1
1
Граф коммитов

108 Коммитов

Автор SHA1 Сообщение Дата
Mike Dubman
1657d6047c OSHMEM: fix warnings
Thanks to Jeff for spotting.

fixed by Igor, reviewed by Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30951.
2014-03-06 11:14:00 +00:00
Mike Dubman
361f15d5d7 OSHMEM: fix use of opal_verbose
fixed by Roman, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30943.
2014-03-05 08:49:14 +00:00
Mike Dubman
1f69e2d588 OSHMEM: fix warn in macro
fixed by Elena, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30897.
2014-03-01 07:54:48 +00:00
Mike Dubman
d584869dda OSHMEM: memheap mkey exchange fix
fix situations where cluster nodes can have different btls

Fixed by Roman, reviewed by Igor, Mike
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30877.
2014-02-27 14:02:30 +00:00
Mike Dubman
e466fee747 OSHMEM: memheap framework fix warn, remove verbs deps
fixed by Igor, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30874.
2014-02-27 07:22:57 +00:00
Joshua Ladd
d1baf3f00c Stop linking in verbs stuff in oshmem/mca/memheap/base now that we have the sshmem framework.
Refs trac:4261

This commit was SVN r30858.

The following Trac tickets were found above:
  Ticket 4261 --> https://svn.open-mpi.org/trac/ompi/ticket/4261
2014-02-26 20:28:47 +00:00
Mike Dubman
4572bd58e5 OSHMEM: fix bug in scoll/mpi, add fortran support
dtypes support to oshmem scoll mpi. added comment to
oshmem scoll mpi component regarding casting size_t to int.

Fixed by Elena, Reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30856.
2014-02-26 17:06:44 +00:00
Mike Dubman
323e4418b9 OSHMEM: extract memheap allocate methods into separate framework
- similar to opal/shmem
- next step is some refactoring and merge into opal/shmem
 Developed by Igor, reviewed by AlexM, MikeD

This commit fixes trac:4261.

This commit was SVN r30855.

The following Trac tickets were found above:
  Ticket 4261 --> https://svn.open-mpi.org/trac/ompi/ticket/4261
2014-02-26 16:32:23 +00:00
Ralph Castain
fbeb0cac10 Silence warning
cmr=v1.7.5:reviewer=ompi-gk1.7

This commit was SVN r30828.
2014-02-25 23:50:12 +00:00
Joshua Ladd
a0a850a77b Fixing warnings in oshmem/mca/scoll/mpi.
Refs trac:4302

This commit was SVN r30824.

The following Trac tickets were found above:
  Ticket 4302 --> https://svn.open-mpi.org/trac/ompi/ticket/4302
2014-02-25 21:24:15 +00:00
Mike Dubman
202bf90287 OSHMEM: ikrit optimization
no need pre-register heap if MXM/ud is used
fixed by Alex, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30809.
2014-02-25 15:03:53 +00:00
Mike Dubman
180e4f06bf OSHMEM: add support for MPI collectives
oshmem collective can select MPI collectives modules as provider.

Developed by Elena, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30808.
2014-02-25 15:01:10 +00:00
Mike Dubman
5ed50793d5 OSHMEM: misc ikrit/mxm enhancements
- fix mxm/tl selection logic
- do not require memory registration if mxm/ud was selected

fixed by Alex, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30802.
2014-02-24 07:06:57 +00:00
Mike Dubman
ffee1e0424 oshmem: roll back scoll/fca use shmem barrir
have issue, rolling back

fixed by Elena, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30788.
2014-02-21 11:40:31 +00:00
Mike Dubman
684e78e669 OSHMEM: OOM in yoda
fix: do not fail on blm allocation error, wait for some puts to complete and retry

fixed by Roman, reviewed by Mike/Alex
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30779.
2014-02-20 09:53:32 +00:00
Mike Dubman
49ee63f4b8 MXM: do not enforce version check
- MXM uses libtool versioning scheme which is enough, no need additional in OMPI

reviewed by yossi

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30768.
2014-02-18 19:44:37 +00:00
Mike Dubman
982149d8c8 OSHMEM: various fixes
1. fix in oshmem scoll component: basic algorithms should
   call basic collectives since their implementation
   incompatible with others (fca, hcoll).

