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George Bosilca
113b45b4e6 Add support for the new MPI_Type_create_hindexed_block (MPI 3.0). 
This commit was SVN r26962.
 2012-08-07 12:48:30 +00:00
George Bosilca
3e288aaef6 Indentation. 
This commit was SVN r26961.
 2012-08-07 12:46:47 +00:00
George Bosilca
ba879c2c51 Remove the unused map. 
This commit was SVN r26960.
 2012-08-07 12:06:13 +00:00
George Bosilca
2303cd0bdb Remove initialized but unused variables. 
This commit was SVN r26959.
 2012-08-07 12:05:25 +00:00
Shiqing Fan
2f442799f8 fix several typecasts 
This commit was SVN r26957.
 2012-08-07 10:41:53 +00:00
Yael Dayan
7895cd1114 adding a fragmentation mechanism to the Get flow in function mca_pml_ob1_recv_request_progress_rget 
This commit was SVN r26956.
 2012-08-07 07:15:21 +00:00
Jeff Squyres
7fe860c8a2 Per http://www.open-mpi.org/community/lists/devel/2012/08/11362.php, 
there actually are some cases where we don't want to uniq-ize all
flags.  Thanks to P. Martin for raising the issue.

This commit was SVN r26955.
 2012-08-06 21:05:11 +00:00
Jeff Squyres
0b7b3feba9 Minor fix for the command line parser: we didn't previously 
distinguish between unknown ''options'' (i.e., command line options
that are registered and have some meaning) and unknown ''tokens''
(i.e., strings that do not begin with "-").  Hence, if you did:

   mpirun --fo my_mpi_program

(when perhaps you meant to type "--foo", mpirun would complain that no
such executable "--fo" existed.  That is ''correct,'' but perhaps not
completely useful.  It is more accurate for mpirun to report that
there is no such "--fo" option.

This change to cmd_line.c makes it so that we will ''always'' report
errors regarding tokens that begin with "-".

This commit was SVN r26953.
 2012-08-06 17:13:08 +00:00
Vasily Filipov
fc712182db MTL MXM: make MXM use MXM_VERSION macro for MXM version checking. 
This commit was SVN r26952.
 2012-08-06 06:35:57 +00:00
Ralph Castain
1f8df92c3c Remove the confusion over which options are "to" and which are "by" by creating synonyms so that either spelling works. 
This commit was SVN r26951.
 2012-08-05 14:40:38 +00:00
Ralph Castain
53b1a1c976 Cleanly error out when someone asks to map-to <object> if that object doesn't exist on a node. 
This commit was SVN r26950.
 2012-08-04 21:52:36 +00:00
Ralph Castain
61b09a132b Fix bynode mapping of multiple app-contexts 
This commit was SVN r26949.
 2012-08-03 21:45:40 +00:00
Ralph Castain
96f6f94c24 Ensure we don't get trapped in an infinite loop when ranking bynode if something isn't right 
This commit was SVN r26948.
 2012-08-03 21:45:10 +00:00
Ralph Castain
0d878937fe If a callback is set in the state machine, and the state doesn't yet exist, create it 
This commit was SVN r26947.
 2012-08-03 21:43:36 +00:00
Ralph Castain
431d5361ed For those who really preferred our prior mode of operation that mapped procs and only launched daemons on the nodes that had procs on them, introduce the "novm" state machine component. This recreates the old mode of operation by re-ordering the launch sequence so that we allocate, then map, and then launch daemons only on the reqd nodes (instead of across the entire allocation). 
This commit was SVN r26946.
 2012-08-03 16:30:05 +00:00
Ralph Castain
dc22ea5cde A little cleaner on the message about repeated ctrl-c, and re-enable the event so we can abort if we see multiple ctrl-c's that don't meet the time requirement 
This commit was SVN r26945.
 2012-08-03 01:26:18 +00:00
Ralph Castain
89f3754559 Bring in the rest of MPI-3 Ticket #125 changes, including changes to mpi.h, function param lists, and associated documentation. 
This commit was SVN r26944.
 2012-08-03 01:09:59 +00:00
Ralph Castain
e6c72bfd53 Ensure we can forcibly exit even when we are stuck inside of an event by replacing the libevent signal handler with a POSIX one that (a) attempts to trip a libevent termination event and (b) if anothe ctrl-c hits within 5 seconds, just calls exit. 
This commit was SVN r26943.
 2012-08-02 21:15:35 +00:00
Ralph Castain
bf701f6c55 Make PMPI match MPI defs 
This commit was SVN r26942.
 2012-08-02 16:58:04 +00:00
Ralph Castain
8b595ddf84 Complete changes specified in MPI-3 Ticket #125. Still holding on proposed change to MPI_Init as it remains under discussion (and is just plain uuuugly). No action taken on changing string arrays as that part of #125 was not included in the final pdf text. 
This commit was SVN r26939.
 2012-08-02 16:31:02 +00:00
Jeff Squyres
91ccba9643 Minor enhancements to the hwloc base: 
* NULL's out the hwloc_obj_t->userdata in
   hwloc_base_util.c:free_object() and
   hwloc_base_util.c:opal_hwloc_base_free_topology() after it has been
   OBJ_RELEASE'd.
 * Adds a userdata field to opal_hwloc_topo_data_t.  This field will
   be used in an upcoming rmaps component ("lama") to cache some
   associated data during hardware tree traversals.

