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Автор SHA1 Сообщение Дата
Mike Dubman
4e7e7d7c3f print error which is ignored on upper layer 
This commit was SVN r26106.
 2012-03-06 14:25:56 +00:00
George Bosilca
a78a7bd8e8 The tuned collectives can now deal with more than 2Gb of data. 
This commit was SVN r26103.
 2012-03-05 22:23:44 +00:00
George Bosilca
762b3e13a9 Use the correct name for the datatype destruction function. 
This commit was SVN r26100.
 2012-03-05 15:54:53 +00:00
George Bosilca
64a2979dc3 Always return something. 
This commit was SVN r26099.
 2012-03-05 15:54:15 +00:00
George Bosilca
7d523a8852 Avoid calling the bcast with counts larger than INT_MAX. 
This commit was SVN r26098.
 2012-03-05 14:30:30 +00:00
George Bosilca
e8c358c188 Allow Open MPI to deal with size_t internally. 
This commit was SVN r26097.
 2012-03-05 14:10:26 +00:00
George Bosilca
af9b6f6161 Minor beautification. 
This commit was SVN r26095.
 2012-03-05 13:23:54 +00:00
Abhishek Kulkarni
08ca0f80bc Fix a C/R bug where the restart hung due to 
dangling fds in the openib btl.

This commit was SVN r26094.
 2012-03-04 06:57:33 +00:00
George Bosilca
f83670211e Allow the user to define dynamic rules for messages larger than 2GB. 
This commit was SVN r26084.
 2012-03-02 21:16:23 +00:00
George Bosilca
8791ade293 Help he selection of the right algorithm for large data (> 2Gb). Thanks 
to Fujitsu for the patch.

This commit was SVN r26080.
 2012-03-02 19:12:22 +00:00
Terry Dontje
3e70cad203 Correct a few alignment problems to address the issue brought up in ticket #2964 
This commit was SVN r26078.
 2012-03-01 17:29:40 +00:00
Nathan Hjelm
f1525bdbff ob1: fix two fragment leaks 
- MAJOR! get src descriptor leaks if mca_bml_base_send fails
 - minor. descriptor leaked in mca_pml_send_request_start_copy if the btl returns OMPI_ERR_RESOURCE_BUSY.

This commit was SVN r26077.
 2012-03-01 15:53:39 +00:00
Matthias Jurenz
b4523496c8 Changes to VT: Fixed compiler warning about unused variable when compiling on MacOS 
This commit was SVN r26076.
 2012-03-01 12:17:27 +00:00
Mike Dubman
540b3c0c25 update mxm mtl to changes in mxm api 
This commit was SVN r26073.
 2012-02-29 22:02:34 +00:00
Jeff Squyres
97b3603036 A bunch of fixes and improvements to Open MPI's various command line tools. 
* fixed some bugs where "unknown" tokens were allowed on the command
   line (which should really only be used for ortertun).
 * if an unknown token is encountered, print a short error to stderr
   and quit with a nonzero exit status
 * if we don't find the right number of parameters to an option, print
   a short error to stderr and quit with a nonzero exit status
 * when --help is given, print the help message to stdout (not stderr)
   and quit with a zero exit status
 * added --showme:help option to the wrapper compilers
 * updated docs in opal/util/cmd_line.h
 * other small/miscellaneous CLI parsing bugs in various tools

I won't bore you with what we did before.  :-)  Here's some examples
of what the new behavior looks like:

{{{
% ompi_info --bogus
ompi_info: Error: unknown option "--bogus"
Type 'ompi_info --help' for usage.
% ompi_info --param bogus
ompi_info: Error: option "--param" did not have enough parameters (2)
Type 'ompi_info --help' for usage.
%
}}}

This commit was SVN r26072.
 2012-02-29 17:52:38 +00:00
Nathan Hjelm
a7209e309a ugni: opps, sendi was missing from Makefile.am 
This commit was SVN r26067.
 2012-02-28 16:10:35 +00:00
Shiqing Fan
fec1099509 fix two typecasts. 
This commit was SVN r26066.
 2012-02-28 15:28:57 +00:00
Edgar Gabriel
636cf786be local_heap_sort should really be a static function. 
This commit was SVN r26065.
 2012-02-28 14:42:56 +00:00
Matthias Jurenz
9c822b065f Even more changes belonging to r26051 
This commit was SVN r26063.

