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2390 Коммитов

Автор SHA1 Сообщение Дата
George Bosilca
f5a55ccb39 Various cleanups.
This commit was SVN r28647.
2013-06-15 16:23:11 +00:00
George Bosilca
a6c3477e89 Remove useless include.
This commit was SVN r28646.
2013-06-15 16:07:30 +00:00
Nathan Hjelm
8924140916 Per RFC: use a better hash algorithm for the opal_hash_table_*_ptr functions.
Chose the crc32 function present in opal/util/crc.c as the hash function. The
performance should be sufficient for most cases. If not we can always change
the function again.

This commit was SVN r28629.
2013-06-13 17:11:04 +00:00
Nathan Hjelm
518d1fe200 Fix two typos that prevented alps direct launch from working
This commit was SVN r28628.
2013-06-13 17:04:08 +00:00
Joshua Ladd
46362d2761 Stomps compiler warnings in HCA min-dist calculation. This should be added to cmr:v1.7:reviewer=jladd
This commit was SVN r28620.
2013-06-12 16:25:25 +00:00
Tom Naughton
d86c3ce669 + remove autogenerated 'install-sh'
This commit was SVN r28602.
2013-06-07 20:40:24 +00:00
Rolf vandeVaart
62ab008017 Fix SEGV because missing CUDA initialization.
This commit was SVN r28601.
2013-06-07 18:31:36 +00:00
Rolf vandeVaart
1230029aa1 The debug messages were swapped. Fixed.
This commit was SVN r28600.
2013-06-07 17:23:41 +00:00
George Bosilca
72877f078f Based on the MPI 3.0 count equal to zero has a clear meaning, no modification
of the original datatype are allowed (not in type map nor extent). Make it
clear in the code.
Allow 0-count cases to the contiguous memory check.

This commit was SVN r28568.
2013-05-29 16:02:54 +00:00
Jeff Squyres
6d173af329 This commit introduces a new "mindist" ORTE RMAPS mapper, as well as
some relevant updates/new functionality in the opal/mca/hwloc and
orte/mca/rmaps bases.  This work was mainly developed by Mellanox,
with a bunch of advice from Ralph Castain, and some minor advice from
Brice Goglin and Jeff Squyres.

Even though this is mainly Mellanox's work, Jeff is committing only
for logistical reasons (he holds the hg+svn combo tree, and can
therefore commit it directly back to SVN).

-----

Implemented distance-based mapping algorithm as a new "mindist"
component in the rmaps framework.  It allows mapping processes by NUMA
due to PCI locality information as reported by the BIOS - from the
closest to device to furthest.

To use this algorithm, specify:

   {{{mpirun --map-by dist:<device_name>}}}

where <device_name> can be mlx5_0, ib0, etc.

There are two modes provided:

 1. bynode: load-balancing across nodes
 1. byslot: go through slots sequentially (i.e., the first nodes are
     more loaded)

These options are regulated by the optional ''span'' modifier; the
command line parameter looks like:

    {{{mpirun --map-by dist:<device_name>,span}}}

So, for example, if there are 2 nodes, each with 8 cores, and we'd
like to run 10 processes, the mindist algorithm will place 8 processes
to the first node and 2 to the second by default. But if you want to
place 5 processes to each node, you can add a span modifier in your
command line to do that.

If there are two NUMA nodes on the node, each with 4 cores, and we run
6 processes, the mindist algorithm will try to find the NUMA closest
to the specified device, and if successful, it will place 4 processes
on that NUMA but leaving the remaining two to the next NUMA node.

You can also specify the number of cpus per MPI process. This option
is handled so that we map as many processes to the closest NUMA as we
can (number of available processors at the NUMA divided by number of
cpus per rank) and then go on with the next closest NUMA.

The default binding option for this mapping is bind-to-numa. It works
if you don't specify any binding policy. But if you specified binding
level that was "lower" than NUMA (i.e hwthread, core, socket) it would
bind to whatever level you specify.

This commit was SVN r28552.
2013-05-22 13:04:40 +00:00
Jeff Squyres
55382c1bf8 Bring over upstream hwloc trunk commit
https://svn.open-mpi.org/trac/hwloc/changeset/5592 to fix the merging
of groups when they are I/O objects.

This commit was SVN r28551.
2013-05-22 12:34:59 +00:00
Nathan Hjelm
721779d7ab Per RFC: remove old MCA parameter system.
This commit was SVN r28541.
2013-05-20 15:36:13 +00:00
Jeff Squyres
089c632cce Remove a bunch of dead code: gcc 4.7 warns of set-but-unused
variables.  So get rid of them.

