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Граф коммитов

62 Коммитов

Автор SHA1 Сообщение Дата
Gilles Gouaillardet
d5aa310884 mpiext/affinity: initialize all output variables of OMPI_Affinity_str()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-01-24 09:13:29 +09:00
Ralph Castain
1e2019ce2a Revert "Update to sync with OMPI master and cleanup to build"
This reverts commit cb55c88a8b.
2016-11-22 15:03:20 -08:00
Ralph Castain
cb55c88a8b Update to sync with OMPI master and cleanup to build
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-11-22 14:24:54 -08:00
Joshua Hursey
f6f24a4f67 build: Custom libmpi(_FOO) name option in configure
* Add a configure time option to rename libmpi(_FOO).*
   - `--with-libmpi-name=STRING`
 * This commit only impacts the installed libraries.
   Internal, temporary libraries have not been renamed to limit the
   scope of the patch to only what is needed.

For example:
```shell
shell$ ./configure --with-libmpi-name=wookie
...
shell$ find . -name "libmpi*"
shell$ find . -name "libwookie*"
./lib/libwookie.so.0.0.0
./lib/libwookie.so.0
./lib/libwookie.so
./lib/libwookie.la
./lib/libwookie_mpifh.so.0.0.0
./lib/libwookie_mpifh.so.0
./lib/libwookie_mpifh.so
./lib/libwookie_mpifh.la
./lib/libwookie_usempi.so.0.0.0
./lib/libwookie_usempi.so.0
./lib/libwookie_usempi.so
./lib/libwookie_usempi.la
shell$
```
2016-09-29 21:47:24 -05:00
Rainer Keller
0fb0913cd4 In case, we do not build Fortran, Fortran 2008 or CXX, the regexp in make_manpage.pl will delete all
lines up to the next ".fi" -- which for functions that do not implement the corresponding interface
as code will have all eliminated.
Change to delete the man page's content up to the next section header ".SH"

Also in case of make V=1, we'd like to see the command line, too.

Amend OMPI_Affinity_str according to the other man-pages definitions.
2016-05-17 14:21:35 +02:00
Gilles Gouaillardet
291a464efb configury: remove the --enable-mpi-profiling option
and directly call the PMPI_* symbols from C and Fortran bindings
2015-10-13 08:52:35 +09:00
Ralph Castain
d97bc29102 Remove OPAL_HAVE_HWLOC qualifier and error out if --without-hwloc is given 2015-09-04 16:54:40 -07:00
Nathan Hjelm
156ce6af21 periodic whitespace purge
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-08-24 09:32:33 -06:00
Rolf vandeVaart
0e87478e40 Fix macro return value when not CUDA-aware 2015-08-14 13:56:25 -04:00
Rolf vandeVaart
cb84a85d17 Build always and fix return value 2015-08-05 17:23:55 -04:00
Rolf vandeVaart
5ee2505174 Minor rewrite of text and comments 2015-07-10 13:50:06 -04:00
Rolf vandeVaart
1229dd3ed6 Fix errors from previous commit 2015-07-08 11:46:52 -04:00
Rolf vandeVaart
6372baa7b9 Some minor cleanup and renaming of query function. 2015-07-08 10:17:35 -04:00
Gilles Gouaillardet
a4cc83f4f7 mpiext/affinity: fix missing function type 2015-06-30 09:37:27 +09:00
Rolf vandeVaart
dfa4b5e474 Merge pull request #680 from rolfv/pr/add-cuda-macro
Add a macro to indicate CUDA-aware support
2015-06-29 14:24:19 -04:00
Jeff Squyres
f6882a85bb mpiext_affinity_str.c: minor stylistic updates
No real functional changes:

