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Граф коммитов

1535 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
26705efad0 opal_check_alps: fix configure output
There was a path where OPAL_CHECK_ALPS would exit its testing but
still leave `opal_check_cray_alps_happy` blank.  Fix that by setting
it to "no".

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-10-18 11:30:00 -07:00
Michael Heinz
0348d14ff3 PSM MTL is obsolete and should be removed
The PSM MTL for Intel's TrueScale Infiniband HCAs is not being actively
maintained and should be removed from the master branch.

Fixes issue: #6877

Signed-off-by: Michael Heinz <michael.william.heinz@intel.com:
2019-08-07 11:43:03 -04:00
Sergey Oblomov
43186e494b UCX: added PPN hint for UCX context
- added PPN hint for UCX context init

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2019-08-05 18:07:06 +03:00
Geoffrey Paulsen
76dfaceedc Revert "configury: Remove --enable-mpi1-compatibility"
This reverts commit 6f904aff2c.

Signed-off-by: Geoffrey Paulsen <gpaulsen@us.ibm.com>
2019-06-14 13:22:21 -05:00
Geoffrey Paulsen
ed9a670074 Revert "mpi.h.in: delete removed MPI1 functions/datatypes (API change!)"
This reverts commit a6d6be2853.

Signed-off-by: Geoffrey Paulsen <gpaulsen@us.ibm.com>
2019-06-14 13:22:21 -05:00
Gilles Gouaillardet
e70780b762 configury: allow mpi extensions with no libraries
Do not require an archive when the OMPI_MPIEXT_<ext>_HAVE_OBJECT
macro is defined to 0.
See `ompi/mpiext/example/configure.m4`.

Allow some extensions to be built on OS X since the creation of
archives with no files is not permitted.

Refs. open-mpi/ompi#6205

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-04-18 13:42:01 -04:00
Jeff Squyres
73071208c0 opal_summary.m4: make message consistent with others
Fix one message in opal_summary.m4 be consistent with other messages
in the same area of opal_summary.m4.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-04-16 12:20:13 -04:00
James Clark
20f5840cbb Add a compilation flag that adds unwind info to all files that are present in the stack starting from MPI_Init.
This is so when a debugger attaches using MPIR, it can step out of this stack back into main.
This cannot be done with certain aggressive optimisations and missing debug information.

Signed-off-by: James Clark <james.clark@arm.com>
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>

Co-authored-by: Jeff Squyres <jsquyres@cisco.com>
2019-03-27 14:32:15 +00:00
Yossi Itigin
9b91cf09cc
Merge pull request #6481 from hoopoepg/topic/check-ucx-params
PML/SPML/UCX: added evaluation of mmap events
2019-03-14 11:53:42 +02:00
Sergey Oblomov
d8e3562bae PML/SPML/UCX: added evaluation of mmap events
- there was a set of UCX related issues reported which caused
  by mmap API hooks conflicts. We added diagnostic of such
  problems to simplify bug-resolving pipeline

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2019-03-12 21:14:27 +02:00
Jeff Squyres
6f904aff2c configury: Remove --enable-mpi1-compatibility
This configure CLI option should probably have been removed as part of
a6d6be2853.  Regardless, the #defines it
sets no longer exist in the code base at all, so they should be
removed.  Also remove the text about it in README.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-03-11 11:06:07 -07:00
Ralph Castain
8fd6107987
Merge pull request #6418 from rhc54/topic/slurm
Update slurm pmi configury to account for pmix
2019-02-27 14:30:45 -08:00
Geoffrey Paulsen
a6d6be2853 mpi.h.in: delete removed MPI1 functions/datatypes (API change!)
This commit DELETES the removed MPI1 functions and datatypes from
both the mpi.h header and from the library (they were deleted from the
MPI standard in MPI-3.0).

WARNING: This changes the MPI API in a non-backwards compatible way.
         This also removes the configure option that was added in Open
         MPI v4.0.x, requiring users to change their apps if they are
         using any of these almost 20 year old APIs.