This commit was SVN r26938.
 2012-08-02 16:29:44 +00:00
Ralph Castain
d818c9d407 Includes a patch from Jeff and Josh: update the simulator module to allow specification of multiple slot and max_slot counts for each node group (but don't require it). Remove the requirement that each node group provide its own topology. Adjust verbosities to allow showing some light debug output to see what nodes have been added without getting a bunch of other stuff. 
This commit was SVN r26936.
 2012-08-02 04:57:13 +00:00
Jeff Squyres
62c2ff7ee7 It's actually ''not'' an error to exit if all routes and children are 
gone.  So exit with 0, not ORTE_ERROR_DEFAULT_EXIT_CODE (which is 1).

This fixes a race condition in the rsh launcher upon termination,
where ORTE would sometimes think that a daemon failed to launch.

This commit was SVN r26935.
 2012-08-01 19:49:19 +00:00
Ralph Castain
05845214b8 Add missing include file 
This commit was SVN r26934.
 2012-08-01 04:08:47 +00:00
Nathan Hjelm
4557e15c18 oob/ud fix compile error 
This commit was SVN r26933.
 2012-07-31 21:50:34 +00:00
Ralph Castain
6ee35e4977 Add num_local_peers to orte_process_info so we don't keep re-computing it, ensure it is available for direct launch via pmi as well 
This commit was SVN r26931.
 2012-07-31 21:21:50 +00:00
Jeff Squyres
88cbe9c780 .ompi_ignore this component until it can be fixed. 
This commit was SVN r26930.
 2012-07-31 21:02:06 +00:00
Nathan Hjelm
980692804d oob/ud: don't start listening for ud requests unless we have one usable port 
This commit was SVN r26929.
 2012-07-31 19:00:18 +00:00
Jeff Squyres
92adbc5d72 Fix some problems with the Fortran wrapper compiler flags, 
particularly with respect to threading flags.  

Before this change, the following scenario would fail (e.g., on Linux
with pthreads):

{{{
$ ./configure --disable-shared --enable-static ...
$ make clean install
$ cd examples
$ make clean all
}}}

Linking the Fortran examples would fail with missing pthread symbols.

This commit was SVN r26927.
 2012-07-31 18:12:24 +00:00
Matthias Jurenz
79a065290c Changes to OTF: 
- general:
		- incremented version number to 1.11.2openmpi
	- lib OTFAUX:
		- speed-up messages matching, if no snapshots should be generated

Changes to VT:
	- general:
		- incremented version number to 5.13.1openmpi
	- compiler wrappers:
		- vtnvcc:
			- add path to cuda.h to the PDT parser command
			- exclude *.cu source files from instrumenting with PDT/TAU; the PDT parser is not (yet) able to handle CUDA statements and kernels
	- vtunify:
		- fixed timestamp boundary check for merging asynchronous plugin counters (i.e. async. timestamp must >= process' start timestamp)
		- fixed timestamp conversion from local to global
		- print percentage of message matching bumps (unmatched or reversed messages)
		- inlined key-value list "record handler"
		- minor optimizations in hook for merging async. events:
			- search async. source manager only once per stream
			- don't call writeRecHook_Event() if no async. source key is defined

This commit was SVN r26925.
 2012-07-31 08:45:37 +00:00
Vasily Filipov
c386847d9a MTL MXM: Adding MXM version protect for Mprobe, Mrecv resources. 
This commit was SVN r26922.
 2012-07-31 07:57:25 +00:00
Vishwanath Venkatesan
dccfd18481 1. Removing two-phase support functions 
2. Moving nbc headers to a seperate header file and modifying
io_ompio_nbc.c accordingly.

