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Граф коммитов

20003 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
579a2d10cc bcol/ptpcoll: initialize all pointers in the module to NULL to avoid possible
problems when the module is being destructed.

References #4331

cmr=v1.7.5:reviewer=manjugv

This commit was SVN r30964.
2014-03-07 21:16:20 +00:00
Nathan Hjelm
da2a68f669 coll/ml: fix bcast buffer size calculation
cmr=v1.7.5:reviewer=manjugv

This commit was SVN r30963.
2014-03-07 21:00:08 +00:00
Mike Dubman
c784aab7d8 OSHMEM: scoll fix corner cases
- fix segv
- proper enable/disable and prio handling

fixed by Elena, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30962.
2014-03-07 12:31:29 +00:00
Adrian Reber
b51733c456 fix "warning: 'sstore_stage_select' defined but not used"
In the function sstore_stage_select() the local variables
were set up and defined. Unfortunately this function was
never called. This patch moves variable set up to the
sstore_stage_register() function and checks the return
values of the variable initialization.

This commit was SVN r30958.
2014-03-06 16:53:27 +00:00
Mike Dubman
2828afddce OSHMEM: fix output, lower prio for scoll/mpi
fixed by Roman/Elena, reviewed by Igor/Mike

cmr=v1.7.5:revewer=ompi-rm1.7

This commit was SVN r30957.
2014-03-06 16:17:58 +00:00
Mike Dubman
a1044dd517 OSHMEM: fix fortran selection logic
based on offline discussion and agreement with Jeff

fixed by Roman, reviewed by Igor/Mike
cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30952.
2014-03-06 11:22:30 +00:00
Mike Dubman
1657d6047c OSHMEM: fix warnings
Thanks to Jeff for spotting.

fixed by Igor, reviewed by Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30951.
2014-03-06 11:14:00 +00:00
Ralph Castain
7a44af375c Add an FT event state and set the state machine to callback to the OOB base ft event when activated
This commit was SVN r30950.
2014-03-06 02:44:29 +00:00
Ralph Castain
9793909988 Correct the constant we check for an error. Thanks to George for noticing it.
cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r30949.
2014-03-06 02:21:27 +00:00
Ralph Castain
fc2dd6ac48 Per Jeff's request, add a more detailed comment as to why we are turning off the warning at this time.
Refs trac:4339

This commit was SVN r30948.

The following Trac tickets were found above:
  Ticket 4339 --> https://svn.open-mpi.org/trac/ompi/ticket/4339
2014-03-06 02:17:25 +00:00
Nathan Hjelm
0af741810c coll/ml: do not access group proc pointers directly. use ompi_comm_peer_lookup instead.
Resolves an issue seen with --enable-sparse-groups.

cmr=v1.7.5:reviewer=manjugv

This commit was SVN r30945.
2014-03-05 22:57:21 +00:00
Jeff Squyres
554303af08 Two minor usnic fixes
* clang warning stomp
* memory barrier for volatile variable use

These can go to 1.7.5 or can slip to v1.8 -- RM decision.

Submitted by Jeff Squyres, reviewed by Dave Goodell

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30944.
2014-03-05 21:21:53 +00:00
Mike Dubman
361f15d5d7 OSHMEM: fix use of opal_verbose
fixed by Roman, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30943.
2014-03-05 08:49:14 +00:00
Ralph Castain
c9465d97b4 Resolve a race condition when responding to a SIGTERM to ensure that any final message from the application is correctly output. Remove a duplicate command, reduce the priority of the daemon exit command to MSG so that the IOF will have a chance to output cached messages. Update the signal trapping test.
Thanks to Paul Kapinos for reporting the problem.

cmr=v1.7.5:reviewer=jsquyres:subject=resolve a race condition

This commit was SVN r30942.
2014-03-05 04:38:17 +00:00
Ralph Castain
a2b539c763 Per the telecon, silence the warning for 1.7.5 to give us time to consider a better permanent solution
Refs trac:4339

This commit was SVN r30941.

The following Trac tickets were found above:
  Ticket 4339 --> https://svn.open-mpi.org/trac/ompi/ticket/4339
2014-03-05 03:02:29 +00:00
Ralph Castain
50c30d62ca Repair builds without hwloc
cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r30940.
2014-03-05 02:48:15 +00:00
Jeff Squyres
fbde50e7cd Fix ibv_port_query() usnic extension usage
* Older versions of libusnic_verbs actually return 0 when querying for
  an unknown port.  So also check for a magic ID in the returned data
  to *really* know if the usnic extensions are supported.
* Use a union (in the common_verbs area) and memcpy (in the btl) to
  avoid undefined C type aliasing behavior.
* Ensure to memset the function table to 0 if the usnic extensions
  are not supported.

Submitted by Jeff Squyres, reviewed by Dave Goodell.