The following SVN revision numbers were found above:
  r26051 --> open-mpi/ompi@f245ed965a
 2012-02-27 15:53:14 +00:00
Edgar Gabriel
025c14a19a fix to the lustre configure logic. 
This commit was SVN r26057.
 2012-02-27 14:37:26 +00:00
Vishwanath Venkatesan
7c9c3ede61 Modified implementation for the static segmentation read algorithm with improved 
performance and bug fixes.

This commit was SVN r26056.
 2012-02-24 20:55:33 +00:00
Vishwanath Venkatesan
d5a9223a9a Removed a variable which was allocated but never used. 
This commit was SVN r26055.
 2012-02-24 20:48:52 +00:00
Vishwanath Venkatesan
326bc69df4 Modified implementation for static file write all algorithm which fixes all the previous 
bugs and provides improved performance.

This commit was SVN r26054.
 2012-02-24 20:47:09 +00:00
Jeff Squyres
027226ee19 ''Really'' fix Fortran attribute copy callbacks. Put the original 
logic back (that was replaced by r25965 and r26000) and fix the one
place that missed OMPI_LOGICAL_2_INT.  This missing OMPI_LOGICAL_2_INT
was the real problem.

This commit was SVN r26053.

The following SVN revision numbers were found above:
  r25965 --> open-mpi/ompi@b10ebf4b2d
  r26000 --> open-mpi/ompi@90811cb50c
 2012-02-24 16:42:30 +00:00
Matthias Jurenz
b785c9efe9 Missing change belonging to r26051 
This commit was SVN r26052.

The following SVN revision numbers were found above:
  r26051 --> open-mpi/ompi@f245ed965a
 2012-02-24 16:24:22 +00:00
Matthias Jurenz
f245ed965a Changes to OTF: 
- otfmerge-mpi:
		- use the MPI-2 versions of MPI_Address and MPI_Type_struct

Changes to VT:
	- VT libs:
		- suppress warnings about usage of deprecated MPI functions (OMPI_WANT_MPI_INTERFACE_WARNING=0)
	- vtunify-mpi:
		- use the MPI-2 versions of MPI_Address and MPI_Type_struct
		- removed unused MPI wrappers

This commit was SVN r26051.
 2012-02-24 15:48:51 +00:00
Jeff Squyres
11b50156c3 Remove extraneous spaces from the ugni help output. 
This commit was SVN r26047.
 2012-02-24 13:54:19 +00:00
Matthias Jurenz
99a3951c48 Changes to VT: 
- fixed platform detection on BlueGene when configuring for the frontend

This commit was SVN r26042.
 2012-02-24 10:10:50 +00:00
Rolf vandeVaart
b0a84b0a7d New btl that extends sm btl to support GPU transfers within a node. 
Uses new CUDA IPC support.  Also, a few minor changes in PML to take
advantage of it.

This code has no effect unless user asks for it explicitly via 
configure arguments.  Otherwise, it is either #ifdef'ed out or
not compiled.

