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7518 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
0a32ea87e7 Remove unneeded EXTRA_DIST
This commit was SVN r32343.
2014-07-29 16:54:11 +00:00
George Bosilca
815d7bc846 Fix the example to use the new 2_2 topo component.
This commit was SVN r32338.
2014-07-29 07:00:01 +00:00
George Bosilca
78eae6108a Add an example on how to handle topologies.
This commit was SVN r32337.
2014-07-29 05:05:59 +00:00
Nathan Hjelm
1407c1f501 Remove RML code from common/sm
The only user of this code was coll/sm. I implemented a basic replacement
for the removed code. This gets the trunk compiling again with
--disable-dlopen.

This commit was SVN r32333.
2014-07-28 22:00:12 +00:00
Nathan Hjelm
0f15afa4d9 Fix typo in psm mtl
This commit was SVN r32332.
2014-07-28 22:00:03 +00:00
Nathan Hjelm
603ba71b0d Ignore components broken by the BTL move.
common/ofacm is only used by the iboffload code in ompi. This code does
not currently work so it is safe to ignore these components until it is
fixed.

This commit was SVN r32331.
2014-07-28 21:24:18 +00:00
Ryan Grant
caa10a5faf Portals fixes after latest move
This commit was SVN r32330.
2014-07-28 19:25:03 +00:00
Ralph Castain
bcade48e27 Move the opal_process_info initialization to the right place - all that info is known (for ourselves only) immediately after rte_init.
This commit was SVN r32329.
2014-07-28 19:19:35 +00:00
George Bosilca
a3feb627cf Move some of the ompi_process_info down in OPAL.
This commit was SVN r32324.
2014-07-26 21:43:34 +00:00
Ralph Castain
552c9ca5a0 George did the work and deserves all the credit for it. Ralph did the merge, and deserves whatever blame results from errors in it :-)
WHAT:    Open our low-level communication infrastructure by moving all necessary components (btl/rcache/allocator/mpool) down in OPAL

All the components required for inter-process communications are currently deeply integrated in the OMPI layer. Several groups/institutions have express interest in having a more generic communication infrastructure, without all the OMPI layer dependencies.  This communication layer should be made available at a different software level, available to all layers in the Open MPI software stack. As an example, our ORTE layer could replace the current OOB and instead use the BTL directly, gaining access to more reactive network interfaces than TCP.  Similarly, external software libraries could take advantage of our highly optimized AM (active message) communication layer for their own purpose.  UTK with support from Sandia, developped a version of Open MPI where the entire communication infrastucture has been moved down to OPAL (btl/rcache/allocator/mpool). Most of the moved components have been updated to match the new schema, with few exceptions (mainly BTLs where I have no way of compiling/testing them). Thus, the completion of this RFC is tied to being able to completing this move for all BTLs. For this we need help from the rest of the Open MPI community, especially those supporting some of the BTLs.  A non-exhaustive list of BTLs that qualify here is: mx, portals4, scif, udapl, ugni, usnic.

This commit was SVN r32317.
2014-07-26 00:47:28 +00:00
Jeff Squyres
0ab4eaa7d3 usnic: revert r32315 because the BTL move to opal is ongoing
Let's not make the move to OPAL any harder than it has to be; this
commit can wait until after the BTL move.

This commit was SVN r32316.

The following SVN revision numbers were found above:
  r32315 --> open-mpi/ompi@7b7ed8ed97
2014-07-25 14:17:20 +00:00
Jeff Squyres
7b7ed8ed97 usnic: minor cleanup / consolidation
CMR'ing just to (try to) keep the differences between trunk and v1.8
branch (somewhat) small.

Reviewed by Dave Goodell

cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32315.
2014-07-25 14:11:54 +00:00
Jeff Squyres
6ae45b34fc usnic: check connectivity on first communication to a peer
Previously, we were only checking connectivity upon first ''send'' to
a peer.  But this ignores the case where the first communication to a
peer is actually an ACK -- i.e., we successfully received something
from the peer and we need to send an ACK back.  So we need to verify
that the ACK will actually get there.

Specifically, certain asymmetric routing cases can lead to a hang if
we don't check the connectivity in both directions.  E.g., if the
sender is able to get traffic to the receiver, but the receiver is
unable to get traffic back to the sender because it made a different
routing decision than the sender.

