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Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
George Bosilca
e361bcb64c Send optimizations.
1. The send path get shorter. The BTL is allowed to return > 0 to specify that the
   descriptor was pushed to the networks, and that the memory attached to it is 
   available again for the upper layer. The MCA_BTL_DES_SEND_ALWAYS_CALLBACK flag
   can be used by the PML to force the BTL to always trigger the callback.
   Unmodified BTL will continue to work as expected, as they will return OMPI_SUCCESS
   which force the PML to have exactly the same behavior as before. Some BTLs have
   been modified: self, sm, tcp, mx.
2. Add send immediate interface to BTL.
   The idea is to have a mechanism of allowing the BTL to take advantage of
   send optimizations such as the ability to deliver data "inline". Some
   network APIs such as Portals allow data to be sent using a "thin" event
   without packing data into a memory descriptor. This interface change
   allows the BTL to use such capabilities and allows for other optimizations
   in the future. All existing BTLs except for Portals and sm have this interface
   set to NULL.

This commit was SVN r18551.
2008-05-30 03:58:39 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Ralph Castain
fa082cafa9 Shift the architecture calculation from the ompi/datatype engine to the opal/util area. This allows us to compute the architecture earlier in the launch and communicate it outside of the modex.
Note: this is an early preliminary step in the movement of portions of the datatype engine to the opal layer.

This commit was SVN r18198.
2008-04-17 20:43:56 +00:00
Shiqing Fan
1c4c7e0f2f Add memchecker support for osc rdma communication.
This commit was SVN r18173.
2008-04-16 13:29:55 +00:00
Tim Prins
b88a3f7a94 Update onesided components to fix the case (on 64 bit machines) where the total offset is greater than 2^31-1 bytes.
See: http://www.open-mpi.org/community/lists/users/2008/01/4880.php

This commit was SVN r17400.
2008-02-07 18:45:35 +00:00
Gleb Natapov
e2e211f23b Add flags parameter to btl_alloc() and btl_prepare_src() functions. If BTL
knows at the time of allocation priority of a descriptor it may do some
optimizations.

This commit was SVN r16901.
2007-12-09 14:08:01 +00:00
Gleb Natapov
04578ffdd6 Change calls to bml_btl->btl_alloc() to mca_bml_base_alloc().
This commit was SVN r16596.
2007-10-28 16:04:17 +00:00
Brian Barrett
7a9a8c7e17 Support reduction operations other than MPI_REPLACE for user-defined
datatypes with MPI_ACCUMULATE

This commit was SVN r15418.
2007-07-13 20:46:12 +00:00
Brian Barrett
739fed9dc9 Don't poke at internal structure fiealds of communicators or groups, but
instead use accessor functions

This commit was SVN r15366.
2007-07-11 17:16:06 +00:00
Brian Barrett
25e52238ab add ability to buffer put/accumulate messages during an epoch
This commit was SVN r15295.
2007-07-05 21:40:06 +00:00
Brian Barrett
74008aac53 Support real RDMA operations for networks that support it
This commit was SVN r15288.
2007-07-05 03:32:32 +00:00
Brian Barrett
8031f6561e Make a bunch of debugging calls use the macro version
This commit was SVN r15170.
2007-06-21 22:24:40 +00:00
Brian Barrett
7e57bbb0ef React slightly better when datatype creation from a buffer fails
This commit was SVN r14806.
2007-05-30 20:32:02 +00:00
Galen Shipman
3401bd2b07 Add optional ordering to the BTL interface.
This is required to tighten up the BTL semantics. Ordering is not guaranteed,
but, if the BTL returns a order tag in a descriptor (other than
MCA_BTL_NO_ORDER) then we may request another descriptor that will obey
ordering w.r.t. to the other descriptor.


This will allow sane behavior for RDMA networks, where local completion of an
RDMA operation on the active side does not imply remote completion on the
passive side. If we send a FIN message after local completion and the FIN is
not ordered w.r.t. the RDMA operation then badness may occur as the passive
side may now try to deregister the memory and the RDMA operation may still be
pending on the passive side. 

Note that this has no impact on networks that don't suffer from this
limitation as the ORDER tag can simply always be specified as
MCA_BTL_NO_ORDER.

This commit was SVN r14768.
2007-05-24 19:51:26 +00:00
Brian Barrett
5ec421e1b0 Create a new queue (to simplify locking) for requests that are started but
can not be started by the BTL.

This commit was SVN r14757.
2007-05-24 17:21:56 +00:00
Brian Barrett
1a9f48c89d Some much needed cleanup of the rdma one-sided component, similar to
r14703 for the point-to-point component.