* Reduce #if's a little -- have a single "no hwloc" and "hwloc"
  section.
* Make a common subroutine (no_hwloc_support()) for when we don't have
  any hwloc support
2015-06-29 09:36:10 -07:00
Rolf vandeVaart
e1983ff46a Add a macro to indicate CUDA-aware support 2015-06-29 12:08:27 -04:00
Gilles Gouaillardet
6994d742fd mpiext/affinity: #if OPAL_HAVE_HWLOC most parts of the code
that allow this extension to compile if configure'd with --without-hwloc
2015-06-29 09:54:03 +09:00
Ralph Castain
2fa8167383 Remove manpages when doing distclean in the OMPI extensions area 2015-06-25 21:01:17 -07:00
Rolf vandeVaart
5aa11a2c9f Fix library name 2015-06-25 18:07:01 -04:00
Rolf vandeVaart
2750a6e237 Fix filename name 2015-06-25 17:41:44 -04:00
Rolf vandeVaart
995723ca6f Fix compilation of cuda extensions
Fix compilation
2015-06-25 17:19:14 -04:00
Ralph Castain
a390a8f5ef Add a CUDA MPI extension to provide the MPIx_CUDA_SUPPORT macro 2015-06-25 13:07:35 -07:00
Jeff Squyres
fca193d316 MPI extensions: build extensions by default
* affinity: will build unless disabled.
* cr: will build if FT is enabled, unless it is disabled.  It will
  also complain/abort if you --with-mpi-ext=cr, but FT is disabled.
* example: will only build if --with-mpi-ext=example (and .ompi_ignore
  is removed)
2015-06-25 11:28:58 -07:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Jeff Squyres
e855b19ba2 MPI extensions: rules of thumb about symbol names
This document is the result of a George Bosilca/Jeff Squyres
discussion at the developer meeting in Dallas in January of 2015.  It
attempts to provide some rules of thumb / guidance for naming
conventions of symbols in MPI extensions.
2015-01-29 06:39:44 -06:00
Ralph Castain
a8e2d6c3a6 The bulk of the remaining renaming changes, in one final glorious "blob". Thanks to Jeff for some help chasing down a few spots. Per chat with Jeff, we decided to cleanup a few things that were historical in nature:
top_ompi_srcdir  ->  OMPI_TOP_SRCDIR
top_ompi_builddir -> OMPI_TOP_BUILDDIR

We also split the srcdir/builddir flags according to their local tree (e.g., OPAL_TOP_SRCDIR), and tied them all together in configure.ac. Renamed ompi_ignore and ompi_unignore to be opal_<foo> as these are agnostic markers.

Only thing left is ompilibdir being treated similar to what we dif for srcdir/builddir. Coming soon.

This commit was SVN r31678.
2014-05-07 21:48:53 +00:00
Jeff Squyres
173c046617 build: add Automake-like silent/verbose macros for "ln -s ..." operations
Also, since I put some of the macros for these silent/verbose rules up
in the top-level Makefile.man-page-rules file, I renamed it to
Makefile.ompi-rules.

I've had this sitting around for a while; now seems like as good a
time as any to commit it.

This commit was SVN r31271.
2014-03-28 18:24:32 +00:00
Ralph Castain
081669b440 When pretty-printing binding info, we need to pass the topology down to the routine as the mapper isn't always working with the local topology - otherwise, we get an erroneous help message. Thanks to Tetsuya Mishima for reporting it
cmr=v1.7.5:reviewer=rhc:subject=fix pretty-print of bindings

This commit was SVN r30968.
2014-03-10 15:53:07 +00:00
Jeff Squyres
b0b17c62aa Protect against orte_proc_applied_binding being NULL.
It is now possible for orte_proc_applied_binding to be NULL (e.g., if
you mpirun --bind-to none), so we need to ensure we don't pass it down
to opal_hwloc_base_cset2*str().

Also, take the opprotunity to de-duplicate some strings that are used
in multiple places.

Refs trac:4073

This commit was SVN r30204.

The following Trac tickets were found above:
  Ticket 4073 --> https://svn.open-mpi.org/trac/ompi/ticket/4073
2014-01-09 23:38:34 +00:00
Ralph Castain
f179f2086b Do a better job of reporting bindings - if someone gives a spec that binds us to all processors, then we are effectively unbound and should report it clearly instead of outputting a long line of B's.
cmr=v1.7.4:reviewer=jsquyres:subject=Do a better job of reporting bindings

This commit was SVN r30179.
2014-01-09 16:16:16 +00:00
Brian Barrett
8b778903d8 Fix longstanding issue with our multi-project support. Rather than using
pkg{data,lib,includedir}, use our own ompi{data,lib,includedir}, which is
always set to {datadir,libdir,includedir}/openmpi.  This will keep us from
having help files in prefix/share/open-rte when building without Open MPI,
but in prefix/share/openmpi when building with Open MPI.

This commit was SVN r30140.
2014-01-07 22:11:15 +00:00
Jeff Squyres
eabbcd1157 Fix a pair of minor errors in the affinity MPI extension.
* Use the right length for memset/strncpy
* Return the set return value (vs. unconditionally returning
  OMPI_SUCCESS)

cmr=v1.7.4:reviewer=dgoodell:subject=Fix a pair of minor errors in the affinity MPI extension

This commit was SVN r29427.
2013-10-11 21:17:38 +00:00
Jeff Squyres
2e5c18195b We want to ignore this MPI extension in the general case -- it's just
an example (and outputs stuff to stdout!).