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30935.
2014-03-04 22:11:47 +00:00
Ralph Castain
0461e54875 Add missing headers to tarball
This commit was SVN r30932.
2014-03-04 16:59:15 +00:00
Nathan Hjelm
5a4037df4f osc/rdma: fix typo in rdma osc component.
cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r30931.
2014-03-04 16:57:56 +00:00
Nathan Hjelm
cb6670b340 bcol/basesmuma: use framework output for error message and fix a rounding error.
cmr=v1.7.5:reviewer=pasha

This commit was SVN r30929.
2014-03-04 16:55:57 +00:00
Adrian Reber
4ca07ae125 re-introduce distill_checkpoint_ready
In the OPAL_ENABLE_FT_CR code path there used to be a variable
'mca_base_component_distill_checkpoint_ready' which got removed.
The FT code was not compiling and while trying to get it to compile
again the old variable was #ifdef'd out. This re-introduces the
variable with a new name 'opal_base_distill_checkpoint_ready'
and enables the code previously #ifdef'd out.

This removes the last hack introduced to get the FT code to compile
again.

This commit was SVN r30928.
2014-03-04 16:14:46 +00:00
Adrian Reber
e5bef82ee1 OPAL_ENABLE_FT_CR: remove compiler warnings
When compiling --with-ft there are a few compiler warnings about
unused variables. This patch fixes those compiler warnings.

This commit was SVN r30927.
2014-03-04 15:28:07 +00:00
Rolf vandeVaart
c2ae29d860 Adjust priorities in smcuda BTL so it is used when CUDA-aware compiled in.
cmr=v1.7.5:reviewer=hjelmn

This commit was SVN r30925.
2014-03-04 14:44:44 +00:00
Mike Dubman
e630b0f47a update ignore list
disable coll-ml

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30924.
2014-03-04 14:23:12 +00:00
Vasily Filipov
5acb96d11b BTL/OPENIB: always define BTL_OPENIB_RDMACM_IB_ADDR to 0 or 1.
This commit was SVN r30923.
2014-03-04 08:54:17 +00:00
Ralph Castain
da4cb39683 If we can't find a route to communicate, emit an error message rather than just exiting with a non-zero status
cmr=v1.7.5:reviewer=jsquyres:subject=print error if cannot communicate

This commit was SVN r30922.
2014-03-04 04:57:53 +00:00
Jeff Squyres
6710c2ef3f usnic: remove unnecessary header union
Realistically, the usnic BTL doesn't need to know anything about the
underlying transport except for its header length (so that it knows
where the payload begins in a received buffer).  So remove the use of
the specific transport prefix union and just rely on the usnic verbs
extension to tell us what the header length is if we're using the
usNIC/UDP transport, or sizeof(struct ibv_grh) if we're using usNIC/L2
transport.

This commit was SVN r30914.
2014-03-03 21:33:12 +00:00
Jeff Squyres
05af83d5d8 common_verbs: Remove usnic magic probe test
Check the IBV_TRANSPORT_* values.  In the case of IBV_TRANSPORT_IWARP,
there's an ambiguity and we need to also check to see whether the
usnic verbs externsion probe exists.

This commit was SVN r30913.
2014-03-03 21:32:44 +00:00
Jeff Squyres
d61765cb2a usnic: use the new usnic verbs extensions
If they exist, call the usnic verbs extensions to both enable UDP
support and get the UD receiver header length that should be used
(rather than assume 40/struct GRH).

This commit was SVN r30912.
2014-03-03 21:31:42 +00:00
Nathan Hjelm
9e92c5be53 osc/sm: check for pthread_condattr_setpshared and pthread_mutexattr_setpshared. fall
back on barrier if either function doesn't exist.

cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r30911.
2014-03-03 17:09:09 +00:00
Nathan Hjelm
dc3d4ffbf3 osc/sm: do not use gcc specific calls
cmr=v1.7.5:reviewer=jsquyres

This commit was SVN r30910.
2014-03-03 16:47:29 +00:00
Ralph Castain
0ac97761cc Now that we are binding by default, the issue of #slots and what to do when oversubscribed has become a bit more complicated. This isn't a problem in managed environments as we are always provided an accurate assignment for the #slots, or when -host is used to define the allocation since we automatically assume one slot for every time a node is named.
The problem arises when a hostfile is used, and the user provides host names without specifying the slots= paramater. In these cases, we assign slots=1, but automatically allow oversubscription since that number isn't confirmed. We then provide a separate parameter by which the user can direct that we assign the number of slots based on the sensed hardware - e.g., by telling us to set the #slots equal to the #cores on each node. However, this has been set to "off" by default.

In order to make this a little less complex for the user, set the default such that we automatically set #slots equal to #cores (or #hwt's if use_hwthreads_as_cpus has been set) only for those cases where the user provides names in a hostfile but does not provide slot information.

Also cleanup some a couple of issues in the mapping/binding system:

* ensure we only override the binding directive if we are oversubscribed *and* overload is not allowed

* ensure that the MPI procs don't attempt to bind themselves if they are launched by an orted as any binding directive (no matter what it was) would have been serviced by the orted on launch

* minor cleanup to the warning message when oversubscribed and binding was requested

cmr=v1.7.5:reviewer=rhc:subject=update mapping/binding system

This commit was SVN r30909.
2014-03-03 16:46:37 +00:00
Jeff Squyres
baf21ab446 Fix DESTDIR installs for javadocs
Thanks to Orion Poplawski for noticing the issue
(http://www.open-mpi.org/community/lists/devel/2014/03/14263.php).

