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Граф коммитов

29661 Коммитов

Автор SHA1 Сообщение Дата
Andrew Janke
6ec09e40ec CONTRIBUTING.md: Fix "our open source license" link
Signed-off-by: Andrew Janke <floss@apjanke.net>
2018-12-12 05:12:16 -05:00
Andrew Janke
fb1ae874e6 Minor style tweaks to CONTRIBUTING.md
- Style it "Signed-off-by" with the quotes and second hyphen everywhere
- Replace "--" with real em-dash characters
- Capitalize "Git" in "Git commits"
- Use an em-dash in the "— The Open MPI Team" sign-off so it doesn't turn in to a one-item bulleted list

Signed-off-by: Andrew Janke <floss@apjanke.net>
2018-12-12 05:00:54 -05:00
Gilles Gouaillardet
5223501416
Merge pull request #6183 from ggouaillardet/topic/pshmem
oshmem: fix macro usage in pshmem.h
2018-12-12 15:53:40 +09:00
KAWASHIMA Takahiro
adc05f705e
Merge pull request #6174 from kawashima-fj/pr/f08-missing-handles
fortran/use-mpi-f08: Add C++ datatypes and MPI_NO_OP
2018-12-12 14:13:36 +09:00
Gilles Gouaillardet
5ea939aa54 oshmem: fix macro usage in pshmem.h
pshmem.h now includes shmem.h (since open-mpi/ompi@f46130cd20) and some macros were removed at that time.

Use the OSHMEM_HAVE_C11 macro (defined in shmem.h) instead of the
previous OSHMEMP_HAVE_C11 macrso previously defined in pshmem.h

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-12 14:03:16 +09:00
Brian Barrett
6e15128d96 mtl/ofi: Fix crash if no providers found
Commit 109d0569ff introduced a crash when an error occurred
before ofi_ctxt was allocated, including when no providers
passed the selection logic.  Properly check that the pointer
is not NULL in the error cleanup code before dereferencing
the pointer.

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2018-12-11 15:46:18 -08:00
Jeff Squyres
6f7fbd1676
Merge pull request #6158 from ggouaillardet/topic/mpiext-path-updates
mpiext: updates for header file locations
2018-12-11 13:01:46 -05:00
Gilles Gouaillardet
0b42f3d5ef
Merge pull request #6175 from ggouaillardet/topic/uct_configury
btl/uct: fix a typo in configure.m4
2018-12-11 15:13:53 +09:00
Gilles Gouaillardet
b89deeb1bb btl/uct: fix a typo in configure.m4
remove whitespace around '=' when setting btl_uct_LIBS

Thanks Ake Sandgren for reporting this

Refs. open-mpi/ompi#6173

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-11 14:23:53 +09:00
KAWASHIMA Takahiro
63ecf01610 fortran/use-mpi-f08: Add C++ datatypes and MPI_NO_OP
Though the MPI standard does not have `MPI_CXX_COMPLEX`, `mpi.h`,
`mpif.h`, and `mpi.mod` have it. So I added it for consistency.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-12-11 13:08:29 +09:00
KAWASHIMA Takahiro
e0c5bad195 fortran/use-mpi-f08: Remove unnecessary ;
Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-12-11 09:06:21 +09:00
Yossi Itigin
c28ba954b9
Merge pull request #6132 from bertwesarg/pshmem-includes-shmem
OSHMEM: Let `pshmem.h` include `shmem.h` to be stand-alone again
2018-12-10 18:01:40 +02:00
Matias Cabral
cdb952f66d
Merge pull request #6170 from matcabral/remove_psm2_lower_p
MTL/PSM2: add missing default priority
2018-12-07 16:11:45 -08:00
Matias A Cabral
c76c6d8b28 MTL/PSM2: add missing default priority
Missing default priority after PR #6153

Signed-off-by: Matias Cabral <matias.a.cabral@intel.com>
2018-12-07 14:46:34 -08:00
Matias Cabral
0b821f2184
Merge pull request #6153 from matcabral/remove_psm2_lower_p
MTL/PSM2: Do not lower the priority when all processes are local.
2018-12-07 10:19:53 -08:00
KAWASHIMA Takahiro
4be5a6cdc8
Merge pull request #6159 from kawashima-fj/pr/fix-type-create-f90
mpi/c: Fix MPI_TYPE_CREATE_F90_{REAL,COMPLEX}
2018-12-08 01:41:20 +09:00
Gilles Gouaillardet
260cea323b
Merge pull request #6166 from ggouaillardet/topic/btl_uct_fix_warning
btl/uct: fix a warning
2018-12-07 17:01:40 +09:00
Gilles Gouaillardet
78aa6fdd1d btl/uct: fix a warning
Use the PRIsize_t macro to correctly print a size_t

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-07 16:16:35 +09:00
Nathan Hjelm
9007819c0b
Merge pull request #6154 from hjelmn/uct_updates
btl/uct: fix some issues when using UCX over ugni
2018-12-06 10:03:59 -07:00
KAWASHIMA Takahiro
6fb01f64fe mpi/c: Fix MPI_TYPE_CREATE_F90_{REAL,COMPLEX}
This commit fixes edge cases of `r = 38` and `r = 308`.

