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Автор SHA1 Сообщение Дата
Mike Dubman
33d363e65d OSHMEM: fix fortran binding
based on true story: http://www.open-mpi.org/community/lists/devel/2014/03/14262.php

fixed by Roman, reviewed by Igor/Mike

cmr=v1.7.5:reviewer=ompi-rm1.7

This commit was SVN r30906.
2014-03-03 09:58:11 +00:00
Jeff Squyres
bda840df49 Fixes trac:4205: ensure sizeof(MPI_Count) <= sizeof(size_t)
- Move the ptrdiff_t tests up higher in configure.ac to be with the
  rest of the type tests.
- Create new OMPI_FIND_MPI_AINT_COUNT_OFFSET for finding the
  corresponding types of MPI_Aint, MPI_Count, and MPI_Offset.
  Consolidate all the old C and Fortran tests into this new macro (and
  .m4 file).
- Fix Fortran MPI_*_KIND tests that incorrectly keyed off assumed
  types (e.g., int64_t) rather than whatever the corresponding C
  MPI_Aint, MPI_Count, MPI_Offset types turned out to be.
- Add new logic to ensure that sizeof(MPI_Count) <= sizeof(size_t),
  because our entire PML, BTL, and convertor infrastructure requires
  this.  As a side effect, just like MPI_Offset the same type of
  MPI_Count (because MPI_Count has to be able to hold an MPI_Offset,
  so we can't let MPI_Offset be larger than a MPI_Count).

This commit was SVN r30776.

The following Trac tickets were found above:
  Ticket 4205 --> https://svn.open-mpi.org/trac/ompi/ticket/4205
2014-02-19 23:04:34 +00:00
Jeff Squyres
ef4e65bd2c Very small configure.ac reorganization:
* Move pid_t size check up to be with the other size checks
 * Move the MPI profiling setup to be below the Java setup

This commit was SVN r30574.
2014-02-06 11:42:34 +00:00
Jeff Squyres
b7d10b3499 Remove some unused AC_DEFINE's, and also remove a redundant AC_DEFINE
This commit was SVN r30564.
2014-02-05 12:24:02 +00:00
Nathan Hjelm
5c35b5ba19 Fix wrapper ldflags.
cmr=v1.7.4:reviewer=jsquyres

This commit was SVN r30555.
2014-02-04 19:44:08 +00:00
Mike Dubman
7e5031374e OSHMEM: Apply Jeff`s comments to fortran configure logic
Refs trac:3763

This commit was SVN r30530.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-02-03 09:47:56 +00:00
Ralph Castain
edc760434c My bad - do not include any references to "orcm" in configure.ac. However, do properly set the AM_CONDITIONALs based on projects being enabled/disabled
This commit was SVN r30501.
2014-01-30 16:44:57 +00:00
Ralph Castain
e1f0af85aa Consider the disable_foo settings when setting the project AM_CONDITIONAL values to ensure the Makefile's get setup properly. This enables one to do "make check" in the test area, for example, when a particular project has been disabled.
This commit was SVN r30498.
2014-01-30 11:16:29 +00:00
Ralph Castain
09267731f8 Add another header to be checked
cmr=v1.7.5:reviewer=rhc:subject=Add usock oob support

This commit was SVN r30432.
2014-01-26 21:05:45 +00:00
Mike Dubman
59d4bb662c OSHMEM: rework fortran support detection
fix the case, to enable oshmem-fortran when "with-shmem" was specified and "ompi-fortran" was enabled and happy.

fixed by Roman, reviewed by Miked

Refs trac:3763

This commit was SVN r30391.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-23 07:49:13 +00:00
Mike Dubman
34b3718042 revert, need rework.
This commit was SVN r30351.
2014-01-21 17:56:01 +00:00
Mike Dubman
37343574e0 OSHMEM: fix fortran binding
The check to enable shmem fortran was too early, MPI can disable fortran but SHMEM fortran check was already done.
Refs trac:3763

This commit was SVN r30340.

The following Trac tickets were found above:
  Ticket 3763 --> https://svn.open-mpi.org/trac/ompi/ticket/3763
2014-01-21 09:20:51 +00:00
Ralph Castain
657796f9e0 Revert r30327 - turns out it isn't quite right just yet. :-(
Closes trac:4138

This commit was SVN r30328.