This commit removes the following MPI1 removed functions and datatypes:

         MPI_Address
         MPI_Errhandler_create
         MPI_Errhandler_get
         MPI_Errhandler_set
         MPI_Type_extent
         MPI_Type_hindexed
         MPI_Type_hvector
         MPI_Type_struct
         MPI_Type_UB
         MPI_Type_LB

Signed-off-by: Geoffrey Paulsen <gpaulsen@us.ibm.com>
2019-02-27 08:24:11 -08:00
Ralph Castain
c054d4d1cc Ensure we push/pop local AC vars in the right place
Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-02-21 13:28:10 -08:00
Ralph Castain
cd1b5641be Update slurm pmi configury to account for pmix
When Slurm is built against PMIx, some installations place a copy of the
PMIx library that Slurm is linking against in the Slurm PMI location.
Current configury ignores that location. The desired behavior is to look
for a PMIx lib in that location when --with-pmi is given. If the user
also specifies --with-pmix and gives a different location, then override
anything previously found and look for it where the user directed.

Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-02-21 11:33:35 -08:00
Ralph Castain
2f15379171 Remove stale singularity/schizo component
Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-02-20 17:38:24 -08:00
KAWASHIMA Takahiro
1b0fa56261 config: Remove remaining HAVE_LONG_LONG
In the commit cacd6f389c, I removed `#if HAVE_[TYPE]` lines for types
which are always available in C99 compilers. But I forgot to remove
this line. The `HAVE_LONG_LONG` macro is still defined in `confdefs.h`.
So this is not a bug but code cleanup.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-02-18 11:54:53 +09:00
Mikhail Brinskii
751d88192d PML/UCX: Use net worker address for remote peers
For remote node peers pack smaller worker address, which contains
network device addresses only. This would reduce amount of OOB traffic
during startup.

Signed-off-by: Mikhail Brinskii <mikhailb@mellanox.com>
2019-02-14 18:06:36 +02:00
KAWASHIMA Takahiro
8bbd201029
Merge pull request #6205 from kawashima-fj/pr/fp16
Add FP16 datatypes
2019-02-08 14:52:13 +09:00
Jeff Squyres
f5e1a672cc ofi: revamp OPAL_CHECK_OFI configury
Update the OPAL_CHECK_OFI configury macro:

- Make it safe to call the macro multiple times:
  - The checks only execute the first time it is invoked
  - Subsequent invocations, it just emits a friendly "checking..."
    message so that configure output is sensible/logical
- With the goal of ultimately removing opal/mca/common/ofi, rename the
  output variables from OPAL_CHECK_OFI to be
  opal_ofi_{happy|CPPFLAGS|LDFLAGS|LIBS}.
- Update btl/ofi, btl/usnic, and mtl/ofi for these new conventions.
- Also, don't use AC_REQUIRE to invoke OPAL_CHECK_OFI because that
  causes the macro to be invoked at a fairly random time, which makes
  configure stdout confusing / hard to grok.
- Remove a little left-over kruft in OPAL_CHECK_OFI, too (which
  resulted in an indenting change, making the change to
  opal_check_ofi.m4 look larger than it really is).

Thanks Alastair McKinstry for the report and initial fix.
Thanks Rashika Kheria for the reminder.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-02-07 06:29:58 -08:00
Jeff Squyres
59c8ab6da4 m4: remove all configury related to libibverbs
Now that all components that use libibverbs are gone, remove
OPAL_CHECK_VERBS and the confusingly-named OPAL_CHECK_OPENFABRICS
(which really just checked for verbs things -- not all the possible
OpenFabrics APIs/libraries).

The only code left in Open MPI that calls verbs is hwloc -- and that's
just the APIs that takes an IBV device and returns topological
information about it.  Since nothing in the Open MPI code base uses
the "ibv_*" API any more, we have no need for this hwloc functionality
so we'll even remove the --with-verbs configure options.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-02-07 05:36:06 -08:00
KAWASHIMA Takahiro
4d7bde27fb ompi/datatype: Use short float for MPI_REAL2
... and add `MPI_COMPLEX4`.