This commit was SVN r30908.
2014-03-03 16:26:18 +00:00
Mike Dubman
05ee929832 OMPI-MXM: handle multiple calls to add_procs() in MXM
- now add_procs can be called more than once (during MPI_INIT and Inter_Comm_Create)
- adjust MXM to this reality

fixed by Alina, reviewed by Yossi/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30907.
2014-03-03 13:50:37 +00:00
Mike Dubman
33d363e65d OSHMEM: fix fortran binding
based on true story: http://www.open-mpi.org/community/lists/devel/2014/03/14262.php

fixed by Roman, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30906.
2014-03-03 09:58:11 +00:00
Vasily Filipov
f36d50d494 OPENIB BTL/CONNECT: warning fixes caused by r30875.
This commit was SVN r30905.

The following SVN revision numbers were found above:
  r30875 --> open-mpi/ompi@f2014b96e7
2014-03-03 06:41:46 +00:00
Ralph Castain
85770ff782 Remove stale file reference
Refs trac:4322

This commit was SVN r30904.

The following Trac tickets were found above:
  Ticket 4322 --> https://svn.open-mpi.org/trac/ompi/ticket/4322
2014-03-02 03:48:56 +00:00
Oscar Vega-Gisbert
3a31869a58 Authorship of Java bindings
This commit was SVN r30901.
2014-03-01 20:18:05 +00:00
Oscar Vega-Gisbert
4def6c5ae2 Java: avoid setting Status attributes in the C side.
Make File implementation consistent with the rest of the API.

This commit was SVN r30900.
2014-03-01 19:54:36 +00:00
Nathan Hjelm
ab2a42d4e6 Update NEWS for MPI-3 RMA
cmr=v1.7.5:reviewer=rhc

This commit was SVN r30899.
2014-03-01 17:07:31 +00:00
Mike Dubman
1f69e2d588 OSHMEM: fix warn in macro
fixed by Elena, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30897.
2014-03-01 07:54:48 +00:00
Ralph Castain
88b0e0cc6d Allow the user to turn off the oversubscribed-binding warning if overload-allowed has been provided
Refs trac:4317

This commit was SVN r30892.

The following Trac tickets were found above:
  Ticket 4317 --> https://svn.open-mpi.org/trac/ompi/ticket/4317
2014-02-28 17:55:53 +00:00
Jeff Squyres
1bda304a35 Mark the ompi_rte_abort() function as "no return"
This allows compilers to know that the code path(s) where
ompi_rte_abort() is invoked won't return (and therefore won't warn in
certain cases).

cmr=v1.8:reviewer=rhc

This commit was SVN r30891.
2014-02-28 17:45:36 +00:00
Jeff Squyres
3f845edfdd * Prefix the preprocessor macro used to protect the file
* Include opal_stdint.h so that we have uin32_t

cmr=v1.7.5:ticket=trac:4298

This commit was SVN r30890.

The following Trac tickets were found above:
  Ticket 4298 --> https://svn.open-mpi.org/trac/ompi/ticket/4298
2014-02-28 16:56:38 +00:00
Jeff Squyres
f8dbba78a7 Send the BTL-passed message to ompi_rte_abort.
cmr=v1.8:reviewer=rolfv

This commit was SVN r30889.
2014-02-28 16:20:54 +00:00
Ralph Castain
4a645f0342 Add detection of oversubscription with binding requested - if binding requested to core or hwt, warn and do not bind or else we will hurt performance. Also, if no binding directive was given, turn off the default binding
Refs trac:4317

This commit was SVN r30888.

The following Trac tickets were found above:
  Ticket 4317 --> https://svn.open-mpi.org/trac/ompi/ticket/4317
2014-02-28 16:08:52 +00:00
Ralph Castain
8500247c7b Fix the by-obj mapper in the case where slots are not specified, and so we are in a perpetual oversubscribed state
cmr=v1.7.5:reviewer=rhc

This commit was SVN r30887.
2014-02-28 05:21:46 +00:00
Ralph Castain
a4c3d0a5a0 Add some more debug to the by-obj mapper
This commit was SVN r30884.
2014-02-28 02:52:53 +00:00
Tom Naughton
8793560bde + fix abstraction violation (ORTE_process_info => OMPI_process_info)
This commit was SVN r30883.
2014-02-27 23:59:46 +00:00
Jeff Squyres
e819b5a34a Remove the vendor_ids parsing.
We don't use this functionality any more; we use the transport_type
and device name to identify usnic devices.  It's slightly easier
because we can transport_type+name from ibv_device_open() and don't
have to do an additional ibv_query_device() to get its attributes.

Reviewed by Dave Goodell.

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30882.
2014-02-27 21:47:01 +00:00