2. Set OPAL_EVLOOP_ONCE flag ON for libevent in the case 
   of yoda smpl. Otherwise there is possible deadlock in 
   atomic_basic_lock call

fixed by Val, Igor, reviewed by Miked

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30762.
2014-02-18 15:07:03 +00:00
Mike Dubman
fe692eb107 OSHMEM: remove unused code, rename mca param
- remove old, unused code
- rename mca param for oshmem preconnect to match mpi naming scheme.

fixed by Alex, reviewed by Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30748.
2014-02-17 14:57:12 +00:00
Mike Dubman
96142b31bd shmem: remove unused defines
fixed by Roman, reviewed by MikeD
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30735.
2014-02-15 06:43:08 +00:00
Mike Dubman
608269ed72 fca: support relocation of fca packages to opal_prefix/../fca
reviewed by AlexM
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30728.
2014-02-14 14:49:41 +00:00
Ralph Castain
f7abaee8c4 Some windows cleanups - thanks to Marco Atzeri for the patch
cmr=v1.7.5:reviewer=miked

This commit was SVN r30720.
2014-02-13 23:59:39 +00:00
Mike Dubman
732f108ae4 OSHMEM: fix segv on finalize with spml/yoda
avoid double call to bml
fixed by AlexMa, reviewed by AlexM and MikeD

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30715.
2014-02-13 04:42:19 +00:00
Jeff Squyres
b4effd200f Remove num_pes,my_pe declarations from shmem.fh.
The openshmem test suite
(http://bongo.cs.uh.edu/site/sites/default/site_files/openshmem-test-suite-release-1.0d.tar.bz2)
declares num_pes and my_pe in each Fortran test file -- it apparently
doesn't expect shmem.fh to declare these functions.  Sigh.

cmr=v1.7.5:reviewer=miked:subject=the openshmem community is crazy

This commit was SVN r30660.
2014-02-11 01:36:26 +00:00
Mike Dubman
28949efcaf OSHMEM: MXM2: a2a perf improvement on large scale
Allow only limited number of coonections to have 'puts'
that do not require remote completion ack. That will
greatly improve performance of shmem_fence()/shmem_quiet()
and shmem_barrier() when there are many active connections.

fixed by Alex, reviewed by Miked

Refs trac:3763

This commit was SVN r30573.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-06 08:42:45 +00:00
Mike Dubman
27a763c86c OSHMEM: finalization fixes
Fixes mxm endpoint destruction and hung during
SHMEM finalization.

Add a barrier between spml del procs and finalization.
Not having it caused hungs because ikrit spml can not properly
disconnect if its peer already finizalized.

Refs trac:3763

This commit was SVN r30572.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-06 08:40:43 +00:00
Jeff Squyres
b7d10b3499 Remove some unused AC_DEFINE's, and also remove a redundant AC_DEFINE
This commit was SVN r30564.
2014-02-05 12:24:02 +00:00
Mike Dubman
7e5031374e OSHMEM: Apply Jeff`s comments to fortran configure logic
Refs trac:3763

This commit was SVN r30530.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-03 09:47:56 +00:00
George Bosilca
489f093b59 It didn't compile. Cleanup a little the headers inclusion.
This commit was SVN r30473.
2014-01-29 14:30:55 +00:00
Mike Dubman
30e1e49a9e OSHMEM: refactoring to reuse common functions from different components.
This is preparation for moving verbs dependent code out from memheap/base component

Refs: #3763

This commit was SVN r30454.
2014-01-28 07:30:36 +00:00
Mike Dubman
ffe662c98e OSHMEM: use shmem barrier instead of internal
Refs: 3763

This commit was SVN r30427.
2014-01-25 07:49:56 +00:00
Mike Dubman
59d4bb662c OSHMEM: rework fortran support detection
fix the case, to enable oshmem-fortran when "with-shmem" was specified and "ompi-fortran" was enabled and happy.

fixed by Roman, reviewed by Miked

Refs trac:3763

This commit was SVN r30391.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-23 07:49:13 +00:00
Mike Dubman
0d8424e0a6 OSHMEM: Fixes issue with recent segfault in finalize related to mca_base_group_unselect.
We need to explicitly call mca_base_group_unselect in finalize
for each group that are not freed with oshmem_group_cache_list_free before we unloading scoll framework.

Refs trac:3763

This commit was SVN r30311.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-17 16:57:12 +00:00
Mike Dubman
b7750ccbf4 OSHMEM: bml initialization is moved into ompi_init
it fixes race of mca_var segfault in finalization of shmem

based on this thread:
http://www.open-mpi.org/community/lists/devel/2014/01/13778.php

Refs trac:3763

fixed by Igor, reviewed by Brian

This commit was SVN r30304.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-17 06:09:29 +00:00
Mike Dubman
9f5abfb233 OSHMEM: fix fortran selection logic and refactoring
refactoring inspired by this thread: http://www.open-mpi.org/community/lists/devel/2014/01/13744.php
fix oshmem fortran selection logic, Thanks to Paul for info
Refs trac:3763

This commit was SVN r30286.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-14 13:23:44 +00:00
Mike Dubman
4cc9b328b9 OSHMEM: make sure scoll components are opened/closed
Refs trac:3763

This commit was SVN r30267.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-13 15:00:17 +00:00
Jeff Squyres
448a4707ce Portability fix: better checking for MAP_ANONYMOUS and MAP_ANON.
Thanks to Paul Hargrove for identifying the issue and suggesting the
fix.