This commit changes values of existing `OMPI_DATATYPE_MPI_*` macros.
This change does not affect ABI compatibility of `libmpi.so` and the
like because these values are only used in OMPI internal code.

On the other hand, `ompi_datatype_t::id` values of existing datatypes
are not changed and 73 is newly assigned to for `MPI_COMPLEX4` to
retain ABI compatibility.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-02-01 13:01:10 +09:00
KAWASHIMA Takahiro
2ad1c09848 opal/datatype: Add opal_short_float_t
The type `short float`, which is proposed in ISO/IEC JTC 1/SC 22 WG 14
(C WG), is not supported by most compilers yet. But some compilers
(including gcc 7 for AArch64 and clang 6) support `_Float16`, which
is defined in ISO/IEC TS 18661-3:2015 (ISO/IEC JTC 1/SC 22/WG 14 N1945)
as an extensions for C. If it is detected in `configure`, it is used
as an alternate type of `short float` in Open MPI internal code.

This commit adds a `configure` option `--enable-alt-short-float=TYPE`.
It can be used to specify a type other than `short float` and `_Float16`
as the alternate type.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-02-01 12:40:14 +09:00
KAWASHIMA Takahiro
352b667323
Merge pull request #6210 from kawashima-fj/pr/mpiext-use-mod
Use mpi_f08 module in mpi_f08_ext module
2019-01-21 11:56:41 +09:00
Yossi Itigin
387b2ff56f
Merge pull request #6260 from hoopoepg/topic/removed-fca
COLL: removed FCA component
2019-01-17 00:05:07 +08:00
KAWASHIMA Takahiro
b380dd58b5 config/ompi_ext: use mpi module in mpi_ext module
If MPI extensions are enabled, all
`ompi/mpiext/pcollreq/use-mpi/mpiext_*_usempi.h` are included in
`ompi/mpi/fortran/mpiext-use-mpi/mpi-ext-module.F90` and all
`ompi/mpiext/pcollreq/use-mpi/mpiext_*_usempif08.h` are included in
`ompi/mpi/fortran/mpiext-use-mpi-f08/mpi-f08-ext-module.F90` using
`#include` directives.

In `mpiext_*_usempi.h` and `mpiext_*_usempif08.h`, some MPI extension
may want to use constants or handles defined in the `mpi` module and
the `mpi_f08` module. For example, if you want to define a new
datatype in `mpi_f08_ext`, you'll need the definition of
`type(mpi_datatype)`. However, putting `use mpi_f08` line in thier
`mpiext_*_usempif08.h` may cause a compilation error if more than
one MPI extensions are enabled because the `use` statement must be
put prior to any variable declarations.

To resolve this problem, this commit puts `use mpi` and `use mpi_f08`
as first lines of `mpi-ext-module.F90` and `mpi-f08-ext-module.F90`
respectively.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-01-16 11:55:55 +09:00
KAWASHIMA Takahiro
2220623f34 config/ompi_ext: Don't include mpiext_*_mpifh.h in mpi_f08_ext
Including `mpiext_*_mpifh.h` in the source file of the `mpi_f08_ext`
module is not always appropriate. For example, if you want to define
a new datatype in an MPI extension, the `include 'mpif-ext.h'` binding
defines the datatype as `integer` but the `use mpi_f08_ext` binding
defines it as `type(mpi_datatype)`. They conflict.

This commit allows each MPI extension to declare whether it wants to
include its `mpiext_*_mpifh.h` in `mpi_f08` and `mpi_f08_ext`
respectively. The default (no declaration) is 'want'.