This commit was SVN r26039.
 2012-02-24 02:13:33 +00:00
Brian Barrett
aff49e98b4 Don't remove mpijavac.1 during distclean 
This commit was SVN r26038.
 2012-02-23 22:57:51 +00:00
Nathan Hjelm
8217c46666 ompi_free_list: allocate payload if payload size > 0 in the fl_mpool = NULL case 
This commit was SVN r26027.
 2012-02-23 16:47:28 +00:00
Nathan Hjelm
9843cd0466 ugni: missed one more merge typo 
This commit was SVN r26026.
 2012-02-23 16:39:15 +00:00
Nathan Hjelm
d7cd95c802 vader: fix typo 
This commit was SVN r26025.
 2012-02-23 16:29:45 +00:00
Nathan Hjelm
c83fe003a0 ugni: fix branch merge typo 
This commit was SVN r26024.
 2012-02-23 16:16:21 +00:00
Matthias Jurenz
3aafb6ed89 Append VampirTrace specific CXXFLAGS (possibly given by --with-contrib-vt-flags) to CXXFLAGS. They could contain flags which are essential for the success of the STL configure test (e.g. -library=stlport4). 
This commit was SVN r26017.
 2012-02-23 12:46:45 +00:00
Matthias Jurenz
e59c5bb7bc Changes to VT: 
- fixed compiler warnings if using non-GNU compiler, respectively if _FORTIFY_SOURCE is 0 or not defined

This commit was SVN r26016.
 2012-02-23 09:05:10 +00:00
Rolf vandeVaart
c7a0ce2755 Two new mpools. They are not used now (and by default, not compiled) 
but they will be soon.  Provide support for GPU buffer transfers within a node.

This commit was SVN r26008.
 2012-02-22 23:32:36 +00:00
Ralph Castain
da5f290cef During this initial deployment, output a more definitive error message when libs cannot load 
This commit was SVN r26005.
 2012-02-22 21:59:31 +00:00
Ralph Castain
9fccc86f6c Only emit the java bindings warning if we actually are building them 
This commit was SVN r26004.
 2012-02-22 21:56:47 +00:00
Nathan Hjelm
dc94b6a3fb vader: minor fast box optimization 
This commit was SVN r26002.
 2012-02-22 20:53:49 +00:00
Jeff Squyres
90811cb50c Some updates based on Craig's review of #3023. Be a little more 
defensive about the check of the flag value for the C-based keyvals.
We would never have had a problem because of the specific input data,
but being defensive is good (and it makes the code a little less
subtle / easier to read).

Also add in more comments about exactly what is going on, since this
is complicated stuff.  :-)

This commit was SVN r26000.
 2012-02-22 20:32:23 +00:00
Nathan Hjelm
4c7b7c675a vader: minor code cleanup. move xpmem_create to component_init 
This commit was SVN r25999.
 2012-02-22 18:32:40 +00:00
Jeff Squyres
d595ec2ef2 Remove the use of all deprecated functions so that we don't induce 
warnings about using deprecated functions in our C++ inline functions.

This commit was SVN r25994.
 2012-02-21 21:52:23 +00:00
Mike Dubman
81bd5eee8d in mxm, use sender_len field and not actual_len when returning result from probe 
This commit was SVN r25993.
 2012-02-21 19:55:16 +00:00
Jeff Squyres
b6a90434e4 Fix some include file header ordering issues for some BSDs, suggested 
by Paul Hargrove.

This commit was SVN r25984.
 2012-02-21 13:32:14 +00:00
Ralph Castain
0ad3f14281 Uninstall the java wrapper compiler 
This commit was SVN r25979.
 2012-02-21 02:54:01 +00:00
Jeff Squyres
5656efe85d Don't distribute these files; they're generated. 
This commit was SVN r25977.
 2012-02-21 00:31:04 +00:00
Ralph Castain
ae1f248a9a Ensure the man page gets into the tarball 
This commit was SVN r25975.
 2012-02-20 23:40:36 +00:00
Jeff Squyres
7fb1144d27 Add missing AC_CONFIG_FILES 
This commit was SVN r25974.
 2012-02-20 22:59:03 +00:00
Ralph Castain
47c64ec837 Roll in Java bindings per telecon discussion. Man pages still under revision 
This commit was SVN r25973.
 2012-02-20 22:12:43 +00:00
Jeff Squyres
a8f409caf9 Enable MPI deprecated API function warnings by default 
This commit was SVN r25969.
 2012-02-20 20:30:43 +00:00
Jeff Squyres
6a109c8e15 Ensure that we have aio.h before trying to compile this component. 
This commit was SVN r25966.
 2012-02-20 15:53:20 +00:00
Jeff Squyres
b10ebf4b2d Wow. This bug has existed for '''YEARS''' (probably ever since Open 
MPI started!).