The following SVN revision numbers were found above:
  r30327 --> open-mpi/ompi@87d5f86025

The following Trac tickets were found above:
  Ticket 4138 --> https://svn.open-mpi.org/trac/ompi/ticket/4138
2014-01-18 23:38:39 +00:00
Ralph Castain
87d5f86025 Enable use of unix domain sockets for local OOB communications, thereby removing the requirement for an active network interface when running strictly on a single node. Update the overall OOB system to support cross-transport movement of messages so that the OOB can move a received message to another transport for transmission.
cmr=v1.7.5:reviewer=jsquyres:subject=Enable use of unix domain sockets for local OOB communications

This commit was SVN r30327.
2014-01-18 21:36:49 +00:00
Mike Dubman
6fe7b61a53 OSHMEM: remove unused var
fix for http://www.open-mpi.org/community/lists/devel/2014/01/13779.php
fixed by Roman, reviewed by Igor

cmr=v1.7.4:reviewer=ompi-rm1.7

This commit was SVN r30305.
2014-01-17 08:34:52 +00:00
Jeff Squyres
31093f777b Remove an optimization to not bother setting up the C++ compiler if we
weren't building the MPI C++ bindings because this causes "CXX=no" to
be passed to the mpicxx wrapper compiler.  

Unfortunately, this optimization was brought to the v1.7 branch, and
therefore if you --disable-mpi-cxx on the v1.7 branch, the same
problem will happen.  So this needs to be CMR'ed to v1.7 as well.

Submitted by Jeff, reviewed by Brian.  RM approved by Brian.

Fixes trac:4120.

cmr=v1.7.4:reviewer=ompi-gk1.7:subject=Fix mpicxx wrapper compiler

This commit was SVN r30302.

The following Trac tickets were found above:
  Ticket 4120 --> https://svn.open-mpi.org/trac/ompi/ticket/4120
2014-01-16 21:30:17 +00:00
Jeff Squyres
9950471df7 Fixes for opal_path_nfs():
* Fix some typos in macro names.
 * Add case for OS's that have statfs() but no struct statfs (!).
 * Add case for NetBSD with struct statvfs.f_fstypename.

Many thanks to Paul Hargrove who developed the majority of this patch.

Reviewed by Jeff Squyres.

cmr=v1.7.4:reviewer=ompi-rm1.7

This commit was SVN r30255.
2014-01-11 01:07:10 +00:00
Jeff Squyres
c67c8e8187 Make the use of statfs()/statvfs() be more robust.
As noted by Paul Hargrove, the #if's surrounding the use of statfs()
and statvfs() in opal/util/path.c have apparently gotten stale (e.g.,
modern flavors of *BSD OSs no longer define __BSD).  Changes:

 * Add statfs and statvfs to the AC_CHECK_FUNCS in configure.ac
 * Add a sanity check to ensure that we have at least one of statfs()
   or statvfs().  Add a similar sanity check in opal/util/path.c, just
   as defensive programming.
 * Use AC_CHECK_MEMBERS in configure.ac to check for specific struct
   statfs/struct statvfs members that we use in opal/util/path.c
 * In path.c, add some #includes as listed on the OS man page for
   statfs(2) (OS X 10.8.5/Mountain Lion)
 * The previous code used statvfs() on Solaris and statfs() everywhere
   else.  Attempting to replicate this with behavior-based configure
   testing led to fairly complicted if/else logic, so the new code
   uses whichever of the two are available (i.e., it might actually
   use both -- OS X 10.8.5 and RHEL 6.5 have both statfs() and
   statvfs()).  The rationale here is that we don't really care which
   of the two functions report the answer; we'll take the answer
   regardless of where it comes from.  For example, if one function
   returns a failure and the other does not, we'll use the results
   from the successful function and ignore the failed one.

This new code seems to work on OS X and Linux.  We'll have to see what
happens with MTT and future Paul Hargrove testing...

cmr=v1.7.4:reviewer=ompi-rm1.7:subject=Make statfs/statvfs more robust

This commit was SVN r30198.
2014-01-09 21:28:52 +00:00
Brian Barrett
8b778903d8 Fix longstanding issue with our multi-project support. Rather than using
pkg{data,lib,includedir}, use our own ompi{data,lib,includedir}, which is
always set to {datadir,libdir,includedir}/openmpi.  This will keep us from
having help files in prefix/share/open-rte when building without Open MPI,
but in prefix/share/openmpi when building with Open MPI.