As defined in the MPI standard, `TYPE_CREATE_F90_REAL` and
`TYPE_CREATE_F90_COMPLEX` must be consistent with the Fortran
`SELECTED_REAL_KIND` function. The `SELECTED_REAL_KIND` function is
defined based on the `RANGE` function. The `RANGE` function returns
`INT(MIN(LOG10(HUGE(X)), -LOG10(TINY(X))))` for a real value `X`.

The old code considers only `INT(LOG10(HUGE(X)))` using `*_MAX_10_EXP`.
This commit adds `INT(-LOG10(TINY(X)))` part using `*_MIN_10_EXP`.

This bug affected the following `p`-`r` combinations.

| p             | r   | expected  | returned  | expected  | returned  |
| :------------ | --: | :-------- | :-------- | :-------  | :-------- |
| MPI_UNDEFINED |  38 | REAL8     | REAL4     | COMPLEX16 | COMPLEX8  |
| 0 <= p <= 6   |  38 | REAL8     | REAL4     | COMPLEX16 | COMPLEX8  |
| MPI_UNDEFINED | 308 | REAL16    | REAL8     | COMPLEX32 | COMPLEX16 |
| 0 <= p <= 15  | 308 | REAL16    | REAL8     | COMPLEX32 | COMPLEX16 |

MPICH returns the same result as Open MPI with this fix.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-12-06 16:48:23 +09:00
Jeff Squyres
c0faf34855 ompi_ext.m4: ensure ext name <= 26 characters
Ensure that MPI extensions with mpif.h bindings have names that are
<=26 characters long.  26 is the magic number that still allows us to
have an "include ..." line in the user-facing mpif-ext.h header file
that includes this extension's header file without going over 72
characters.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:59:42 +09:00
Gilles Gouaillardet
975e3cd0c9 mpiext: updates for header file locations
Per discussion on https://github.com/open-mpi/ompi/pull/6030
and https://github.com/open-mpi/ompi/pull/6145, move
around where MPI extension header files are installed (specifically:
the installation tree path does not need to match the source tree
path).

For reference, header files were installed like this :

 - <prefix>/include/openmpi/ompi/mpiext/pcollreq/mpif-h/mpiext_pcollreq_mpifh.h
 - <prefix>/include/openmpi/ompi/mpiext/pcollreq/c/mpiext_pcollreq_c.h

and they are now installed like this :

 - <prefix>/include/openmpi/mpiext/mpiext_pcollreq_mpifh.h
 - <prefix>/include/openmpi/mpiext/mpiext_pcollreq_c.h

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:40:02 +09:00
Gilles Gouaillardet
4918fc4455 Revert "fortran/mpif-h: keep include path for extension short"
This reverts commit open-mpi/ompi@848a868f7b.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:39:59 +09:00
Gilles Gouaillardet
ccbdc8fd58 Revert "c: keep include path for extension short"
This reverts commit open-mpi/ompi@27c25fa721.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 15:39:54 +09:00
Gilles Gouaillardet
a21602d993
Merge pull request #6156 from ggouaillardet/topic/ORTE_WANT_REPO_REV
cleanup: remove the unused (and unexpanded) {ORTE,OMPI}_WANT_REPO_REV macro
2018-12-06 13:59:26 +09:00
George Bosilca
1d8ad9281f Add more details about what is going on.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-12-06 13:30:58 +09:00
George Bosilca
88a693bf71 Add a test for very large data.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-12-06 13:30:58 +09:00
Gilles Gouaillardet
fbb5bb8860 opal/datatype: correctly handle large datatypes
Always use size_t (instead of converting to an uint32_t) in order to
correctly support large datatypes.