  * Associate the list of long message requests to poll with the 
    component, not the individual modules
  * add progress thread that sits on the OMPI request structure
    and wakes up at the appropriate time to poll the message
    list to move long messages asynchronously.
  * Instead of calling opal_progress() all over the place, move
    to using the condition variables like the rest of the project.
    Has the advantage of moving it slightly further along in the
    becoming thread safe thing.
  * Fix a problem with the passive side of unlock where it could 
    go recursive and cause all kinds of problems, especially 
    when progress threads are used. Instead, have two parts of 
    passive unlock -- one to start the unlock, and another to 
    complete the lock and send the ack back. The data moving 
    code trips the second at the right time. 

This commit was SVN r14751.

The following SVN revision numbers were found above:
  r14703 --> open-mpi/ompi@2b4b754925
2007-05-24 15:41:24 +00:00
Brian Barrett
48ec0b2071 Revert out r12974, 12976, and 12991 as George has provided a less intrusive fix
for now...

This commit was SVN r12997.

The following SVN revision numbers were found above:
  r12974 --> open-mpi/ompi@27cea44a9c
2007-01-04 22:07:37 +00:00
Brian Barrett
27cea44a9c Fix a number of issues with the ompi_ptr_t:
* Make sure that the pval always writes to the correct portion of the
    lval.  This only matters on 32 bit big endian machines.
  * On 32 bit machines when assigning to pval, the other 4 bytes of lval
    weren't being written, which could lead to bogus data

We use macros so that there aren't casts all over the code and the pval
assignment can occur to the correct 4 bytes.  Refs trac:587

This commit was SVN r12974.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-03 19:47:48 +00:00
Brian Barrett
0c25f7be09 More One-sided fixes:
* Fix a counter roll-over issue that could result from a large (but
    not excessive) number of outstanding put/get/accumulate calls
    during a single synchronization issues (Refs trac:506)
  * Fix epoch issue with rdma component that would effect PWSC
    synchronization (Refs trac:507)

This commit was SVN r12673.

The following Trac tickets were found above:
  Ticket 506 --> https://svn.open-mpi.org/trac/ompi/ticket/506
  Ticket 507 --> https://svn.open-mpi.org/trac/ompi/ticket/507
2006-11-27 21:41:29 +00:00
George Bosilca
126a68dc9a Big datatype commit. Remove all unused features of the datatype engine. As the memory
allocation logic is completely done outside the data-type engine (in the PML) there is
no need for any special case inside the data-type engine. There is less arguments for
the ompi_convertor_pack and ompi_convertor_unpack as well (the last field free_after is
not required anymore as there is no memory allocated in the engine itself). This change
affect all components using datatypes. I test most of them, but it might happens that I
miss some ... If it's the case please let me know (don't shoot the pianist!!).

This commit was SVN r12331.
2006-10-26 23:11:26 +00:00
George Bosilca
8852c00c36 Look like a big commit but in fact it address only one issue. The way we're working with
size and diplacement of data-type. After this patch all data can contain size_t bytes
and the displacements are defined as ptrdiff_t. All of the files I was able to compile
have been modified to match this requirement.

This commit was SVN r12146.
2006-10-17 20:20:58 +00:00
George Bosilca
688a16ea78 A long time waiting patch. Get rid of the comm->c_pml_procs. It was (and that was
long ago) supposed to be used as a cache for accessing the PML procs. But in
all of the PMLs the PML proc contain only one field i.e. a pointer to the ompi_proc.
This pointer can be accessed using the c_remote_group easily. Therefore, there is no
meaning of keeping the PML procs around. Slim fast commit ...

This commit was SVN r11730.
2006-09-20 22:14:46 +00:00
George Bosilca
3f0a7cad9e The last patch for Windows support. Mostly casting and conversion to C++ friendly headers.
This commit was SVN r11400.
2006-08-24 16:38:08 +00:00
Brian Barrett
df84dbad00 * use the osc base debugging stream for all output, and do the whole
verbose MCA param thing instead of changing -1 to 0 and back in the
  output stream param.

This commit was SVN r11245.
2006-08-17 14:52:20 +00:00
Brian Barrett
0ba0a60ada * Merge in new version of the pt2pt one-sided communication component,
implemented entirely on top of the PML.  This allows us to have a
  one-sided interface even when we are using the CM PML and MTLs for
  point-to-point transport (and therefore not using the BML/BTLs)
* Old pt2pt component was renamed "rdma", as it will soon be having
  real RDMA support added to it.

Work was done in a temporary branch.  Commit is the result of the
merge command:

  svn merge -r10862:11099 https://svn.open-mpi.org/svn/ompi/tmp/bwb-osc-pt2pt

This commit was SVN r11100.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r10862
  r11099
2006-08-03 00:10:19 +00:00
Brian Barrett
28b99299b2 * add new component (RDMA) for RDMA one-sided communication
This commit was SVN r10861.
2006-07-17 22:08:55 +00:00