In this case, the connectivity checker from the sender could succeed
(because the connectivity checker will ACK along the same path in
which the ping was received), but sending a BTL ACK could fail
(because the BTL ACK will be sent back along the path chosen by the
graph algorithm, which, in an erroneous asymmetric routing scenario,
may be different/wrong).

Hence, we want to trigger the connectivity checker at the first
communication from A->B, which may either be a BTL send or an ACK.

Reviewed by Dave Goodell.

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r32309.
2014-07-24 21:32:56 +00:00
Bert Wesarg
3e34812a0d Changes to VT/OTF:
Ensure that target directories exists before creating symlinks.

cmr=v1.8.2:reviewer=jsquyres

Thanks Jeff to step up as an reviewer.

This commit was SVN r32305.
2014-07-24 19:06:43 +00:00
Rolf vandeVaart
9bc8fbaefd Create new error message so we can better pinpoint where an error occurs.
This commit was SVN r32303.
2014-07-24 15:18:55 +00:00
Rolf vandeVaart
3f703afb97 Fix CUDA registration where we run out of memory being allocated.
This commit was SVN r32297.
2014-07-23 21:10:17 +00:00
Todd Kordenbrock
42a871efd4 This commit fixes trac:4662 - "Portals4/MTL hangs in c_get_accumulate test".
- Portals4/OSC was unable to acquire an exclusive lock due to an invalid
local address in the atomic operation.  This caused the reported hang.
- After fixing the hang, the test continued to fail because
ompi_datatype_is_contiguous_memory_layout() reports that MPI_EMPTY (the
origin datatype) is noncontiguous and Portals4/OSC does not support
noncontiguous datatypes at this time.  However, in this case the origin
count is zero so contiguous/noncontiguous is irrelevant.  Now we skip
the contiguous check if the count is zero.

cmr=v1.8.3:reviewer=regrant:subject=Fix for "Portals4/MTL hangs in c_get_accumulate test"

This commit was SVN r32295.

The following Trac tickets were found above:
  Ticket 4662 --> https://svn.open-mpi.org/trac/ompi/ticket/4662
2014-07-23 19:13:07 +00:00
Edgar Gabriel
d4f83ab929 clean up of the MCA parameters of the fcoll framework. Most parameters are now
set/retrieved in ompio instead of the fcoll components.

This commit was SVN r32294.
2014-07-23 19:03:14 +00:00
Jeff Squyres
8e80480cbc fortran: don't use optional params in the ompi/pompi interfaces
Fix a copy-n-paste error: the ompi/pompi interfaces should not have
optional ierror arguments.  Optional ierror arguments are only used in
the MPI_<foo> interfaces.  The ompi/pompi interfaces are the actual
underlying routines (in C, incidentally, which is why they're declared
as BIND(C)), and do not have optional ierror arguments.

Also fix a typo in the BIND(C) name for pompi_win_shared_query_f().

cmr=v1.8.2:reviewer=ggouaillardet

This commit was SVN r32287.
2014-07-22 21:51:29 +00:00
Jeff Squyres
4da3c85b54 fortran: revert Absoft-based fixes
Rever r32246, r32254, and 32255 -- they were fixing side-effects of
the real bug.  Real fix coming after this one.

This commit was SVN r32286.

The following SVN revision numbers were found above:
  r32246 --> open-mpi/ompi@08d2a1a48d
  r32254 --> open-mpi/ompi@232d4dbb7b
2014-07-22 21:49:22 +00:00
Jeff Squyres
ac2621debf usnic: show_help if we can't create the connectivity map file
QA ran across the case where the user can't write to the target
directory for the connectivity map file.  In this case, we silently
continued.  They requested that we at least warn in this case.

Fixes Cisco bug CSCup62821

Reviewed by Dave Goodell

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r32283.
2014-07-22 20:50:59 +00:00
Devendar Bureddy
74852b4d21 HCOLL: fix misplaced hcoll_init return value check.
cmr=v1.8.2:reviewer=jladd