The FLAG argument to fortran attribute copy functions is a LOGICAL,
meaning that it can only return .TRUE. or .FALSE.  The corresponding C
argument is an int, and the MPI spec says that it must return 1 or 0.
However, in Fortran, .TRUE. is not always necessarily == 1.  So we
need to expand the test to see if it's a Fortran callback.  If so,
check for the Fortran .TRUE. value (not 1).  If it's a C callback,
then check for 1.

This commit was SVN r25965.
 2012-02-20 14:39:15 +00:00
Matthias Jurenz
c888ceaa55 Changes to VT: 
- vtunify[-mpi]:
		- fixed compile error with Clang++ v2.9 and v3.0

This commit was SVN r25962.
 2012-02-20 09:36:09 +00:00
Ralph Castain
534d70025f Cleanup the detection of process binding during mpi_init. There are several cases that need to be checked: 
1. no binding support - indicated by a negative return code from get_cpubind

2. binding supported, but not bound - the bitset returned by get_cpubind is the same as the available cpuset

3. binding supported and bound - bitset from get_cpubind is a subset of available cpuset

4. only one cpu is available - in this case, get_cpubind matches the available cpuset, but we are effectively bound

This commit was SVN r25957.
 2012-02-17 21:18:53 +00:00
Jeff Squyres
108799ea0e Fixes trac:2933: a bunch of C++ API corrections from Fujitsu. Custom 
patch from the ticket, released under the BSD license.

This commit was SVN r25949.

The following Trac tickets were found above:
  Ticket 2933 --> https://svn.open-mpi.org/trac/ompi/ticket/2933
 2012-02-17 11:42:51 +00:00
George Bosilca
bd9402fd8d Fix call to error_cb. 
This commit was SVN r25946.
 2012-02-17 03:18:51 +00:00
Jeff Squyres
4c0d24ff9a Improve the help messages for tcp_btl_if_[in|ex]clude 
This commit was SVN r25940.
 2012-02-16 15:59:18 +00:00
Nathan Hjelm
1ee6d5d21a ugni: fix typos in mca_btl_ugni_put 
This commit was SVN r25937.
 2012-02-15 23:26:03 +00:00
Jeff Squyres
0c6f4fbce5 Only access the status and message if the flag is true. 
This commit was SVN r25936.
 2012-02-15 20:16:51 +00:00
Jeff Squyres
2b1320e065 Oops -- need to "rm -f" to ensure that rm won't error out if nothing 
is removed.

This commit was SVN r25935.
 2012-02-15 20:06:59 +00:00
Jeff Squyres
54cf60eb4b $(RM) is not a standard macro. Just use "rm" -- every platform has it. 
This commit was SVN r25934.
 2012-02-15 19:51:59 +00:00
Jeff Squyres
1cab7579d4 Do not use $(RM); BSD-flavored "make"s don't understand it. Instead, 
just use "rm" -- everyone has that.  Thanks to Paul Hargrove for
identifying the issue.

