ports/openmpi
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Автор SHA1 Сообщение Дата
Gilles Gouaillardet
0bd765eddd fix NBC_Copy for legitimate zero size messages 
this fixes a regression from open-mpi/ompi@9a70765f27
 2015-06-22 09:51:25 +09:00
Jeff Squyres
ec44a25070 README: clarify OMPI's same-version requirements 
Clarify that Open MPI requires the exact same version number in all
parts of an Open MPI / OSHMEM job for it to work properly.
 2015-06-19 13:32:18 -07:00
Jeff Squyres
e9b59d8484 make_dist_tarball: don't make "o" writable 
We only need "ug" writable (so that we can delete stuff at the end).
No need to make "o" writable.
 2015-06-19 12:26:12 -07:00
Jeff Squyres
3ad89f16b8 openmpi-release.sh: haven't used "sowing" in years 2015-06-19 12:26:12 -07:00
Edgar Gabriel
3fcb88a727 Merge pull request #646 from edgargabriel/pr/non-blocking-coll 
Pr/non blocking coll
 2015-06-19 07:46:28 +02:00
rhc54
5d38283c7f Merge pull request #647 from rhc54/topic/hangs 
Ensure we properly commit suicide if/when we lose connection to the daemon.
 2015-06-18 10:25:07 -07:00
Ralph Castain
cc9b416ab3 Ensure we properly commit suicide if/when we lose connection to the daemon. There are multiple paths by which a lost daemon can be reported, and so a race condition exists in the pmix support. Our MPI layer wants the ability to determine the response to the failure, and so it will call down to the RTE with any abort request. This comes down to the pmix layer as a "pmix_abort" command, which involves communicating the request to the daemon - who is gone. Sadly, the pmix component may not know that just yet, and so we hang. 
So add a brief timer event to kick us out of the communication. The precise amount of time we should wait is somewhat TBD, but set something short for now and we can adjust.
 2015-06-18 09:45:52 -07:00
Edgar Gabriel
dedeee9771 finishing the changes for the non-blocking and split cpllective I/O operations. Everything except for the 
interface changes to the io framework is done.
 2015-06-18 06:22:41 -05:00
Edgar Gabriel
3b11a8b61c making the current work compile. 2015-06-18 05:56:51 -05:00
Edgar Gabriel
cc219281ba checkpoint of the current work, since I need to resync wioth master to fix the compilation problems 2015-06-18 05:20:07 -05:00
Edgar Gabriel
100515e321 remove split collective interfaces from fcoll and their fake implemenations. Not required anymore 2015-06-18 05:20:07 -05:00
Edgar Gabriel
19cac73a9b first part of the changes trequired to support non-blocking colelctive io operations 2015-06-18 05:20:07 -05:00
Ralph Castain
706884652f Silence Coverity warning about failing to check return code 2015-06-17 19:24:51 -07:00
rhc54
e08ba4860f Merge pull request #645 from rhc54/topic/binding 
Correct the way we handle binding to objects during comm_spawn
 2015-06-17 10:09:23 -07:00
Ralph Castain
869b2891c4 When doing comm-spawn, track the last object we bound to and ensure that we start the next job on the next object so we avoid overload situations when they aren't necessary 2015-06-17 09:20:08 -07:00
Jeff Squyres
8ab2b11f88 btl_openib.c: fix another compiler warning 
Remove this unused variable
 2015-06-17 09:00:12 -07:00
Jeff Squyres
f688289aaf btl_openib.c: fix compiler warning 
This return code is not used; tell the compiler we're not going to
use it.
 2015-06-17 08:56:56 -07:00
Jeff Squyres
097b48d521 mca_base_component_respository.c: fix compiler warning 
This function is only used in the DL case -- it can be #if'ed out if
we're not compiling with DL support to avoid a compiler warning about
defined-but-not-used.