This commit was SVN r32282.
2014-07-22 18:47:34 +00:00
Rolf vandeVaart
63d6a08283 Fix set-but-unused-warning noticed by jsquyres.
cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r32281.
2014-07-22 18:37:40 +00:00
Howard Pritchard
828a4a29b7 Subject: fix regression in ugni btl eager get path
Description:
This mod fixes a regression in the ugni btl eager get
path introduced in changeset 32196.
References:4800
Closes:4800

cmr=v1.8.2:reviewer=hjelmn

This commit was SVN r32264.
2014-07-22 15:42:11 +00:00
Rolf vandeVaart
8778418da2 Remove some debug #ifdefs (oops). Other lock support.
This commit was SVN r32263.
2014-07-22 02:09:06 +00:00
Rolf vandeVaart
1a61dd3078 Add some more locks where needed.
This commit was SVN r32262.
2014-07-22 00:29:57 +00:00
Rolf vandeVaart
7897d2a828 Improve verbose message which says which device:ports are being used. Also move where message is generated.
This commit was SVN r32261.
2014-07-21 20:38:52 +00:00
Jeff Squyres
da18eb1b8b common/verbs: fix usnic detection
The logic was mishandling the case of a newer kernel and an older
libusnic_verbs.  Simplify usnic_transport() to return constants in the
2 known cases (not a usNIC device and the TRANSPORT_USNIC_UDP case),
and call the magic probe in all other cases.

Reviewed-by: Dave Goodell <dgoodell@cisco.com>

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r32260.
2014-07-21 19:52:29 +00:00
Jeff Squyres
b6075ea775 usnic: explicitly handle case when both endpoints are NULL
If we don't explicitly declare that (a == NULL && b == NULL) is
equivalent to qsort, we could end up with wonky sorting order.  I.e.,
it's *possible* that some NULLs could end up in the middle of the
array.

Regardless of whether it will ever happen in practice, it makes the
code more clear to also handle the "both are NULL" case.

Also fix the 2-spacing indents.

Reviewed by Dave Goodell.

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r32259.
2014-07-21 16:22:48 +00:00
Rolf vandeVaart
947a4e14b4 Add a lock and clean up handling of some error conditions,
This commit was SVN r32258.
2014-07-17 19:33:10 +00:00
Mike Dubman
da8df859b3 MXM: use builk connection establishment API
fixed by Vasily, reviewed by Yossi/Miked

cmr=v1.8.2:reviwer=ompi-rm1.8

This commit was SVN r32256.
2014-07-17 08:35:55 +00:00
Gilles Gouaillardet
a7bfd6e766 fortran: fix compile issue with ABSoft compilers
one more fix ...

cmr=v1.8.2:ticket=trac:4792

This commit was SVN r32255.

The following Trac tickets were found above:
  Ticket 4792 --> https://svn.open-mpi.org/trac/ompi/ticket/4792
2014-07-17 07:38:13 +00:00
Gilles Gouaillardet
232d4dbb7b fortran: fix compile issue with ABSoft compilers
Simplify and fix the r32246

cmr=v1.8.2:ticket=trac:4792

This commit was SVN r32254.

The following SVN revision numbers were found above:
  r32246 --> open-mpi/ompi@08d2a1a48d

The following Trac tickets were found above:
  Ticket 4792 --> https://svn.open-mpi.org/trac/ompi/ticket/4792
2014-07-17 06:00:32 +00:00
Rolf vandeVaart
26e3282a18 One more minor movement for easier reading. No functional change.
This commit was SVN r32252.
2014-07-16 20:59:07 +00:00
Rolf vandeVaart
c332ca75ff Change function name for clarity.
This commit was SVN r32251.
2014-07-16 20:46:10 +00:00
Rolf vandeVaart
a2dd4ca226 Remove hack that is no longer needed.
This commit was SVN r32250.
2014-07-16 14:00:17 +00:00
Rolf vandeVaart
61821adf2f Fix self deadlock bugs.
This commit was SVN r32249.
2014-07-15 20:50:41 +00:00
Gilles Gouaillardet
08d2a1a48d fortran: fix compile issue with ABSoft compilers
ABSoft compilers cannot compile a fortran subroutine
with the BIND(C, NAME="name") modifier *and* argument(s)
with the OPTIONAL modifier

This patch detects this unsupported feature and use
adhoc wrappers if it is missing

cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r32246.
2014-07-15 10:41:11 +00:00
Gilles Gouaillardet
fd7bfc2221 mpi: remove automatically generated file from the tarball
cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r32244.
2014-07-15 07:52:13 +00:00
Gilles Gouaillardet
fd71d81e5d vt: remove automatically generated files from the tarball
cmr=v1.8.2:reviewer=jurenz

This commit was SVN r32243.
2014-07-15 07:51:19 +00:00
Ralph Castain
6c5e592785 Revert r32222, r32210, and r32203 as they created a problem when daemon collectives did not involve app procs on every node. Instead, modify the ompi/mca/rte/orte/rte_orte.h to add a new function that allows apps to request new daemon collective ids for use in barrier and modex operations. This will only appear in ORTE-based installations, but it is only being used by a couple of researchers at the moment.
Update the orte/test/mpi/coll_test.c test to show the revised example.

