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Граф коммитов

1362 Коммитов

Автор SHA1 Сообщение Дата
Sergey Oblomov
38e908f83e PML/UCX: optimization of mprobe call
- refactoring of opal/UCX progress calls

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-08-27 09:50:38 +03:00
Sergey Oblomov
b0f87f2235 PML/UCX: blocked calls optimizations
- added UCX progress priority

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-08-27 09:50:38 +03:00
Jeff Squyres
fe0852bcb4 Miscellaneous compiler warning stomps.
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-08-24 07:39:14 -07:00
Nathan Hjelm
1c84f48640 config: remove OPAL_ENABLE_MULTI_THREADS config macro
We long ago hard-coded this value to 1. This commit cleans it out
entirely.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-23 13:47:02 -06:00
Nathan Hjelm
c294bbc352
Merge pull request #5508 from hjelmn/fuzzy_match
Bring fuzzy matching support into master
2018-08-06 13:52:04 -06:00
Matthew Dosanjh
c8d13486cc Fixed promotion bug
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-06 12:56:36 -06:00
Boris Karasev
57683366ca pmix: added check for pmix fence status
Signed-off-by: Boris Karasev <karasev.b@gmail.com>
2018-08-06 15:01:57 +06:00
Nathan Hjelm
dd74c6252f pml/ob1: custom matching cleanup and configury
This commit updates the new custom matching code in pml/ob1 so it can
not be enabled with a configure option. This commit also renames the
fuzzy-matching headers to avoid potential name conflicts and removes
the use of C reserved identifiers.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-02 13:06:19 -06:00
Matthew Dosanjh
572694b621 Adding custom match source.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-02 12:23:08 -06:00
Sergey Oblomov
d204b8a678 PML/SPML/UCX/COMPONENT: applied C99 initialization
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-28 09:44:03 +03:00
Sergey Oblomov
2806504290 PML/SPML/UCX: init global objects using C99 style
- to avoid value mix used C99 style of object initializations

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-25 14:52:45 +03:00
Sergey Oblomov
6fe0a73861 PML/UCX: fixed ucp request free on persistent request completion
- in sine cases persistent request was deleted during completion
  callback, this cause double free of linked UCX request (assert
  in debug build or hang in release build)
- UCX request is freed prior completion calback

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-20 19:32:20 +03:00
Yossi Itigin
29812494f2
Merge pull request #5402 from hoopoepg/topic/common-del-procs
MCA/COMMON/UCX: del_procs calls are unified to common module
2018-07-19 11:19:45 +03:00
Sergey Oblomov
920cc2e0d9 MCA/COMMON/UCX: del_procs calls are unified to common module
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-18 07:37:25 +03:00
Sergey Oblomov
1c7ae22dfb MCA/COMMON/UCX: shift opal memhooks into common UCX
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-17 13:46:38 +03:00
KAWASHIMA Takahiro
0021616984 pml/ob1: Fix data corruption of MPI_BSEND
Data transferred by `MPI_BSEND` may corrupt if all of the following
conditions are met.

- The message size is less than the eager limit.
- The `btl_alloc` function in the BTL interface returns `NULL`
  for some reason.
- The MPI program overwrites the send buffer after `MPI_BSEND`
  returns.

The problem is in the way of pending a send request in ob1 PML.
The `mca_pml_ob1_send_request_start_copy` function retruns
`OMPI_ERR_OUT_OF_RESOURCE` if `mca_bml_base_alloc` function returns
`des = NULL`. In this case, the send request is added to the
`send_pending` list and `MPI_BSEND` returns immediately. Next time
the `mca_pml_ob1_send_request_start_copy` function tries sending,
the user buffer may have been overwritten by the MPI program.

Call hierarchy of `MPI_BSEND`:

```
  MPI_Bsend
    mca_pml_ob1_send
      if (MCA_PML_BASE_SEND_BUFFERED == sendmode)
        mca_pml_ob1_isend
          MCA_PML_OB1_SEND_REQUEST_START_W_SEQ
            mca_pml_ob1_send_request_start_seq
              mca_pml_ob1_send_request_start_btl
                if (size <= eager_limit)
                  if (req_send_mode == MCA_PML_BASE_SEND_BUFFERED)
                    mca_pml_ob1_send_request_start_copy
                      mca_bml_base_alloc
                        btl_alloc
              if (OMPI_ERR_OUT_OF_RESOURCE == rc)
                add_request_to_send_pending
        ompi_request_free
```

To solve this problem, we should save the data to the buffer
attached by `MPI_BUFFER_ATTACH` before leaving `MPI_BSEND`.