This commit was SVN r25910.
 2012-02-13 22:13:38 +00:00
Mike Dubman
6ec768f0c6 fix #2971 
This commit was SVN r25908.
 2012-02-12 09:28:42 +00:00
Nathan Hjelm
8c9dc990a9 ugni: fixed typo 
This commit was SVN r25899.
 2012-02-10 01:27:31 +00:00
Nathan Hjelm
994127cb6b ugni: move mca_btl_ugni_smsg_mbox_t back to btl_ugni_endpoint.h 
This commit was SVN r25898.
 2012-02-10 01:11:54 +00:00
Nathan Hjelm
0ccfd3e6db ugni btl update. changes: 
- re-enable sendi
 - move smsg common code into btl_ugni_smsg.h
 - added new parameters for smsg/eager frags
 - use get for frags larger than the smsg_limit
 - bug fixes
 - code cleanup

This commit was SVN r25897.
 2012-02-10 00:47:29 +00:00
Ralph Castain
30ab3b2332 Ensure we don't segfault if comm_spawn_multiple fails as it returns a NULL pointer to the new communicator when that happens. Thanks to Yuki MATSUMOTO of Fujitsu for the patch. 
cmr:v1.6

This commit was SVN r25886.
 2012-02-09 15:59:49 +00:00
Jeff Squyres
990107e494 Must initialize message->m_f_to_c_index to MPI_UNDEFINED, or calling 
MPI_Message_c2f will do Bad Things.

This commit was SVN r25884.
 2012-02-08 22:36:28 +00:00
Mike Dubman
b18a1611c3 - if everything is ok set return value to OMPI_SUCCESS in mtl/mxm 
This commit was SVN r25879.
 2012-02-08 14:19:58 +00:00
Christopher Yeoh
bc26adcc32 Fixes trac:2998 
Adds a lock to protect the sm pending_sends list from concurrent access
Fixes bug where btl_sm_process_pending_sends would return an item to
the free list and then continue to use it for a little while

cmr:v1.6

This commit was SVN r25878.

The following Trac tickets were found above:
  Ticket 2998 --> https://svn.open-mpi.org/trac/ompi/ticket/2998
 2012-02-08 01:32:36 +00:00
Jeff Squyres
982158b513 Add F90 binding for MPI_Comm_split_type 
This commit was SVN r25877.
 2012-02-07 17:40:49 +00:00
Jeff Squyres
f545e4c2b2 Make these scripts be executable 
This commit was SVN r25873.
 2012-02-07 16:27:01 +00:00
Jeff Squyres
631967759f Fix argument type. 
This commit was SVN r25872.
 2012-02-07 15:59:43 +00:00
Jeff Squyres
eb35cae681 Make the new Mprobe and friends functions be compiled in Fortran. 
This commit was SVN r25871.
 2012-02-07 15:58:58 +00:00
Jeff Squyres
092448f19e Doh! Waiting for the test compile to finish ''before'' committing 
reduces the potential for silly typos like this.  :-(

This commit was SVN r25870.
 2012-02-07 15:27:50 +00:00
Jeff Squyres
3c3994ede9 Ensure PMPI_Message_c2f and PMPI_Message_f2c are compiled. 
This commit was SVN r25869.
 2012-02-07 15:22:19 +00:00
Brian Barrett
25d48e22fa Implementation of the MPI-3 Matched Probe functionality. Currently only 
implemented in the OB1 PML, will return NOT_SUPPORTED in other PMLs.

This commit was SVN r25865.
 2012-02-06 17:35:21 +00:00
Jeff Squyres
4eb22530ea Missed this in last night's checkin: without it, Fortran 
MPI_GET_LIBRARY_VERSION will cause compiler breakage on platforms
without weak symbols.

This commit was SVN r25863.
 2012-02-03 15:59:55 +00:00
Jeff Squyres
feb8eb8a90 Add the new MPI-3 function MPI_GET_LIBRARY_VERSION. 
This commit was SVN r25860.
 2012-02-02 23:57:09 +00:00
Jeff Squyres
e7f0d2e091 We've been 2.1 compliant for quite a while now. :-) 
This commit was SVN r25859.
 2012-02-02 22:47:45 +00:00
Mike Dubman
6188ab7317 * ep init refactoring 
* split ep_info into fragments to fit PMI limit

This commit was SVN r25857.
 2012-02-02 15:00:47 +00:00
Vishwanath Venkatesan
15ebe838e9 Modified implementation of two_phase read all similar to the changes for the write all 
incorporating romio style partitioning.

