ports/openmpi
ports/openmpi
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Автор SHA1 Сообщение Дата
Gilles Gouaillardet
0f23037775 coll/base: fix memory allocation in mca_coll_base_alltoall_intra_basic_inplace 2015-10-19 16:47:59 +09:00
KAWASHIMA Takahiro
7fef70c9b8 man: Add MPI_DIST_GRAPH in MPI_TOPO_TEST manpage. 
`MPI_DIST_GRAPH` was added in MPI-2.2.
 2015-10-19 15:24:12 +09:00
KAWASHIMA Takahiro
d3a29e364c man: Change 'MPI ADDRESS KIND' to 'MPI_ADDRESS_KIND'. 
(underscores instead of spaces)
 2015-10-19 15:11:06 +09:00
KAWASHIMA Takahiro
dcd14103d5 man: Remove unnecessary spaces in Fortran syntax. 
Similar lines of other routines have no space.
 2015-10-19 15:04:50 +09:00
KAWASHIMA Takahiro
34c3b5d74d man: Correct the kind of ADDRESS parameter of MPI_GET_ADDRESS. 2015-10-19 15:01:30 +09:00
KAWASHIMA Takahiro
3253a30ab2 man: Remove unnecessary spaces in front of parameters. 2015-10-19 14:48:23 +09:00
KAWASHIMA Takahiro
2226cdb3da man: Correct the routine name of MPI_FILE_IWRITE_SHARED. 2015-10-19 14:44:49 +09:00
KAWASHIMA Takahiro
bffc7b6c8f man: Add man of MPI_Message_{c2f,f2c} and MPI_Op_commutative. 
These routines were added in MPI-2.2 but were missing in OMPI man pages.
 2015-10-19 13:49:40 +09:00
KAWASHIMA Takahiro
9942d5a933 man: MPI_IBARRIER has two output parameters. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
953c95e9bb man: Update description of MPI_IN_PLACE of MPI_Exscan. 
MPI-2.2 added MPI_IN_PLACE support for MPI_Exscan.
 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
5a3b8b34cd man: Remove outdated description. MPI-2.2 is ratified. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
1261b115e4 man: Fix incorrect nroff markups. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
9b96209ac5 man: Fix incorrect C++ binding descriptions. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
ffce87328d man: MPI_Get_version now returns 3.1 instead of 2.1. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
80a0b30be8 man: Correct wrong argument order. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
4bbe86b171 man: Fix a typo of an argument. 2015-10-19 13:46:03 +09:00
KAWASHIMA Takahiro
519ddd9ae9 man: Insert missing error classes & Fix incorrect error codes. 2015-10-19 13:46:02 +09:00
Ralph Castain
363f62a506 Fix singleton operations when running under a SLURM allocation. Sadly, SLURM's PMI will return success even if the PMI server isn't actually available. This leads to erroneous selection of pmix and ess components. So add a further requirement (namely, that we see a job_step envar) to the SLURM pmix components along with some modification of ess selection code to avoid the problem 2015-10-17 20:24:03 -07:00
Nathan Hjelm
7dac5d36e5 bump fortran mpi version 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2015-10-16 11:04:17 -06:00
Nathan Hjelm
467ff3a450 Merge pull request #1024 from hjelmn/mpi_31 
bump mpi version to 3.1
 2015-10-16 09:35:52 -06:00
Howard Pritchard
1ba5157a23 Merge pull request #1034 from hppritcha/topic/lanl_platform_fix 
lanl/platform: fixes to pick up lustre
 2015-10-15 15:18:37 -06:00
Edgar Gabriel
e9be9a1772 Merge pull request #1032 from edgargabriel/pr/macos-sharedfp-sm-fix 
limit the number of bytes used for the semaphore name depending on pl…
 2015-10-15 15:09:44 -05:00
Howard Pritchard
89b9be3732 lanl/platform: fixes to pick up lustre 
Fixes to lanl platform files to pick up lustre header
files, etc. for romio and ompi i/o.

Fixes #1033

Thanks to Jerome Vienne for spotting this.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2015-10-15 14:32:21 -05:00
Jeff Squyres
9fe4ebbea7 Merge pull request #1007 from jsquyres/rfc/init-finalize-updates 
init/finalize: extensions
 2015-10-15 13:55:28 -04:00
Edgar Gabriel
f97655f28e make sure the iov buffer is initialized to zero, otherwise bad things can happen for 0-byte contributions on a process. 2015-10-15 12:46:01 -05:00
Jeff Squyres
a23ab2cfba Merge pull request #1031 from jsquyres/pr/hwloc-1.11.1 
hwloc: upgrade from v1.11.0 to v1.11.1
 2015-10-15 12:52:37 -04:00
Jeff Squyres
40b4d5d74d help-mpi-api.txt: remove now-stale help messages 2015-10-15 12:39:16 -04:00
Jeff Squyres
338257a2f4 man: update man pages for Init*/Finalize* 
Update language surrounding initialization and finalization in
MPI_Init[_thread], MPI_Initialized, MPI_Finalize, and MPI_Finalized.
 2015-10-15 12:39:16 -04:00
Jeff Squyres
f5ad90c920 init/finalize: extensions 
Proposed extensions for Open MPI:

- If MPI_INITLIZED is invoked and MPI is only partially initialized,
  wait until MPI is fully initialized before returning.
- If MPI_FINALIZED is invoked and MPI is only partially finalized,
  wait until MPI is fully finalized before returning.
- If the ompi_mpix_allow_multi_init MCA param is true, allow MPI_INIT
  and MPI_INIT_THREAD to be invoked multiple times without error (MPI
  will be safely initialized only the first time it is invoked).
 2015-10-15 12:39:15 -04:00
Edgar Gabriel
0177918a08 limit the number of bytes used for the semaphore name depending on platform (31 bytes for MacOS, 252 for Linux) 2015-10-15 11:13:45 -05:00
Jeff Squyres
f69364e768 hwloc: upgrade from v1.11.0 to v1.11.1 
Taken from upstream v1.11.1 release.