This commit was SVN r30227.
2014-01-10 15:20:34 +00:00
Jeff Squyres
d953e46a68 Fix compiler warnings: PRIu64 is the proper way to output uint64_t
values.  See https://svn.open-mpi.org/trac/ompi/wiki/PrintfCodes.

This commit was SVN r30149.
2014-01-08 02:31:30 +00:00
Brian Barrett
8b778903d8 Fix longstanding issue with our multi-project support. Rather than using
pkg{data,lib,includedir}, use our own ompi{data,lib,includedir}, which is
always set to {datadir,libdir,includedir}/openmpi.  This will keep us from
having help files in prefix/share/open-rte when building without Open MPI,
but in prefix/share/openmpi when building with Open MPI.

This commit was SVN r30140.
2014-01-07 22:11:15 +00:00
Mike Dubman
6fb0dbdab5 OSHMEM: port 6 patches from git mirror to svn
Subject: [PATCH 1/6] OSHMEM: mkey refactoring
mkey can be either shared memory style id or it can be
arbitrary byte string
removed hack that used spml_context to store generic keys
coding style fixes

Subject: [PATCH 2/6] OSHMEM: added support of MXM 2.0 rc transport
coding style fixed, typos, check error condition

Subject: [PATCH 3/6] OSHMEM: mxm2.0: remove PTL_SELF
There is no need to have special case for 'self'
connection in mxm 2.0. It also solves the problem
of passing incorrect mkey when doing put/get to
self

Subject: [PATCH 4/6] OSHMEM: fixes mxm fadd
give a dummy buffer if doing atomic add

Subject: [PATCH 5/6] OSHMEM: mxm2.0: do not use MXM_REQ_FLAG_SEND_LAZY
Subject: [PATCH 6/6] OSHMEM: remove unused include, causes compilation fail on ubuntu

Refs trac:3763

This commit was SVN r30129.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-07 11:56:36 +00:00
Mike Dubman
92cf175e9e OSHMEM: exchange mxm(ikrit) endpoints via MPI_Allgather, code cleanup, remove unused
Refs trac:3763

This commit was SVN r30089.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-26 10:53:48 +00:00
Mike Dubman
e2f372ac4b OSHMEM: set default transport for mxm under OSHMEM to be ud, can be overwritten with MXM_OSHMEM_TL= variable
Refs trac:3763

This commit was SVN r30088.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-26 08:05:08 +00:00
Ralph Castain
885fcac488 Forward declaration must match eventual function - both must be static
Refs trac:3763

This commit was SVN r30082.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-25 02:28:22 +00:00
Mike Dubman
cc4ab51b71 SHMEM: silence warning
Refs trac:3763

This commit was SVN r30077.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-24 16:18:48 +00:00
Mike Dubman
2e138ddd05 OSHMEM: Use MPI calls for mkey exchange
fixed by Alex, reviewed by miked
Refs: 3763

This commit was SVN r30056.
2013-12-23 09:20:42 +00:00
Mike Dubman
6dbce7f9f8 fix compile warning
Refs trac:3763

This commit was SVN r30004.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-20 11:03:09 +00:00
Mike Dubman
d70f93b2dc fix corrupted verbose output in oshmem
set yoda prio lower than ikrit
fix anon unions in ikrit
Refs trac:3763

This commit was SVN r29976.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-19 11:59:32 +00:00
Ralph Castain
da6551bd3d Update opal_backtrace_print call in oshmem
This commit was SVN r29960.
2013-12-18 23:15:40 +00:00
Mike Dubman
b95a9d865a rework SHMEM verbose macros to enable if --enable-debug specified
Refs trac:3763

This commit was SVN r29921.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-16 09:13:27 +00:00
Mike Dubman
ac4573b6db code formatting according to OMPI code style
Refs trac:3763

This commit was SVN r29908.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2013-12-14 14:39:56 +00:00
Brian Barrett
121ca26c59 Per discussion at Develoepr's Meeting, remove Solaris threads support. Solaris
will just fall back to pthreads, which should be no problem.

This commit was SVN r29893.
2013-12-13 20:07:11 +00:00