This commit was SVN r28538.
2013-05-17 21:45:49 +00:00
Ralph Castain
1ec13d530c Allow simple way to request comparison to full address regardless of addr family
This commit was SVN r28519.
2013-05-14 22:08:39 +00:00
Ralph Castain
eb2edb4b2b Silence warning
This commit was SVN r28516.
2013-05-14 22:00:01 +00:00
Rolf vandeVaart
8a8ea9ba1b Fix compile error in optimize build for CUDA-aware code.
This commit was SVN r28512.
2013-05-14 21:07:27 +00:00
Ralph Castain
37088f23d8 When ipv6 disabled, we still have getaddrinfo, so use it when checking common networks for resolving to kindex
This commit was SVN r28496.
2013-05-14 15:54:46 +00:00
Ralph Castain
3fc1bafd82 fix typo
This commit was SVN r28490.
2013-05-14 12:36:45 +00:00
Ralph Castain
f4f07bdb21 Ensure the opal_ifaddrtokindex function considers the full range of address space by using the netmask
This commit was SVN r28487.
2013-05-14 03:37:44 +00:00
Ralph Castain
c33219a51b Extend the bitmap API a bit to provide a test if all bits zero
This commit was SVN r28486.
2013-05-14 03:34:57 +00:00
Jeff Squyres
4d9da92e60 Fixes trac:376: bu default the wrappr compilers will enable rpath support
in generated executables on systems that support it.  Use
--disable-wrapper-rpath to disable this behavior.  See text in
README about --disable-wrapper-rpath for more details.

This commit was SVN r28479.

The following Trac tickets were found above:
  Ticket 376 --> https://svn.open-mpi.org/trac/ompi/ticket/376
2013-05-11 00:49:17 +00:00
Jeff Squyres
cad1d920b2 Check to ensure that we have struct ifreq.ifr_mtu before we try to use
it, because Solaris although has SIOCFIGMTU, it curiously does not
have ifreq.ifr_mtu.

This commit was SVN r28460.
2013-05-07 13:51:50 +00:00
Jeff Squyres
4b9b3a81ff Update the list of post-1.5.2 r numbers from hwloc that we have
committed here.

This commit was SVN r28458.
2013-05-07 01:22:06 +00:00
Jeff Squyres
ee0cdf86fd Fix issue raised by Stefan Friedel: remove an extraneous -L that is
added by hwloc's embedding so that it doesn't appear in
libhwloc_embedded.la (and therefore propogate all the way up to
libmpi.la). 

Committed upstream in hwloc SVN r5588.

This commit was SVN r28457.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r5588
2013-05-07 01:21:18 +00:00
Ralph Castain
527ea1d090 Per the RFC, always enable libevent thread support.
This commit was SVN r28443.
2013-05-03 15:39:05 +00:00
George Bosilca
1169ebdff8 Indentation.
This commit was SVN r28426.
2013-04-30 23:26:23 +00:00
Ralph Castain
4c0dcb1aa2 Update ignores and remove build product
This commit was SVN r28412.
2013-04-29 19:02:03 +00:00
Ralph Castain
5d7a93c032 Add the ability to use an external version of libevent. Clearly not recommended at this time. I've verified that it works in limited scenarios, but more thorough testing and performance impacts need to be assessed.
Interesting how many includes had to be fixed here and there to fill in missing dependencies :-)

This commit was SVN r28411.
2013-04-29 17:02:37 +00:00
Ralph Castain
3052acd968 Fix minor typo
This commit was SVN r28410.
2013-04-29 17:02:11 +00:00
Ralph Castain
3818e88365 Remove and ignore build products
This commit was SVN r28404.
2013-04-27 00:07:18 +00:00
Jeff Squyres
5bf9fffacd As initially reported by Eric Chamberland in
http://www.open-mpi.org/community/lists/users/2013/04/21689.php, the
assert in opal_datatype_is_contiguous_memory_layout() is not always
correct -- he supplied a test case where it was not valid,
essentially:

 1. Call MPI_Type_create_indexed_block(0, ..., &newtype) and commit newtype
 1. Call MPI_Type_create_resized(newtype, 0, nonzero_value, &resized) and commit resized
 1. Call MPI_File_set_view with resized

This will eventually call opal_datatype_is_contiguous_memory_layout(),
and the assert will fail.  After some consultation with George, it was
determined that the assert() is basically good, but it needs to also
check for (count != 0).