This commit was SVN r28654.
2013-06-19 16:01:45 +00:00
Brian Barrett
f42783ae1a Move the RTE framework change into the trunk. With this change, all non-CR
runtime code goes through one of the rte, dpm, or pubsub frameworks.

This commit was SVN r27934.
2013-01-27 23:25:10 +00:00
Josh Hursey
28681deffa Backout the ORCA commit. :(
There is a linking issue on Mac OSX that needs to be addressed before this is able to come back into the trunk.

This commit was SVN r26676.
2012-06-27 01:28:28 +00:00
Josh Hursey
542330e3a7 Commit of ORCA: Open MPI Runtime Collaborative Abstraction
This is a runtime interposition project that sits between the OMPI and ORTE layers in Open MPI.

The project is described on the wiki:
  https://svn.open-mpi.org/trac/ompi/wiki/Runtime_Interposition

And on this email thread:
  http://www.open-mpi.org/community/lists/devel/2012/06/11109.php

This commit was SVN r26670.
2012-06-26 21:42:16 +00:00
Jeff Squyres
8d161af059 Move hwloc_cpuset_t prettyprint routines down into the hwloc base:
* opal_hwloc_base_cset2str(): Make a human-readable string of a
   hwloc_cpuset_t (e.g., socket 2[core 3[hwt 1]])
 * opal_hwloc_base_cset2mapstr(): Make a map-like string of a
   hwloc_cpuset_t (e.g., [B./..])

This commit was SVN r26532.
2012-06-01 16:02:18 +00:00
Jeff Squyres
50bac6d4d7 Oops! This is a stale file (i.e., old implementation that isn't used anymore).
This commit was SVN r26415.
2012-05-09 13:35:39 +00:00
Jeff Squyres
e35ca05917 * Update svn:ignore to ignore example program
* Add "example" executable to CLEANFILES

This commit was SVN r26407.
2012-05-08 14:59:14 +00:00
Jeff Squyres
43f3332929 Add an OMPI_Affinity_str() example program.
This commit was SVN r26393.
2012-05-07 15:19:23 +00:00
Jeff Squyres
2ba10c37fe Per RFC, bring in the following changes:
* Remove paffinity, maffinity, and carto frameworks -- they've been
   wholly replaced by hwloc.
 * Move ompi_mpi_init() affinity-setting/checking code down to ORTE.
 * Update sm, smcuda, wv, and openib components to no longer use carto.
   Instead, use hwloc data.  There are still optimizations possible in
   the sm/smcuda BTLs (i.e., making multiple mpools).  Also, the old
   carto-based code found out how many NUMA nodes were ''available''
   -- not how many were used ''in this job''.  The new hwloc-using
   code computes the same value -- it was not updated to calculate how
   many NUMA nodes are used ''by this job.''
   * Note that I cannot compile the smcuda and wv BTLs -- I ''think''
     they're right, but they need to be verified by their owners.
 * The openib component now does a bunch of stuff to figure out where
   "near" OpenFabrics devices are.  '''THIS IS A CHANGE IN DEFAULT
   BEHAVIOR!!''' and still needs to be verified by OpenFabrics vendors
   (I do not have a NUMA machine with an OpenFabrics device that is a
   non-uniform distance from multiple different NUMA nodes).
 * Completely rewrite the OMPI_Affinity_str() routine from the
   "affinity" mpiext extension.  This extension now understands
   hyperthreads; the output format of it has changed a bit to reflect
   this new information.
 * Bunches of minor changes around the code base to update names/types
   from maffinity/paffinity-based names to hwloc-based names.
 * Add some helper functions into the hwloc base, mainly having to do
   with the fact that we have the hwloc data reporting ''all''
   topology information, but sometimes you really only want the
   (online | available) data.

This commit was SVN r26391.
2012-05-07 14:52:54 +00:00
Jeff Squyres
245812c34b * s/f77/fortran/gi in a lot of places
* Remove unused #defines in mpi.h.in
 * Add OMPI_PARAM_CHECK in mpi.h.in (so that we can check for it in tests)
 * Clean up some comments in mpif-common.h

This commit was SVN r26347.
2012-04-27 01:09:37 +00:00
Jeff Squyres
9986c29a4b Fix typoe to get the OMPI_Affinity_str.3in man page source is
distributed

This commit was SVN r26313.
2012-04-23 19:28:24 +00:00
Jeff Squyres
8111c5e41c Remove a few compiler warnings from the example
This commit was SVN r26303.
2012-04-19 20:02:51 +00:00
Jeff Squyres
253444c6d0 == Highlights ==
1. New mpifort wrapper compiler: you can utilize mpif.h, use mpi, and use mpi_f08 through this one wrapper compiler
 1. mpif77 and mpif90 still exist, but are sym links to mpifort and may be removed in a future release
 1. The mpi module has been re-implemented and is significantly "mo' bettah"
 1. The mpi_f08 module offers many, many improvements over mpif.h and the mpi module

This stuff is coming from a VERY long-lived mercurial branch (3 years!); it'll almost certainly take a few SVN commits and a bunch of testing before I get it correctly committed to the SVN trunk.