 2015-06-17 08:54:59 -07:00
Jeff Squyres
dfa36197ea usnic/Makefile.am: ensure static builds include -lfabric 2015-06-17 08:15:29 -07:00
Gilles Gouaillardet
2cef2d0fe6 opal/memory: silence a warning 
as reported by Coverity with CID 71663
 2015-06-17 11:17:55 +09:00
Gilles Gouaillardet
ec679b3fc2 orte/orted: fix misc memory leaks 2015-06-17 11:17:55 +09:00
Gilles Gouaillardet
b72e9288bc rmaps: fix a misc memory leak 
as reported by Coverity with CID 1269887
 2015-06-17 11:17:55 +09:00
Gilles Gouaillardet
27b4727fcf orte/orted: fix misc memory leak 
as reported by Coverity with CID 743448
 2015-06-17 11:17:55 +09:00
Gilles Gouaillardet
ac5921d7da orte/util: fix misc memory leak 
as reported by Coverity with CID 1196738-1196739
 2015-06-17 11:17:55 +09:00
Gilles Gouaillardet
e77d3057d6 orte-submit: fix a misc memory leak 
as reported by Coverity with CID 710651
 2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
67638690ea orte/util: fix a misc memory leak 
as reported by Coverity with CID 710652
 2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
a43abceb88 fix dfs misc memory leaks 
as reported by Coverity with CIDs 739887, 747706, 1196707-1196709
 2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
0f08070a1c ompio: fix misc memory leaks 
as identified by Coverity with CIDs 72147-72149, 731275 and 1269872
 2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
58d1b3f4d0 opal_os_dirpath_create: fix TOCTOU 
as reported by Coverity with CID 70396
 2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
de66447ebb opal_cmd_line_get_usage_msg: silence warning 
as reported by Coverity with CID 1269967
 2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
f2f66e6e63 opal_daemon_init: silence warning 
as reported by Coverity with CID 710642
 2015-06-17 11:17:53 +09:00
Gilles Gouaillardet
8427e87ee9 opal_argv_delete: silence warning 
as reported by Coverity with CID 71914
 2015-06-17 11:17:53 +09:00
Gilles Gouaillardet
d9c490cf9f refactor opal_bitmap_get_string 
make it more efficient and fix CID 71992 (dead code)
 2015-06-17 11:17:53 +09:00
Gilles Gouaillardet
0f17cdfc57 fcoll: fix misc memory leaks 
as reported by Coverity with CIDs 72293,72294 and 1269894
 2015-06-17 11:17:52 +09:00
Nathan Hjelm
c33b786dd9 Merge pull request #620 from hjelmn/ompi_coverity 
ompi coverity fixes
 2015-06-16 06:10:40 -06:00
rhc54
9a8bda0b72 Merge pull request #637 from jithinjosepkl/pr/pml-cm-opt 
pml-cm bug fixes
 2015-06-15 19:25:09 -07:00
rhc54
ea78f8226d Merge pull request #631 from jsquyres/pr/remove-embedded-libfabric 
remove embedded libfabric
 2015-06-15 18:14:33 -07:00
Jithin Jose
7ccde09a09 Do opal_convertor_copy_and_prepare_for_send for buffered send mode as 
MCA_PML_CM_HVY_SEND_REQUEST_BSEND_ALLOC calls opal_convertor_pack
directly.

Signed-off-by: Jithin Jose <jithin.jose@intel.com>
 2015-06-15 17:12:50 -07:00
Howard Pritchard
7cce0159dc Merge pull request #643 from hppritcha/topic/java_common_symbols 
mpi/java: suppress common symbols warning
 2015-06-15 18:12:40 -06:00
Howard Pritchard
224f97b009 mpi/java: suppress common symbols warning 
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2015-06-15 17:13:40 -06:00
Jeff Squyres
cc66745e7a mtl/ofi: convert to use external libfabric 
Use the new OPAL_CHECK_LIBFABRIC macro.
 2015-06-15 15:17:06 -07:00
Jeff Squyres
44e7646de9 usnic/configure.m4: convert to use external libfabric 
Use the new OPAL_CHECK_LIBFABRIC macro.
 2015-06-15 15:17:06 -07:00
Jeff Squyres
0b343fa599 opal_check_libfabric.m4: add libfabric m4 macro 
Similar to other m4 macros checking for the existence / usability of
external libraries.
 2015-06-15 15:17:05 -07:00
Jeff Squyres
3e1b85ceb3 libfabric: remove embedded libfabric 
OMPI now only builds against external libfabric installations.
 2015-06-15 15:17:05 -07:00
Jeff Squyres
c74ab51dd4 opal/mca/dl/dl.h: fix the #ifndef/#define name 
Thanks to Scott Atchley for noticing the name mismatch.
 2015-06-15 13:08:57 -07:00
Gilles Gouaillardet
ee3a1da28a pml/ob1:mca_pml_ob1_recv_request_put_frag silence a warning 
proc local variable is used only in heterogeneous mode
 2015-06-15 10:00:53 +09:00
rhc54
adbff46a13 Merge pull request #642 from rhc54/topic/hwloc 
Update hwloc to 1.11.0
 2015-06-13 12:09:58 -07:00
Ralph Castain
ff92781ec4 Replace hwloc191 with hwloc1110 
Fix hwloc compile. Ignore LAMA mapper due to deprecated hwloc functions
 2015-06-13 10:11:45 -07:00
Jeff Squyres
4384131e65 openib: minor style and defensive programming fixes 
Minor comment/whitespace fixes.  Also some minor logic changes that
are mainly for defensive programming purposes (i.e., ensure to always
set malloc_hook_set to true or false, and then check it before we try
to actually invoke it).
 2015-06-12 20:11:47 -07:00
Jeff Squyres
2f137ff151 openib: reset memalign threshhold properly 
Now that open-mpi/ompi#638 is fixed, reset the openib BTL memalign
threshhold properly.

This effectively re-instates commit
open-mpi/ompi@ce915b5757.
 2015-06-12 20:11:47 -07:00