This commit was SVN r26921.
 2012-07-31 04:39:13 +00:00
Vishwanath Venkatesan
539571171b Moving support functions of two-phase to the two_phase component. 
This commit was SVN r26920.
 2012-07-31 04:37:04 +00:00
Edgar Gabriel
fb64322dc3 this code section was supposed to be commented out... 
This commit was SVN r26918.
 2012-07-30 20:46:07 +00:00
Edgar Gabriel
1078f13ad2 set status->_ucount correctly for collective read and write operations in the module 
This commit was SVN r26916.
 2012-07-30 20:14:36 +00:00
Edgar Gabriel
91c8577d9d fix in the offset calculation for explicit offset operations. 
This commit was SVN r26915.
 2012-07-30 20:08:00 +00:00
Ralph Castain
23c2a315a9 Add missing line to set flag indicating at least one port found 
This commit was SVN r26914.
 2012-07-30 17:54:38 +00:00
Edgar Gabriel
81a050add9 simplify the individual fcoll module by just calling the 
mca_io_ompio_file_read/write functions directly. Avoid replicating the code in 
both places.

This commit was SVN r26909.
 2012-07-30 15:44:22 +00:00
Edgar Gabriel
66c5a80dfd - get rid of a warning about an unused variable 
- return MPI_ERR_OTHER instead of MPI_SUCCESS for the functions that are not
  yet implemented 
- add another field to the mca_io_ompio_file_t structure to point back to the
  ompi_file_t structure.

This commit was SVN r26908.
 2012-07-30 15:29:59 +00:00
Ralph Castain
6285f7d8c0 Per request of Shiqing, restore the ccp components 
This commit was SVN r26904.
 2012-07-29 23:49:59 +00:00
Ralph Castain
c7f9a0fa34 Check for recursive use of mpirun - issue error message and abort if detected 
This commit was SVN r26903.
 2012-07-28 21:50:56 +00:00
Ralph Castain
94d11e04fd Add an intermediate state when the VM is ready so that third party tools can take action prior to mapping/launching apps 
This commit was SVN r26902.
 2012-07-28 15:33:09 +00:00
Jeff Squyres
3273e9c658 Added 1.6.1 bullets. 
This commit was SVN r26901.
 2012-07-28 02:21:21 +00:00
Ralph Castain
b2aca614a8 fix typo 
This commit was SVN r26899.
 2012-07-28 01:23:14 +00:00
Jeff Squyres
9f8265eccb The files for automake to generate are specified via AC_CONFIG_FILES 
in the */configure.m4 files.  configure.params files are obsolete.

This commit was SVN r26897.
 2012-07-27 14:33:17 +00:00
Shiqing Fan
660188307c fix an export declaration name 
This commit was SVN r26895.
 2012-07-27 13:26:24 +00:00
Shiqing Fan
f27251ca13 Include the newly added example VS project file into the tarball. 
This commit was SVN r26894.
 2012-07-27 11:53:15 +00:00
Shiqing Fan
42dfbc7d2f Another CMake scripts update for: 
correctly generate hwloc library
automatically define OMPI/OPAL/ORTE_OMPORTS for user applications
update the f77 bindings

This commit was SVN r26893.
 2012-07-27 11:49:09 +00:00
Jeff Squyres
46591b0b1a Clarify a configure warning: we're ''not'' adding to DYLD_LIBRARY_PATH. 
This commit was SVN r26880.
 2012-07-26 21:47:00 +00:00
Jeff Squyres
ce85596bc9 Also show the memcpy framework (if there are any components, which 
there probably won't be, but...).

This commit was SVN r26879.
 2012-07-26 21:28:41 +00:00