Thanks Ben Menadue for the initial bug report

Refs open-mpi/ompi#6016

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 13:30:58 +09:00
Gilles Gouaillardet
a152aa215e cleanup: remove the unused (and unexpanded) {ORTE,OMPI}_WANT_REPO_REV macro
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-06 13:13:13 +09:00
Nathan Hjelm
e07a64c52d btl/uct: fix some issues when using UCX over ugni
Though not a recommended configuration it is possible to use Open MPI
over UCX over uGNI. This configuration had some issues related to the
connection management and tl selection. This commit fixes those
issues.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-12-05 16:30:54 -07:00
George Bosilca
74f2365d6e
Remove most (all) warnings from the new TreeMatch.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-12-05 15:38:39 -05:00
Guillaume Mercier
27aa34e53f
New version based on TM 1.3
Optimize_topology is commented for now until bug resolved in TM

Signed-off-by: Guillaume Mercier <guillaume.mercier@bordeaux-inp.fr>
2018-12-05 15:38:39 -05:00
Gilles Gouaillardet
fccb3e7514
Merge pull request #6137 from ggouaillardet/topic/ucx_warning
btl/openib: delay UCX warning to add_procs()
2018-12-05 11:50:10 +09:00
Matias A Cabral
fc8582c560 MTL/PSM2: Do not lower the priority when all processes are local.
The intention of lowering the priority when all processes are local
was to favor Vader BTL. However, in builds including the OFI MTL it
gets selected instead.

Reviewed-by: Spruit, Neil R <neil.r.spruit@intel.com>
Reviewed-by: Gopalakrishnan, Aravind <aravind.gopalakrishnan@intel.com>
Signed-off-by: Matias Cabral <matias.a.cabral@intel.com>
2018-12-04 15:31:09 -08:00
Matias Cabral
abd34620f4
Merge pull request #5972 from aravindksg/ofi_sep_master
MTL/OFI: Add OFI Scalable Endpoint support
2018-12-04 13:07:44 -08:00
Nathan Hjelm
3113d20988
Merge pull request #6144 from yosefe/topic/ucx-components-add-owner-txt
ucx: add owner.txt for components
2018-12-03 10:58:56 -07:00
Aravind Gopalakrishnan
109d0569ff MTL/OFI: Add OFI Scalable Endpoint support
OFI MTL supports OFI Scalable Endpoints feature as means to improve
multi-threaded application throughput and message rate. Currently the feature
is designed to utilize multiple TX/RX contexts exposed by the OFI provider in
conjunction with a multi-communicator MPI application model. For more
information, refer to README under mtl/ofi.

Reviewed-by: Matias Cabral <matias.a.cabral@intel.com>
Reviewed-by: Neil Spruit <neil.r.spruit@intel.com>
Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
2018-12-03 09:56:52 -08:00
George Bosilca
c6f73e8883
First step of the integration with the new TreeMatch.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-12-02 20:05:03 -05:00
Yossi Itigin
09e13ad7b0 sshmem_ucx: add owner.txt
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2018-12-02 11:25:30 +02:00
Yossi Itigin
83cca9d52a ucx: add owner.txt for components
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2018-12-01 17:14:03 +02:00
Matias Cabral
f784ce3459
Merge pull request #6142 from matcabral/remove_lower_ofi_p
MTL/OFI: revert PR 6082
2018-11-30 14:50:28 -08:00
matcabral
6a15712df5 MTL/OFI: revert PR 6082
Revert to avoid issues with dynamic processes.

Signed-off-by: matcabral <matias.a.cabral@intel.com>
2018-11-30 13:44:39 -08:00
Matias Cabral
ef5db1b752
Merge pull request #6082 from matcabral/lower_mtl_ofi_p
MTL/OFI: Lower priority when all procs are local
2018-11-30 12:05:40 -08:00
Ralph Castain
6c166e202d
Merge pull request #6138 from rhc54/topic/rmap
Fix typo for rmaps_base_oversubscribe
2018-11-29 08:35:39 -08:00
Ralph Castain
c86fede9df Fix typo for rmaps_base_oversubscribe
Causes the MCA param to be ignored, while the cmd line option still
works.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-11-29 07:27:46 -08:00
Gilles Gouaillardet
0a2ce58040 btl/openib: delay UCX warning to add_procs()
If UCX is available, then pml/ucx will be used instead of
pml/ob1 + btl/openib, so there is no need to warn about
btl/openib not supporting Infiniband.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-11-29 16:20:55 +09:00
Jeff Squyres
c5292a0094
Merge pull request #6133 from jsquyres/readme-fix-typo
README: Fix a typo
2018-11-28 17:51:24 -05:00
Jeff Squyres
e6241eaf6b README: Fix a typo
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-11-28 14:01:09 -08:00
Bert Wesarg
f46130cd20 OSHMEM: Let pshmem.h include shmem.h to be stand-alone again
See #6093

Signed-off-by: Bert Wesarg <bert.wesarg@tu-dresden.de>
2018-11-28 21:24:05 +01:00
Ralph Castain
52c455f16e
Merge pull request #6125 from rhc54/topic/pset
Support process set names and update ignores
2018-11-27 12:21:36 -08:00