This commit was SVN r32234.

The following SVN revision numbers were found above:
  r32203 --> open-mpi/ompi@a523dba41d
  r32210 --> open-mpi/ompi@2ce11ed5c4
  r32222 --> open-mpi/ompi@d55f16db50
2014-07-15 03:48:00 +00:00
Nathan Hjelm
f960e4273e Fix typo in r32196
The wrong descriptor field was used when calculating the size received when
using the RDMA rendevous protcol.

This commit was SVN r32232.

The following SVN revision numbers were found above:
  r32196 --> open-mpi/ompi@a14e0f10d4
2014-07-14 21:00:53 +00:00
Ralph Castain
3d1b32a2c6 Silence warning
cmr=v1.8.2:reviewer=hjelmn

This commit was SVN r32231.
2014-07-14 19:27:30 +00:00
Matthias Jurenz
2d01dd04d4 Reverted r32225. r29732 already fixes the automake issue in the trunk
This commit was SVN r32230.

The following SVN revision numbers were found above:
  r29732 --> open-mpi/ompi@3923ee89ec
  r32225 --> open-mpi/ompi@0db23b0210
2014-07-14 11:21:38 +00:00
Mike Dubman
0db23b0210 BUILD: support new automake
new automake requires subdirs-object directive, to resolve this:

09:43:37 automake: warning: possible forward-incompatibility.
09:43:37 automake: At least a source file is in a subdirectory, but the 'subdir-objects'
09:43:37 automake: automake option hasn't been enabled.  For now, the corresponding output
09:43:37 automake: object file(s) will be placed in the top-level directory.  However,
09:43:37 automake: this behaviour will change in future Automake versions: they will
09:43:37 automake: unconditionally cause object files to be placed in the same subdirectory
09:43:37 automake: of the corresponding sources.
09:43:37 automake: You are advised to start using 'subdir-objects' option throughout your
09:43:37 automake: project, to avoid future incompatibilities.
09:43:37 tools/otfmerge/Makefile.common:13: warning: source file '$(OTFMERGESRCDIR)/otfmerge.c' is in a subdirectory,
09:43:37 tools/otfmerge/Makefile.common:13: but option 'subdir-objects' is disabled

cmr=v1.8.2:reviewer=ompi-rm1.8

This commit was SVN r32225.
2014-07-12 12:38:15 +00:00
Mike Dubman
e342a11c2e opal envlist mca: implement Jeff`s quibbles
fixed by Elena, reviewed by Miked

This commit was SVN r32216.
2014-07-11 07:23:20 +00:00
Gilles Gouaillardet
ee9098e2ee Fix use-mpi-trk/Makefile.am
Always include into the tarball (aka 'make dist') :
 - mpi-f90-interfaces.h
 - mpi-f90-cptr-interfaces.F90

cmr=v1.8.2:ticket=trac:4736

This commit was SVN r32215.

The following Trac tickets were found above:
  Ticket 4736 --> https://svn.open-mpi.org/trac/ompi/ticket/4736
2014-07-11 05:05:19 +00:00
Gilles Gouaillardet
77184b5c4c Fix a cornercase with MPI_PROC_NULL persistent requests
Handle OMPI_REQUEST_NOOP in MPI_Startall rather than PML

cmr=v1.8.2:reviewer=bosilca:ticket=4764

This commit was SVN r32213.

The following Trac tickets were found above:
  Ticket 4764 --> https://svn.open-mpi.org/trac/ompi/ticket/4764
2014-07-11 04:37:01 +00:00
Gilles Gouaillardet
d3ff5d77e1 scif: Fix compile error related to r32196
This commit was SVN r32212.

The following SVN revision numbers were found above:
  r32196 --> open-mpi/ompi@a14e0f10d4
2014-07-11 04:32:25 +00:00
Jeff Squyres
7384ee9e44 usnic: handle NULL endpoints in connectivity map
The connectivity map output routine needs to handle the case where
entries in the endpoints array are NULL (e.g., if one process has 2
endpoints and another process has only 1 endpoint).

Fixes Cisco bug CSCup83649.

cmr=v1.8.2

This commit was SVN r32211.
2014-07-11 00:43:45 +00:00