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Brian Barrett
936fdd2ae1 remove some code that accidently came in with r12974. Refs trac:587
This commit was SVN r12991.

The following SVN revision numbers were found above:
  r12974 --> open-mpi/ompi@27cea44a9c

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-04 20:17:07 +00:00
Ralph Castain
3ce9b2f6cc Remove some debugging output that mistakenly was left behind.
This commit was SVN r12984.
2007-01-04 17:24:11 +00:00
Galen Shipman
931a389c4f fix deadlock on rendezvous protocol..
This commit was SVN r12982.
2007-01-04 03:46:11 +00:00
Galen Shipman
f12bbe0591 Handle different subnets correctly and multiple nic endpoint negotiation
This is somewhat limited currently for expample,  if you have 3 ports on Node A and 5 ports
on Node B then the peers will use 3 ports to communicate with each other. 
This is on a subnet basis, so for any pair of nodes we take the
intersection of the available ports within a subnet.

We use subnets to determine reachability for lazy connection establishment. So
if Node A and Node B each have two HCA's (on seperate networks) then the
subnet's must be distinct, otherwise we will try to wire up HCA's on seperate
networks.  

This commit was SVN r12978.
2007-01-03 22:35:41 +00:00
Brian Barrett
7cac26d240 * fix some typos that slipped in with r12974. Refs trac:587
This commit was SVN r12976.

The following SVN revision numbers were found above:
  r12974 --> open-mpi/ompi@27cea44a9c

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-03 20:14:45 +00:00
George Bosilca
1be60e802f Add the DECLSPEC.
This commit was SVN r12975.
2007-01-03 19:59:18 +00:00
Brian Barrett
27cea44a9c Fix a number of issues with the ompi_ptr_t:
* Make sure that the pval always writes to the correct portion of the
    lval.  This only matters on 32 bit big endian machines.
  * On 32 bit machines when assigning to pval, the other 4 bytes of lval
    weren't being written, which could lead to bogus data

We use macros so that there aren't casts all over the code and the pval
assignment can occur to the correct 4 bytes.  Refs trac:587

This commit was SVN r12974.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2007-01-03 19:47:48 +00:00
Rolf vandeVaart
4df8750d74 Add one more helper dTrace script. This script will count the
number of times MPI APIs are called.

This commit was SVN r12972.
2007-01-03 16:35:24 +00:00
Gleb Natapov
a6127fd8ce Increase req_bytes_delivered atomically.
This commit was SVN r12971.
2007-01-03 15:19:34 +00:00
Gleb Natapov
79202561f6 Don't check req_pipeline_depth on frag completion. Checking of
req_bytes_delivered should be enough.

This commit was SVN r12967.
2007-01-03 14:44:20 +00:00
Rolf vandeVaart
5976b59c59 Update comments per a review by Jeff Squyres. Make the
comments about Sun's make requirements more explicit.

This commit was SVN r12966.
2007-01-03 14:39:23 +00:00
Gleb Natapov
1ad6c41735 Sender can start scheduling send fragments immediately after receiving ACK. No
need to wait for RNDV completion.

This commit was SVN r12965.
2007-01-03 12:37:11 +00:00
Rich Graham
8a9da02063 change code to conform with coding standard.
Handle error condition where shared memory file is not created.

This commit was SVN r12964.
2007-01-03 00:06:02 +00:00
Donald Kerr
899297c8f4 udapl btl was not compiling after r12878 on 12/17/2006, some minor changes to allow btl to compile
This commit was SVN r12963.

The following SVN revision numbers were found above:
  r12878 --> open-mpi/ompi@190e7a27cd
2007-01-02 21:44:12 +00:00
Ralph Castain
e5f90eaadc Repair an abstraction violation - OPAL components should refer to OPAL version numbers, not OMPI version numbers.
This now allows OPAL to be built separately.