This problem was introduced by ob1 optimization (commits 2b57f422
and a06e491c) in v1.8 series.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-07-12 14:30:58 +09:00
Sergey Oblomov
240670152e MCA/COMMON/UCX: code beautify - alignment
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-06 19:40:58 +03:00
Sergey Oblomov
bef47b792c MCA/COMMON/UCX: unified logging across all UCX modules
- added common logging infrastructure for all
  UCX modules
- all UCX modules are switched to new infra

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-05 16:25:39 +03:00
Sergey Oblomov
8080283b3d MCA/COMMON/UCX: changed return type for wait_request
- for now wait_request returns OMPI status
- updated callers

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-04 23:29:38 +03:00
Sergey Oblomov
c2bd6af9f2 MCA/COMMON/UCX: minor unification of del_proces calls
- some common functionality of del_procs calls is moved into
  mca_common module
- blocking ucp_put call is replaced by non-blocking routine

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-07-02 15:10:53 +03:00
Sergey Oblomov
074f30ba27 PML/UCX: suppressed compilation warning
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-06-27 12:05:07 +03:00
Sergey Oblomov
502d04bf12 UCX/PML/SPML: fixed few coverity issues
- fixed incorrect pointer manipulation/free
- cleaned dead code
- minor optimization on process delete routine
- fixed error handling - free pointers
- added debug output for woker flush failure

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-06-26 18:52:39 +03:00
Yossi Itigin
ee873f4f79
Merge pull request #5322 from hoopoepg/topic/mca-ucx-common
MCA/UCX: added common module
2018-06-26 13:54:12 +03:00
Sergey Oblomov
d57ae62dee MCA/UCX: added common module
- implemented non-blocking routines for flush operations

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-06-22 16:41:09 +03:00
Gilles Gouaillardet
edd02b7144 pml/ucx: silence a warning
declare 'fenced' volatile in order to silence CID 1437465

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-06-22 13:11:42 +09:00
Sergey Oblomov
5f03628560 PML/UCX: removed uneeded flush
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-06-21 12:40:46 +03:00
Sergey Oblomov
2745da7dcc PML/UCX: use non-blocking fence instead of async progress
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-06-21 09:46:03 +03:00
Sergey Oblomov
10f2d831ec PML/UCX: fixed hang on MPI_Finalize
- added async UCX progress thread to allow
  pending requests to complete

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-06-20 16:12:05 +03:00
Yossi Itigin
564f80d362 pml_ucx: add option to use opal memhooks instead of ucx internal hooks
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2018-06-17 15:30:44 +03:00
Thananon Patinyasakdikul
390d72addd
Merge pull request #4885 from davideberius/spc_pr
Initial Software-based Performance Counters PR
2018-06-12 14:04:49 -07:00
David Eberius
d377a6b6f4 Added Software-based Performance Counters driver code along with several counters.
This code is the implementation of Software-base Performance Counters as described in the paper 'Using Software-Base Performance Counters to Expose Low-Level Open MPI Performance Information' in EuroMPI/USA '17 (http://icl.cs.utk.edu/news_pub/submissions/software-performance-counters.pdf).  More practical usage information can be found here: https://github.com/davideberius/ompi/wiki/How-to-Use-Software-Based-Performance-Counters-(SPCs)-in-Open-MPI.

All software events functions are put in macros that become no-ops when SOFTWARE_EVENTS_ENABLE is not defined.  The internal timer units have been changed to cycles to avoid division operations which was a large source of overhead as discussed in the paper.  Added a --with-spc configure option to enable SPCs in the Open MPI build.  This defines SOFTWARE_EVENTS_ENABLE.  Added an MCA parameter, mpi_spc_enable, for turning on specific counters.  Added an MCA parameter, mpi_spc_dump_enabled, for turning on and off dumping SPC counters in MPI_Finalize.  Added an SPC test and example.

Signed-off-by: David Eberius <deberius@vols.utk.edu>
2018-06-11 22:48:16 -04:00
Yossi Itigin
fd12540751
Merge pull request #5227 from hoopoepg/topic/pml-ucx-hang-on-finalize
PML/UCX: fixed hand on MPI_Finalize
2018-06-08 13:19:49 +03:00
Sergey Oblomov
0a8261f3b0 PML/UCX: fixed hand on MPI_Finalize
fixes issue https://github.com/openucx/ucx/issues/2656

added flush for worker object to complete all pending operations

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-06-05 17:22:03 +03:00
Jeff Squyres
35438ae9b5 mpi/finalized: revamp INITIALIZED/FINALIZED
Per MPI-3.1:8.7.1 p361:11-13, it's valid for MPI_FINALIZED to be
invoked during an attribute destruction callback (e.g., during the
destruction of keyvals on MPI_COMM_SELF during the very beginning of
MPI_FINALIZE).  In such cases, MPI_FINALIZED must return "false".

Prior to this commit, we hung in FINALIZED if it were invoked during
a COMM_SELF attribute destruction callback in FINALIZE.  See
https://github.com/open-mpi/ompi/issues/5084.