== More details ==

Craig Rasmussen and I have been working with the MPI-3 Fortran WG and Fortran J3 committees for a long, long time to make a prototype MPI-3 Fortran bindings implementation.  We think we're at a stable enough state to bring this stuff back to the trunk, with the goal of including it in OMPI v1.7.  

Special thanks go out to everyone who has been incredibly patient and helpful to us in this journey:

 * Rolf Rabenseifner/HLRS (mastermind/genius behind the entire MPI-3 Fortran effort)
 * The Fortran J3 committee
 * Tobias Burnus/gfortran
 * Tony !Goetz/Absoft
 * Terry !Donte/Oracle
 * ...and probably others whom I'm forgetting :-(

There's still opportunities for optimization in the mpi_f08 implementation, but by and large, it is as far along as it can be until Fortran compilers start implementing the new F08 dimension(..) syntax.

Note that gfortran is currently unsupported for the mpi_f08 module and the new mpi module.  gfortran users will a) fall back to the same mpi module implementation that is in OMPI v1.5.x, and b) not get the new mpi_f08 module.  The gfortran maintainers are actively working hard to add the necessary features to support both the new mpi_f08 module and the new mpi module implementations.  This will take some time.

As mentioned above, ompi/mpi/f77 and ompi/mpi/f90 no longer exist.  All the fortran bindings implementations have been collated under ompi/mpi/fortran; each implementation has its own subdirectory:

{{{
ompi/mpi/fortran/
  base/               - glue code
  mpif-h/             - what used to be ompi/mpi/f77
  use-mpi-tkr/        - what used to be ompi/mpi/f90
  use-mpi-ignore-tkr/ - new mpi module implementation
  use-mpi-f08/        - new mpi_f08 module implementation
}}}

There's also a prototype 6-function-MPI implementation under use-mpi-f08-desc that emulates the new F08 dimension(..) syntax that isn't fully available in Fortran compilers yet.  We did that to prove it to ourselves that it could be done once the compilers fully support it.  This directory/implementation will likely eventually replace the use-mpi-f08 version.

Other things that were done:

 * ompi_info grew a few new output fields to describe what level of Fortran support is included
 * Existing Fortran examples in examples/ were renamed; new mpi_f08 examples were added
 * The old Fortran MPI libraries were renamed:
   * libmpi_f77 -> libmpi_mpifh
   * libmpi_f90 -> libmpi_usempi
 * The configury for Fortran was consolidated and significantly slimmed down.  Note that the F77 env variable is now IGNORED for configure; you should only use FC. Example:
{{{
shell$ ./configure CC=icc CXX=icpc FC=ifort ...
}}}

All of this work was done in a Mercurial branch off the SVN trunk, and hosted at Bitbucket.  This branch has got to be one of OMPI's longest-running branches.  Its first commit was Tue Apr 07 23:01:46 2009 -0400 -- it's over 3 years old!  :-)  We think we've pulled in all relevant changes from the OMPI trunk (e.g., Fortran implementations of the new MPI-3 MPROBE stuff for mpif.h, use mpi, and use mpi_f08, and the recent Fujitsu Fortran patches).

I anticipate some instability when we bring this stuff into the trunk, simply because it touches a LOT of code in the MPI layer in the OMPI code base.  We'll try our best to make it as pain-free as possible, but please bear with us when it is committed.

This commit was SVN r26283.
2012-04-18 15:57:29 +00:00
George Bosilca
efd88e10d7 Cleanup the error codes. Get rid of all the useless ones, and
mark the distinction between ORTE and OMPI errors.

This commit was SVN r25323.
2011-10-19 03:51:53 +00:00
Jeff Squyres
e32b9a8547 Fix minor typo -- f90, not f77
This commit was SVN r24826.
2011-06-27 20:38:30 +00:00
Josh Hursey
0833734fcf Add support for F77/F90 in the Open MPI extensions interface system.
Per RFC from OMPI Devel list:
 * http://www.open-mpi.org/community/lists/devel/2011/06/9324.php

This commit was SVN r24772.
2011-06-10 20:03:06 +00:00
Brian Barrett
be8a126600 At Josh's request, make example MPI extension use the init/fini so that
the feature is actually documented.

This commit was SVN r24686.
2011-05-05 18:31:07 +00:00