See `ompi/mpiext/example/configure.m4` for an example.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-01-16 11:55:55 +09:00
Gilles Gouaillardet
d1fadebc65 configury: enhance C11 detection
clang 5.0 on trusty is busted with respect to C11 atomics

This can be evidenced with the simple program below.
This test was added into OPAL_PROG_CC_C11_HELPER() and disable
C11 atomics if it fails.

_Atomic uint32_t a;
uint32_t b;
atomic_fetch_xor_explicit(&a, b, memory_order_relaxed);

Refs. open-mpi/ompi#6264

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-01-13 13:03:25 +09:00
Sergey Oblomov
0759bb8561 COLL: removed FCA component
- removed FCA collectives from coll/scoll

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2019-01-09 16:51:40 +02:00
KAWASHIMA Takahiro
604dc9744b ompi_ext.m4: Allow generated MPI-ext Fortran headers
Allow MPI extensions to generate Fortran headers using Autoconf.

For example, allow following files.

```
ompi/mpiext/example/mpif-h/mpiext_example_mpifh.h.in
ompi/mpiext/example/use-mpi/mpiext_example_usempi.h.in
ompi/mpiext/example/use-mpi-f08/mpiext_example_usempif08.h.in
```

Generated MPI extension C headers are already allowed in commit
6a7d5271c4.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-12-26 14:04:32 +09:00
KAWASHIMA Takahiro
fc311a6ca5 config: Clean Fortran type check code
If the default value of `ofc_type_size` is `$ac_cv_sizeof_int`,
`OMPI_SIZEOF_FORTRAN_*` of all unavailable types become `sizeof(int)`.
This leads `OMPI_SIZEOF_FORTRAN_REAL2 == OMPI_SIZEOF_FORTRAN_REAL`
to become true unintentionally and `OMPI_DATATYPE_MPI_REAL2` has a
wrong value in `ompi/datatype/ompi_datatype_internal.h`. This is not
an actual bug because datatypes for unavailable types are not used.
However it is confusing. I looked the source tree and the history but
could find any basis of `$ac_cv_sizeof_int`.

If we don't use `implicit none` in `OMPI_FORTRAN_GET_KIND_VALUE`, and
if a Fortran compiler does not support `ISO_C_BINDING` completely,
a random value is set in `value` and the fallback route is not used.
It is not our intention.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-12-25 17:17:57 +09:00
Jeff Squyres
c0faf34855 ompi_ext.m4: ensure ext name <= 26 characters
Ensure that MPI extensions with mpif.h bindings have names that are
<=26 characters long.  26 is the magic number that still allows us to
have an "include ..." line in the user-facing mpif-ext.h header file
that includes this extension's header file without going over 72
characters.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:59:42 +09:00
Gilles Gouaillardet
975e3cd0c9 mpiext: updates for header file locations
Per discussion on https://github.com/open-mpi/ompi/pull/6030
and https://github.com/open-mpi/ompi/pull/6145, move
around where MPI extension header files are installed (specifically:
the installation tree path does not need to match the source tree
path).

For reference, header files were installed like this :

 - <prefix>/include/openmpi/ompi/mpiext/pcollreq/mpif-h/mpiext_pcollreq_mpifh.h
 - <prefix>/include/openmpi/ompi/mpiext/pcollreq/c/mpiext_pcollreq_c.h

and they are now installed like this :

 - <prefix>/include/openmpi/mpiext/mpiext_pcollreq_mpifh.h
 - <prefix>/include/openmpi/mpiext/mpiext_pcollreq_c.h

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:40:02 +09:00
Gilles Gouaillardet
4918fc4455 Revert "fortran/mpif-h: keep include path for extension short"
This reverts commit open-mpi/ompi@848a868f7b.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:39:59 +09:00
Gilles Gouaillardet
ccbdc8fd58 Revert "c: keep include path for extension short"
This reverts commit open-mpi/ompi@27c25fa721.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:39:54 +09:00
Gilles Gouaillardet
27c25fa721 c: keep include path for extension short
move openmpi/ompi/mpiext/FOO/c/mpiext_FOO_c.h to
openmpi/ompi/mpiext/FOO_c.h in order to use consistent
paths with mpif.h extensions