This commit converts the MPI_INITIALIZED / MPI_FINALIZED
infrastructure to use a single enum (ompi_mpi_state, set atomically)
to represent the state of MPI:

- not initialized
- init started
- init completed
- finalize started
- finalize past COMM_SELF destruction
- finalize completed

The "finalize past COMM_SELF destruction" state is what allows us to
return "false" from MPI_FINALIZED before COMM_SELF has been fully
destroyed / all attribute callbacks have been invoked.

Since this state is checked at nearly every MPI API call (to see if
we're outside of the INIT/FINALIZE epoch), care was taken to use
atomics to *set* the ompi_mpi_state value in ompi_mpi_init() and
ompi_mpi_finalize(), but performance-critical code paths can simply
read the variable without needing to use a slow call to an
opal_atomic_*() function.

Thanks to @AndrewGaspar for reporting the issue.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-06-01 13:36:29 -07:00
Sergey Oblomov
5ec26914a6 PML/UCX: do not set offset on ordered data recv
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-05-21 19:40:07 +03:00
Sergey Oblomov
19607daa32 PML/UCX: create convertor clone instead of stack reset
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-05-17 16:39:13 +03:00
Sergey Oblomov
7c5de01c57 PML/UCX: reset converter stack on unordered messages
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-05-17 13:11:02 +03:00
bosilca
2ab628b92e
Merge pull request #5074 from bosilca/topic/remove_warnings
Remove warnings identified by clang.
2018-05-15 11:15:23 -04:00
Yossi Itigin
385f38ab4e ucx: improve error messages during connection establishment
Also, unite common code calling ucp_ep_create()

Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2018-04-30 15:45:05 +03:00
George Bosilca
6ff11267fb
Remove warnings identified by clang.
Plus minor spacing and indentation issues.

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-04-14 17:14:12 -04:00
Jeff Squyres
c3adcb05eb Miscellaneous compiler warnings fixes
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-03-23 11:45:30 -07:00
Thananon Patinyasakdikul
09cba8b30b pml/ob1: fixed out of sequence bug.
This commit fixes #4795

- Fixed typo that sometimes causes deadlock in change of protocol.
- Redesigned out of sequence ordering and address the overflow case of
  sequence number from uint16_t.

Signed-off-by: Thananon Patinyasakdikul <tpatinya@utk.edu>
2018-02-27 13:49:40 -05:00
Jeff Squyres
e7f91f8068
Merge pull request #4527 from clementFoyer/osc-no-includes
Remove inter-dependencies between OSC modules.
2018-02-09 15:49:56 -05:00
Nathan Hjelm
da9f833f4a pml/ob1: ignore the eager limit of RDMA-only btls
This commit fixes a flaw in the eager limit check in pml/ob1. The
check was incorrectly checking if RDMA-only BTLs (BTLs without the
send flag) has a valid eager limit. This commit fixes the check by
adding an additional check for the send flag on the BTL module.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-02-07 12:42:44 -07:00
Clement Foyer
f5b4fc05f8 Remove inter-dependencies between OSC modules.
The osc monitoring component needed to include other OSC components
header in order to be able tu access communicator through the
component specific ompi_osc_*_module_t structures. This commit remove
the dependency, and resolve the issue #4523.

Extend the common monitoring API.

  * Now it's possible to translate from local rank to world rank from
    both the communicator and the group.
  * Remove useless hashtable as we directly use the w_group contained
    in window structure.

Add automatic generation at config time.

The templates are expanded at configure time. It creates a new header
file that generates all the variables/functions needed. Adding this
during the autogen automagicaly generates for each of the available
modules the proper functions.

Only keep a generated argv-style array.

Following Jeff's advice, the configure.m4 file generate a simple array
of module variables to be iterated over to find the proper module.

Signed-off-by: Clement Foyer <clement.foyer@inria.fr>
2018-02-07 11:52:00 +00:00
Sergey Oblomov
7a5811d0a8 request/state: update state for canceled request
- fixed issue in set state for canceled request

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-01-29 18:26:20 +02:00
Yossi Itigin
f2851fd502
Merge pull request #4724 from alex-mikheev/topic/ucx_as_default
ompi/oshmem: ucx is selected over yalla/ikrit by default
2018-01-17 17:41:49 +02:00
Alex Mikheev
640e945b9c ompi: pml/ucx: blocking send using ucp_tag_send_nbr
Signed-off-by: Alex Mikheev <alexm@mellanox.com>
2018-01-17 15:54:18 +02:00
Alex Mikheev
ae326546f4
ompi/oshmem: ucx is selected over yalla/ikrit by default
Signed-off-by: Alex Mikheev <alexm@mellanox.com>
2018-01-17 15:08:04 +02:00
Alex Mikheev
e7bf0617cf
ompi: pml ucx: improve recv latency
Signed-off-by: Alex Mikheev <alexm@mellanox.com>
2017-12-26 16:24:16 +02:00