This commit was SVN r12955.
2007-01-02 16:17:47 +00:00
Ralph Castain
6101050ea6 Remove an abstraction barrier I thought was gone long-ago. The OOB subscription really shouldn't be defined as an OMPI subscription.
I know it's just a technicality, but it is time to address such things rather than just letting them continue to propagate. :-)

This commit was SVN r12954.
2007-01-02 16:16:50 +00:00
Jeff Squyres
ea2d49e55d Because of r12712, we actually need to allocate one ''more'' item than
the value of __n holds.  This is not a problem in the first case
because sizeof(int) == sizeof(MPI_Flogical), so no alloc is actually
performed (which is most compilers, and why we haven't been bitten by
this yet).  But the second case -- where sizeof(int) !=
sizeof(MPI_Flogical) -- is definitely a problem and needs the "+1" in
the alloc, or Bad Things will happen.

This commit was SVN r12953.

The following SVN revision numbers were found above:
  r12712 --> open-mpi/ompi@3e11c76d4c
2007-01-02 16:16:29 +00:00
Ralph Castain
90f5e3fad8 Fix a buglet in the singleton startup procedure. For purposes of minimizing the xcast message, we "strip" the descriptive info on all subscription messages. This means, though, that we have to store the process name and other info so it can be retrieved in the body of the subscription data (as opposed to in the description). This wasn't being done for singletons because they don't call the RMAPS to "map" themselves.
This has now been corrected. The singleton startup will dutifully call the mapper framework so that the proper data storage locations get initialized. Unfortunately, we then had to instruct the RMAPS not to allocate a vpid range for this job - otherwise, it would make a mistake and think there were two processes in it. Hence, a change was required to RMAPS to tell it "map this job, but don't allocate a vpid range for it".

This change will need to migrate across to 1.2 after it "soaks" the appropriate time.

This commit was SVN r12952.
2007-01-02 16:14:44 +00:00
George Bosilca
3cde822d98 Add missing headers.
This commit was SVN r12951.
2007-01-02 08:04:34 +00:00
George Bosilca
d8dee3a740 If the MX driver was unable to load correctly, or if the endpoint was not
created then don't try to call the MX endpoint close function.

This commit was SVN r12950.
2007-01-02 00:01:50 +00:00
Rich Graham
6cb2377015 Change the allocation of the shared memory backing file. The file
is allocated on a per comm_world instance, with the lowest rank
in comm_world on the given host creating and initializing the file,
and then notifying the remaining files via the OOB.

Reviewed: Ralph Castain, Brian Barrett
Addressing ticket #674.

This commit was SVN r12949.
2007-01-01 02:39:02 +00:00
Brian Barrett
b5057d923e fix compile error that crept in with orte changes. This just makes it
compile -- I can't check for correctness on this platform.  Someone
probably wants to do that.

This commit was SVN r12948.
2006-12-31 20:16:20 +00:00
George Bosilca
e223b27268 A fragment is marked completed by the PML when the peer signal the
completion of the RDMA operation associated with the fragment. The
PML will call the BML free which in turn will call the BTL free. The MX 
BTL will not release the fragment if it not tagged with 0xff.

This commit was SVN r12947.
2006-12-31 03:17:47 +00:00
Brian Barrett
2951586b43 Fix type casting issue with MPI_ERRCODES_IGNORE that would cause
errors when using a C++ compiler.  

This commit was SVN r12946.
2006-12-31 02:51:13 +00:00
Brian Barrett
1ba97181dc A number of MPI-2 compliance fixes for the C++ bindings:
* Added Create_errhandler for MPI::File
  * Make errors_throw_exceptions a first-class predefined exception
    handler, and make it work for Comm, File, and Win
  * Deal with error handlers and attributes for Files, Types, and Wins
    like we do with Comms - can't just cast the callbacks from C++
    signatures to C signatures.  Callbacks will then fire with the
    C object, not the C++ object.  That's bad.

Refs trac:455

This commit was SVN r12945.

The following Trac tickets were found above:
  Ticket 455 --> https://svn.open-mpi.org/trac/ompi/ticket/455
2006-12-30 23:41:42 +00:00
George Bosilca
47601e315e Allow the MX BTL to select at runtime if the unexpected handler will
be activated or not.