Fixes open-mpi/ompi#981.
 2015-10-15 08:58:33 -07:00
Nathan Hjelm
341b60dd57 Merge pull request #1029 from kawashima-fj/pr/ob1-fin-memory-leak 
pml/ob1: Fix a memory leak regarding pending FIN control messages.
 2015-10-15 07:55:52 -06:00
Jeff Squyres
888b5b5db1 Merge pull request #1030 from kawashima-fj/pr/fortran-weak-symbol-fix 
fortran/mpif-h: Insert missing weak symbols & Fix incorrect symbol names.
 2015-10-15 06:36:08 -04:00
KAWASHIMA Takahiro
66a8bc9e45 fortran/mpif-h: Insert missing weak symbols & Fix incorrect symbol names. 2015-10-15 11:58:41 +09:00
KAWASHIMA Takahiro
4e56505202 pml/ob1: Fix a memory leak regarding pending FIN control messages. 
Once a FIN control message is appended to the pending list,
the ob1 PML attempts to send the FIN again in the                               `mca_pml_ob1_process_pending_packets` function.
But if the PML failed to sent the FIN again, the `mca_pml_ob1_send_fin`
function creates a new `mca_pml_ob1_pckt_pending_t` object and the
old object is not retured to the free list.
 2015-10-15 11:15:03 +09:00
Jeff Squyres
aceb1ebb47 Merge pull request #1026 from hjelmn/static_mutex 
opal static mutex initializers
 2015-10-14 22:10:51 -04:00
Jeff Squyres
a7e7ecd42d opal_progress_thread: fix stale comment 2015-10-14 18:25:31 -07:00
Jeff Squyres
c9c0512d23 Merge pull request #1027 from jsquyres/pr/add-missing-mpi-aint-mpi-f08 
Fortran: add missing MPI_AINT in mpi_f08 module
 2015-10-14 21:24:41 -04:00
Jeff Squyres
2b9c9f3093 Fortran: add missing MPI_AINT in mpi_f08 module 2015-10-14 17:32:01 -07:00
Jeff Squyres
8307330e8a Merge pull request #989 from jsquyres/pr/friendly-message-when-dynamics-disabled 
Print friendly message when dynamics disabled
 2015-10-14 19:52:52 -04:00
Nathan Hjelm
7f7ff8d851 mpit: use opal static mutex initializer 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2015-10-14 16:08:42 -06:00
Nathan Hjelm
039c7dbcd6 opal/mutex: add static mutex initializers 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2015-10-14 16:08:41 -06:00
Jeff Squyres
889d80a659 mxm/yalla: disable MPI dynamic process functionality 
Disable the MPI dynamic process functionality when these components
are selected to be used.
 2015-10-14 13:42:56 -07:00
Jeff Squyres
ac25505e03 mpi: infrastructure to gracefully disable MPI dyn procs 
Add ompi_mpi_dynamics_disable() function to disable MPI dynamic
process functionality (i.e., such that if MPI_COMM_SPAWN/etc. are
invoked, you'll get a show_help error explaining that MPI dynamic
process functionality is disabled in this environment -- instead of a
potentially-cryptic network or hardware error).

Fixes #984
 2015-10-14 13:42:56 -07:00
Nathan Hjelm
caa6b2ef00 Merge pull request #1025 from hjelmn/osc_rdma_fixes 
osc/rdma: fix segmentation fault when running 1 ppn
 2015-10-14 13:37:47 -06:00
Nathan Hjelm
e11f014c6e osc/rdma: fix segmentation fault when running 1 ppn 
This commit fixes an issue identified by @rolfv. The local peer was
not being correctly initialized when running with a single process on
a node.

This fixes open-mpi/ompi#1010

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2015-10-14 12:40:52 -06:00
Howard Pritchard
3521a0f9ff Merge pull request #1016 from hppritcha/topic/fix_issue_1005 
btl/ugni: fix very poor aries bw problem
 2015-10-14 10:10:28 -06:00
Nathan Hjelm
06dd9ec317 bump mpi version to 3.1 
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2015-10-14 09:52:30 -06:00
Jeff Squyres
5d97d7b5d5 Merge pull request #1017 from jsquyres/pr/fix-cr-exits 
dynamics: fix OPAL_CR_EXIT_LIBRARY()
 2015-10-14 05:45:05 -04:00
Howard Pritchard
eaba98ce5d btl/ugni: fix very poor aries bw problem 
The handling of RDMA get alignment in ugni BTL for Aries
(cray xc) was wrong, resulting in very poor bandwidth
for ugni BTL on aries.

Verified using osu_bw now gives sensible bandwidth on
Aries.

Fixes #1005

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2015-10-13 16:01:17 -05:00