This commit was SVN r28398.
2013-04-25 20:54:25 +00:00
Ralph Castain
b73f25e839 Add a function to return the kernel index of the corresponding interface from an IPv4/6 string or hostname
This commit was SVN r28397.
2013-04-25 19:40:34 +00:00
Ralph Castain
c081a520a3 Fix --without-hwloc
This commit was SVN r28396.
2013-04-25 19:13:56 +00:00
Ralph Castain
cef639f578 Ahem....cleanup a copy/paste error in naming of these functions
This commit was SVN r28395.
2013-04-25 15:21:53 +00:00
Nathan Hjelm
c50b99005d fix typo in opal_info_show_component_version and clean up more from ompi_info
This commit was SVN r28389.
2013-04-24 22:07:06 +00:00
Nathan Hjelm
4896b3bc4b clean up some ompi_info code
This commit was SVN r28388.
2013-04-24 21:37:24 +00:00
Ralph Castain
4fae24f2f1 Crud - missed this file, needs to go with prior commit, will add to cmr
This commit was SVN r28382.
2013-04-24 17:47:18 +00:00
Nathan Hjelm
bccf8c657a Per RFC add initial support for the MPI 3.0 tools interface.
Current MPI_T support:
  - Full cvar interface.
  - Full categories interface.
  - No pvar support at this time.

This commit was SVN r28376.
2013-04-24 15:59:23 +00:00
Ralph Castain
d721437c8d Somebody (accidentally) removed the instructions for updating libevent releases in OMPI, so replace them with at least an outline on how to do it.
This commit was SVN r28349.
2013-04-22 17:05:56 +00:00
Ralph Castain
1dc65b5fd7 Update libevent to 2.0.21-stable, but currently ignore it for all but those testing it
This commit was SVN r28348.
2013-04-22 17:01:07 +00:00
Ralph Castain
6c6681e880 Fix an error in a test in the libevent configure.ac that we introduced - there are two brackets around the entire test code, so no need for double-brackets around the array indices within it
cmr:v1.7.2

This commit was SVN r28347.
2013-04-22 15:29:44 +00:00
Rolf vandeVaart
5e1dde419c Fix some compile errors in CUDA-aware code that has crept in.
This commit was SVN r28346.
2013-04-18 15:34:16 +00:00
Jeff Squyres
c722440411 Add public functions for retrieving the MAC and MTU (paired with
r28344).

This commit was SVN r28345.

The following SVN revision numbers were found above:
  r28344 --> open-mpi/ompi@e88881c25f
2013-04-17 22:32:32 +00:00
Jeff Squyres
e88881c25f Also support getting the MAC and MTU.
This commit was SVN r28344.
2013-04-17 22:17:42 +00:00
Jeff Squyres
eb012c2aad Defensive programming: add a constructor for opal_if_t that zeros
everything out before using it.  

This is not in response to any known bug, but rather just a
pre-emptive, defensive move to help prevent bugs in code that forgets
to initialize a field.

This commit was SVN r28343.
2013-04-17 22:09:02 +00:00
Ralph Castain
d0e34adacb Add debug
This commit was SVN r28331.
2013-04-15 13:09:43 +00:00
Jeff Squyres
349ee654c1 Fix some --without-hwloc compile errors. Also remove one
assigned-but-not-used variable assignment.

This commit was SVN r28321.
2013-04-10 15:08:31 +00:00
Jeff Squyres
aef371c8f6 Fix bug introduced by r28236: make declaration and instantiation agree
on "const".

This commit was SVN r28320.

The following SVN revision numbers were found above:
  r28236 --> open-mpi/ompi@cf377db823
2013-04-10 14:10:47 +00:00
George Bosilca
43e4d3654e Fix an issue identified by Thomas Jahns and his colleague when the data
representation is not correctly optimized (it is off by the extend).

During the data representation process, if the opportunity to merge several
items appear, we replace them with the new merged element. However, if one
of the components of this merged element was comming from a "loop representation"
then the new first element of this loop must have a displacement moved by the
extent of the loop.

This commit was SVN r28319.
2013-04-09 23:01:54 +00:00
Ralph Castain
45af6cf59e The move of the orte_db framework to opal required that we create an opaque opal_identifier_t type as OPAL cannot know anything about the ORTE process name. However, passing a value down to opal and then having the db components reference it causes alignment issues on Solaris Sparc platforms. So pass the pointer instead and do the old "memcpy" trick to avoid the problem.
This commit was SVN r28308.
2013-04-08 23:34:16 +00:00