This commit was SVN r12944.
2006-12-30 20:57:50 +00:00
Brian Barrett
4e157380bf Heterogeneous support changes:
* Add line about heterogeneous support to ompi_info output
  * Print warning and abort if heterogeneous detected and 
    no heterogeneous support available.

Refs trac:587

This commit was SVN r12943.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2006-12-30 17:13:18 +00:00
Brian Barrett
99c0a29602 Disable CM and DR PMLs in heterogeneous situtations as neither are
heterogeneous safe.

Refs trac:587

This commit was SVN r12942.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2006-12-30 16:17:56 +00:00
George Bosilca
d401a65975 Minor cleanups. Don't set the fields that will never be used.
This commit was SVN r12941.
2006-12-29 07:55:17 +00:00
George Bosilca
0b5d879a63 ompi_convertor_pack do not return errors (all checkings are done when the
convertor is created).

This commit was SVN r12940.
2006-12-29 07:40:02 +00:00
George Bosilca
d8db9e49f3 Set the bml_btl to NULL or segfault !!!
This commit was SVN r12939.
2006-12-29 07:38:24 +00:00
Brian Barrett
c010119667 If a BTL isn't needed due to exclusivity ranking, need to call a matching
inuse decrement for the increment that was at the start of the procs loop.
Otherwise, the inuse count can end up higher than it actually is and a btl
can end up in the progress loop when it isn't active to any peer.

Refs trac:543

This commit was SVN r12938.

The following Trac tickets were found above:
  Ticket 543 --> https://svn.open-mpi.org/trac/ompi/ticket/543
2006-12-29 02:22:40 +00:00
George Bosilca
416e5b5f6a Enable the MX extensions if and only if the mx_extensions.h header
is installed on the system.

This commit was SVN r12937.
2006-12-29 00:31:32 +00:00
George Bosilca
d7bc180a90 The max allocated tag is not 16. Use the define instead.
This commit was SVN r12936.
2006-12-28 22:48:58 +00:00
George Bosilca
3eeecc3838 Add support for faster small messages. While sending a message, we check if
the data was buffered by the MX library. If it's the case then we declare
the send as completed and disable the completion event for the mx request.

This commit was SVN r12935.
2006-12-28 22:34:24 +00:00
Brian Barrett
f5b14ff302 Add some missing ignore files
This commit was SVN r12933.
2006-12-28 20:31:36 +00:00
Brian Barrett
f191a042f6 Fix compile errors in heterogeneous code when not building heterogeneous
support.

Refs trac:701

This commit was SVN r12932.

The following Trac tickets were found above:
  Ticket 701 --> https://svn.open-mpi.org/trac/ompi/ticket/701
2006-12-28 20:28:14 +00:00
George Bosilca
b996c00d1a Set the limits for the MX fragments to 4K. Add code to dump the state of the MX
hardware (not activated).

This commit was SVN r12931.
2006-12-28 08:40:37 +00:00
George Bosilca
3903009b8b Add a check for the unexpected handler. If enabled, allow the zero-copy
protocol over the MX BTL. Now, we have only one matching, the one in Open
MPI.

The problem is that when the unexpected handler is triggered, not all the
message is on the host memory. In the best case we get one MX fragment (internal
MX fragment), in the worst we get NULL. The only way to fit this with the
design of the PML is to force the eager protocol at the MX internal fragment
size, and to limit the send/receive protocol at the same size. Tests show
the outcome is not far from optimal (if the pipeline depth is increased
a little bit).

Set MX_PIPELINE_LOG in order to allow MX to use internal fragments of 4K.

This commit was SVN r12930.
2006-12-28 03:35:41 +00:00
George Bosilca
ff2319dcb7 Complete the OUT protocol. Small latency improvements. Some minor cleanups.
Create some macros, reorder some functions. Make sure all fragments are
correctly released at the end.

