be configured.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2017-01-31 21:56:16 -06:00
Gilles Gouaillardet
02558134ef coll/base: remove unused local variable
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-02-01 11:54:17 +09:00
Gilles Gouaillardet
ad44ecb2ba pml/base: initialize global variables
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-02-01 11:49:47 +09:00
bosilca
c331e6794c Allow all tuned MCA parameters to be modified programatically. (#2829)
Fix a comment in the MCA header.

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2017-01-31 21:47:36 -05:00
Ralph Castain
6cb484a3cb Merge pull request #2887 from rhc54/topic/update
Update to latest PMIx master
2017-01-31 11:05:37 -08:00
Jeff Squyres
45b791542c Merge pull request #2809 from jjhursey/fix/ibm/opal-verbose
opal/output: Make sure verbose gets updated when id 0 gets updated.
2017-01-31 12:18:38 -05:00
Josh Hursey
5fcd69da52 Merge pull request #2831 from jjhursey/topic/ibm/pml-bsend
pml/base: Expose some bsend varaibles so PMLs may reference them
2017-01-31 10:31:42 -06:00
Josh Hursey
31faf0a950 Merge pull request #2861 from jjhursey/topic/ibm/master/orted-timeout-improv
orterun: Add parameter to control when we give up on stack traces
2017-01-31 10:25:57 -06:00
Ralph Castain
edcfdf2365 Update to latest PMIx master
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-31 08:01:37 -08:00
Yossi
0b822522fb Merge pull request #2883 from alex-mikheev/topic/oshmem_mem_prefetch
oshmem: mem use hook: apply code review fixes
2017-01-30 12:39:04 +02:00
Alex Mikheev
ea3ea4835b oshmem: mem use hook: apply code review fixes
Signed-off-by: Alex Mikheev <alexm@mellanox.com>
(cherry picked from commit a422154a141f0be5b92d2b6c26d7b2b4176dfe18)
2017-01-30 11:30:20 +02:00
Gilles Gouaillardet
6c9ba35d2d Merge pull request #2880 from ggouaillardet/topic/red_sched_chain
coll/libnbc: fix the red_schain algo of ireduce with MPI_IN_PLACE
2017-01-30 15:08:03 +09:00
Gilles Gouaillardet
9bcadbd51b coll/libnbc: fix the red_schain algo of ireduce with MPI_IN_PLACE
this fixes a regression introduced in open-mpi/ompi@045d0c5f4c

Fixes open-mpi/ompi#2879

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-30 14:19:45 +09:00
Gilles Gouaillardet
b12ab2b4f2 Merge pull request #2857 from ggouaillardet/topic/pmix_ext11
pmix/ext11 fixes, plugs and rename
2017-01-30 11:44:07 +09:00
Gilles Gouaillardet
b078e57e73 pmix/ext1x: fix misc memory leaks in namespace registration
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-30 10:52:42 +09:00
Gilles Gouaillardet
f51fc293a2 ext1x/pmix1x_client: plug misc memory leaks
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-30 10:52:42 +09:00
Gilles Gouaillardet
022cca79ea pmix/ext1x: plug a memory leak in opal_lkupcbfunc()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-30 10:52:36 +09:00
Gilles Gouaillardet
f485d12a82 pmix: rename the ext11 component into ext1x
also use the same naming scheme thann pmix/ext2x

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-30 10:52:35 +09:00
Gilles Gouaillardet
dccb1899e6 pmix/ext11: correctly use PMIx_server_register_nspace()
PMIx_server_register_nspace() is an asynchronous operation, so
the pmix glue wait for it completes before returning.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-30 09:23:19 +09:00
Gilles Gouaillardet
6955e1e25c pmix/ext11: fix compilation
the argc field from the opal_pmix_app_t struct was removed,
so adjust the pmix/ext11 glue accordingly.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-30 09:23:18 +09:00
Ralph Castain
7ab26a4946 Merge pull request #2878 from rhc54/topic/scaling
Add new platform files. Modify scaling.pl to support ppn option
2017-01-29 15:57:04 -08:00
Ralph Castain
28abe78f8c Add new platform files. Modify scaling.pl to support ppn option
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-29 15:55:49 -08:00
Mike Dubman
048d47df48 Merge pull request #2874 from yosefe/topic/pml-yalla-fix-dt-leak
yalla: fix memory leak with blocking non-contig send.
2017-01-29 19:36:37 +02:00
Yossi Itigin
13c3bf0dd7 yalla: fix memory leak with blocking non-contig send.
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2017-01-29 18:51:43 +02:00
Yossi
149ecef289 Merge pull request #2845 from alex-mikheev/topic/oshmem_mem_prefetch
oshmem: spml: add memory allocation hook
2017-01-29 14:15:01 +02:00
Alex Mikheev
9da9e6260d
oshmem: spml ucx: on error print ucx error string
Signed-off-by: Alex Mikheev <alexm@mellanox.com>
2017-01-29 10:28:24 +02:00
Ralph Castain
2b2ea2fed2 Merge pull request #2869 from rhc54/topic/staticports
Fix static port and partial allocation operations
2017-01-28 11:03:11 -08:00
Ralph Castain
b59ae14a2a Fix static port and partial allocation operations
Fix static port wireup by recording the TCP port mpirun is using and correctly passing the regex of hosts to the daemons. Do a better job of closing sockets on failed connection attempts. Correctly identify the remote host in the associated error message.

Fix partial allocation operations by not attempting to set #slots on nodes that were not used, and thus don't have a daemon or topology assigned to them

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-28 10:09:44 -08:00
Howard Pritchard
47450eb282 Merge pull request #2868 from hppritcha/topic/typo_fix
mca help: fix typo found by user
2017-01-28 09:53:47 -07:00
Howard Pritchard
fca45a2742 mca help: fix typo found by user
Fix typo found by @pozdneev

Fixes #2821

bot:notest

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2017-01-28 09:37:43 -07:00
Ralph Castain
06ef1aafb1 Merge pull request #2867 from rhc54/topic/spawn
Cleanup a typo that can cause a segfault
2017-01-27 17:45:25 -08:00