This commit was SVN r25853.
 2012-02-01 18:30:13 +00:00
Vishwanath Venkatesan
158374bdd0 Dynamic file write all algorithm optimized by using derived datatype for receiving actual data 
thereby avoiding the merging step in the fbtl.

This commit was SVN r25852.
 2012-02-01 18:20:44 +00:00
Vishwanath Venkatesan
b9026ccbd0 Fix for two-phase generating flattened datatype using decoded iovec for 
handling non-contiguous memory and contiguous file cases.

This commit was SVN r25850.
 2012-02-01 17:23:51 +00:00
Jeff Squyres
4f35b62154 Components should not be linking to top-level libraries -- and 
definitely should not be linking to more than libmpi.la!  (remember
that libmpi.la now wholly contains libopen-rte.la, which wholly
contains libopen-pal.la).

This commit was SVN r25843.
 2012-01-31 20:43:27 +00:00
Matthias Jurenz
f2362262a9 Pass STL configure test on every valid C++ compiler (see #2982) 
This commit was SVN r25833.
 2012-01-31 15:39:11 +00:00
Matthias Jurenz
10697ec859 Fixed some of Jeff's suggestions to #2982 
This commit was SVN r25817.
 2012-01-30 15:36:01 +00:00
Mike Dubman
92873872f5 revert r25813 
This commit was SVN r25816.

The following SVN revision numbers were found above:
  r25813 --> open-mpi/ompi@8ed781d7e9
 2012-01-30 13:22:38 +00:00
Matthias Jurenz
d154e81668 If configure of a contributed component fails, abort if it's requested via command line switch 
This commit was SVN r25814.
 2012-01-30 12:09:06 +00:00
Mike Dubman
8ed781d7e9 add mca param to enable/disable mxm 
This commit was SVN r25813.
 2012-01-30 11:14:20 +00:00
Mike Dubman
9f0ca9dfc0 fix: extract source from imm request fields instead from depricated api 
This commit was SVN r25812.
 2012-01-30 10:37:37 +00:00
Jeff Squyres
8e31f29f07 Fixes trac:2967: pretty much copy the text from MPI-2.2 in the description 
of the group argument to MPI_COMM_CREATE.

cmr:v1.5:reviewer=jjhursey
cmr:v1.4.5:reviewer=jjhursey

This commit was SVN r25810.

The following Trac tickets were found above:
  Ticket 2967 --> https://svn.open-mpi.org/trac/ompi/ticket/2967
 2012-01-28 12:53:00 +00:00
Ralph Castain
a0edae52f2 Ensure the wrapper flags get entered in the right order, with -lpmi coming before the alps util libs 
This commit was SVN r25809.
 2012-01-27 20:56:21 +00:00
Matthias Jurenz
d2e180ffa0 Added field for VampirTrace support indicating whether it's enabled or not 
This commit was SVN r25805.
 2012-01-27 14:11:33 +00:00
Matthias Jurenz
085e3dc470 Added configure test for suitable C++ STL from Oracle Studio compiler. 
VampirTrace needs the STLport library due to missing standard functionality in the default C++ STL (libCstd).

This commit was SVN r25804.
 2012-01-27 13:11:09 +00:00
Nathan Hjelm
97dad0ac49 ugni: don't release eager fragments until we get local smsg completion 
This commit was SVN r25796.
 2012-01-27 00:32:43 +00:00
Nathan Hjelm
669f0afd14 ugni: poll smsg mailbox until it is empty 
This commit was SVN r25794.
 2012-01-26 20:50:09 +00:00
Nathan Hjelm
2a83297f96 silence vader warnings 
This commit was SVN r25793.
 2012-01-26 20:07:33 +00:00
Mike Dubman
6c954ad43f set mxm to call opal_progress in tight loops 
This commit was SVN r25788.
 2012-01-26 18:33:43 +00:00