This commit was SVN r12926.
2006-12-26 18:15:24 +00:00
George Bosilca
75a35ed7ee Implement the PUT protocol over MX. The send/receive approach give the best
performance on a 2G Myrinet card, as it look like pipelining the messages
by 1M is faster than a simple send/receive. However, when using a 10G card
the send/receive will limit the maximum bandwidth to 2.5Gbs. The reason is
the scarce bus resources that have to be shared between the Myrinet hardware
and the memcpy operation. The PUT protocol remove the memcpy, we now have a 
true zero-copy mechanism. But, there is no pipelining yet as it look like the
RDMA pipeline somehow disappeared from the OB1 PML ...

This commit was SVN r12925.
2006-12-24 22:52:46 +00:00
George Bosilca
e8bd985870 Add more output when calls to the MX library fails.
Move the connection status from theproc into the endpoint.

This commit was SVN r12924.
2006-12-24 22:34:48 +00:00
George Bosilca
14dc72f595 Allow the user to change the MX flags.
This commit was SVN r12923.
2006-12-24 22:21:00 +00:00
George Bosilca
dbe2798638 Allow MX to handle shared memory and self communications. By default these features
are disabled (btl_mx_shared_mem respectively btl_mx_self have to be set in order
to activate them).

This commit was SVN r12922.
2006-12-24 22:18:41 +00:00
Brian Barrett
287b5ee27c Add news item about MX BTL fix
This commit was SVN r12921.
2006-12-23 05:23:56 +00:00
Jelena Pjesivac-Grbovic
3494e1bb05 - Updated decision function for Alltoall collective.
Fixes "jump" for intermediate sizes message on 24+ number of nodes
    (at least on Grig cluster).

This commit was SVN r12920.
2006-12-22 19:59:17 +00:00
George Bosilca
b1725e02d4 No more warnings plus some code reordering.
This commit was SVN r12919.
2006-12-21 22:42:15 +00:00
Edgar Gabriel
dc532577db Adding more accurate checking of the input parameters for the
add_error_class and add_error_code files. Also fixed the update of the
lastusedcode attribute, all of work according to my tests pretty fine.

Please note: the testcode attached to the bug 683 still reports some bugs. I
am however pretty sure that the testcode is wrong at that points:
 - the standard says that the attribute MPI_LASTUSEDCODE has to be updated for
 a new error_class or a new error_code. The test currently assumes, that only
 the add_error_code call changes the attribute value.
 - you have to comment out the two lines 73 and 74 in order to make the
 test finish, since these lines check for the error string of non-existent
 codes.
- line 126 the error-string of MPI_ERR_ARG is not "invalid argument" but a
little bit more, so the test thinks the output is wrong. So probably the test
has to be update to match the according error string of MPI_ERR_ARG.

Fixes trac:682

This commit was SVN r12913.

The following Trac tickets were found above:
  Ticket 682 --> https://svn.open-mpi.org/trac/ompi/ticket/682
2006-12-21 19:36:31 +00:00
Jelena Pjesivac-Grbovic
f1aec23507 Adding tuned allgather implementation.
It contains four algorithms: 
Bruck (ciel(logP) steps), Recursive Doubling (log(P) for power-of-2 processes), Ring (P-1 steps),
and Neighbor Exchange (P/2 steps for even number of processes).

All algorithms passed occ, IMB-2.3, and intel verification tests from ompi-tests/ for up to 56 processes.
The fixed decision function is based on results collected over MX on the Grig cluster at 
the University of Tennessee at Knoxville.  
I have also added (and commented out) copy of MPICH2 decision function for allgather
(from their IJHPCA 2005 paper).

This commit was SVN r12910.
2006-12-21 18:40:02 +00:00
Brian Barrett
7880353fcc Need to close every endpoint we open, or the MX progress thread doesn't die,
which can cause segfaults on shutdown.  Calling mx_finalize() isn't enough
to shutdown the thread, so must close endpoints as well.

Refs trac:513

This commit was SVN r12908.

The following Trac tickets were found above:
  Ticket 513 --> https://svn.open-mpi.org/trac/ompi/ticket/513
2006-12-21 18:13:22 +00:00