Refs. open-mpi/ompi#6019

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-11-27 11:21:05 +09:00
Gilles Gouaillardet
848a868f7b fortran/mpif-h: keep include path for extension short
in order to cope with the 72 characters per line limit, move
openmpi/ompi/mpiext/FOO/mpif-h/mpiext_FOO_mpifh.h to
openmpi/ompi/mpiext/FOO_mpifh.h

Refs. open-mpi/ompi#6019

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-11-27 09:39:09 +09:00
Jeff Squyres
7be8a075ed
Merge pull request #6109 from ggouaillardet/topic/ompi_ext_fortran
configury: fix auto-generated mpi-[f08-]ext-module.F90
2018-11-26 18:11:25 -05:00
Jeff Squyres
dbe064af97
Merge pull request #5653 from bmwiedemann/userhost
Allow to override build user and host
2018-11-26 17:48:37 -05:00
Gilles Gouaillardet
475d0355d7 configury: fix auto-generated mpi-[f08-]ext-module.F90
prefer #include vs include in order to correctly handle long Fortran lines.
We use the full path, and it can be very long, this is why
it cannot be passed to the Fortran compiler.

Thanks Igor Andriyash and Axel Huebl for reporting this issue.

Refs open-mpi/ompi#6106

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-11-26 10:25:08 +09:00
KAWASHIMA Takahiro
4e6403ac0f configure: Remove $ac_cv_type_[TYPE] checks for C99 types
Now Open MPI requires a C99 compiler. Checking availability of
the following types is no more needed.

- `long long` (`signed` and `unsigned`)
- `long double`
- `float _Complex`
- `double _Complex`
- `long double _Complex`

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-11-14 09:57:10 +09:00
Gilles Gouaillardet
03eec1ee95 configury: abort when configure'd with --enable-c11-atomics but C11 atomics are not supported
Refs. open-mpi/ompi#6053

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-11-07 13:23:36 +09:00
Ralph Castain
05ac8fa71c Remove stale defunct tools
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-30 08:48:16 -07:00
Bernhard M. Wiedemann
bc23993dea Allow to override build user and host
using the standard $USER and $HOSTNAME environment variables
to make reproducible builds possible.
See https://reproducible-builds.org/ for why this is good.

This helps improve issue #3759

Signed-off-by: Bernhard M. Wiedemann <bwiedemann@suse.de>
2018-10-20 09:27:00 -04:00
Ralph Castain
1bd772e8eb Remove the stale orte-dvm code
Users should migrate to https://github.com/pmix/prrte

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-17 15:11:38 -07:00
Ralph Castain
08109acf8c Ignore --with-foo=external arguments in subdirs
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-06 06:48:13 -07:00
Jeff Squyres
7675956b8f opal_config_subdir_args.m4: fix typo
A typo inadvertantly crept in to e836dbd506.  Add the extra '-' to
make it correctly search for --with-*=internal.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-10-05 07:28:25 -07:00
Ralph Castain
e836dbd506 Strip --with-foo=internal from opal_subdir_args
Our components that have a --with-foo configure option won't know what
to do with a value of "internal". This scenario only occurs with hwloc
and libevent, both of which are statically contained in libopen-pal

Thanks to @jsquyres for the diff

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-03 11:12:59 -07:00
Ralph Castain
58ddd78760 Update PMIx detection code
Correctly pickup external 4x version, improve reporting in summary

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-10-01 15:16:25 -07:00
Gilles Gouaillardet
c6070fd2e0 fortran/use-mpi-f08: fix [p]ompi_FOO_f symbols handling
- do not generate bindings for pompi_FOO_f symbols
   (they are simply not used anywhere)

 - move ompi_FOO_f bindings out of mpi_f08.mod into
   ompi_mpifh_bindings.mod that is only used at build time

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-09-19 14:12:55 +09:00