This commit was SVN r30140.
2014-01-07 22:11:15 +00:00
Ralph Castain
07503d8d6b Add some plumbing for ORCM support to keep the two code repos from diverging.
This commit was SVN r30115.
2014-01-03 22:35:20 +00:00
Ralph Castain
7cf0fc5578 One more round of sys_limit fixes...sigh
Refs trac:4010

This commit was SVN r30011.

The following Trac tickets were found above:
  Ticket 4010 --> https://svn.open-mpi.org/trac/ompi/ticket/4010
2013-12-20 14:44:51 +00:00
Ralph Castain
6e6351959d Check for all the RLIMIT_foo constants that we use, and update the limit checks to use the new #define values. Fix a bug where failure of some might lead to incorrect bracketing.
Refs trac:4010

This commit was SVN r30009.

The following Trac tickets were found above:
  Ticket 4010 --> https://svn.open-mpi.org/trac/ompi/ticket/4010
2013-12-20 14:09:43 +00:00
Brian Barrett
6ef938de3f * Per the Developer's meeting today, restructure the threading in Open MPI a bit
more:
  - Remove OPAL_ENABLE_MULTI_THREADS, since it didn't really do anything
    correctly.  Opal always has threads enabled at this point.
  - Remove OMPI_ENABLE_PROGRESS_THREADS, since this hasn't worked in
    8 years and it has performance issues we'll never be able to
    overcome.  Note that we have plans for re-adding async progress, using
    a hybrid protocol of async and sync sends.
  - OMPI_ENABLE_THREAD_MULTIPLE now determines whether the thread lock
    macros do the check or not.
  - Condition variables are ALWAYS polling right now, which fixes the thread
    live-lock currently found when THREAD_MULTIPLE is turned on.

This commit was SVN r29891.
2013-12-13 19:40:12 +00:00
Brian Barrett
9a81a72c13 Remove support for pre-2.0 Libtool
This commit was SVN r29884.
2013-12-13 17:04:28 +00:00
Jeff Squyres
3bd9c603ff Clean up variables used in configure with OPAL_VAR_SCOPE.
This is helpful in the work for #3694: ensure that many places that
eventually end up in configure don't overly-pollute the global shell
variable space (because debugging accidental shell variable pollution
can be a real pain).

Refs trac:3694

This commit was SVN r29830.

The following Trac tickets were found above:
  Ticket 3694 --> https://svn.open-mpi.org/trac/ompi/ticket/3694
2013-12-06 23:40:34 +00:00
Jeff Squyres
bb6908c9f0 Fix ordering problem in AC_CONFIG_FILE actions.
The chmod action statements need to be put in individual
AC_CONFIG_FILE statements that generate the target file in question.
With the original code, the 2 chmod statements were executed for
''each'' file in the AC_CONFIG_FILES block (resulting in both error
messages before the files were created, and needless chmods after the
files were created).

This commit was SVN r29829.
2013-12-06 23:36:36 +00:00
Jeff Squyres
a2aee3ecf1 Ensure that ompi_fortran_happy is set to 0 when we're not building the
OMPI project.  This is necessary because some of the threading tests
(that are even used in ORTE) use this result.

This commit was SVN r29801.
2013-12-04 21:16:15 +00:00
Mike Dubman
bd358cb180 Apply Jeff`s patch from ticket: 3145
Refs: 3763

This commit was SVN r29751.
2013-11-25 11:02:42 +00:00
Ralph Castain
2ca6548433 We now require AM 1.12.2
cmr=v1.7.4:reviewer=jsquyres

This commit was SVN r29711.
2013-11-14 21:38:15 +00:00
Mike Dubman
04b134eace 1. Default target (e.g. 'make all') now build all avaliable examples depends on configuration.
2. Oshmem examples moved to 'mpi' build target.
3. Oshmem examples renamed as 'shmem' => 'oshmem'.
4. Fixed warnings in oshmem_info.


Refs: 3763

This commit was SVN r29663.
2013-11-12 13:02:07 +00:00
Mike Dubman
be80ade431 Implemening Jeffs comments
Refs: #3887 reviewer=ompi-rm1.7

This commit was SVN r29647.
2013-11-09 15:41:31 +00:00
Mike Dubman
926667c114 Move debian/ into contrib
Refs: #3887
reviewer=ompi-rm1.7

This commit was SVN r29633.
2013-11-07 14:19:27 +00:00
Mike Dubman
d8a24692b0 revert r29615, will stick to Dave suggestion and put everything under contrib/dist/linux/debian
Refs: #3887

This commit was SVN r29632.

The following SVN revision numbers were found above:
  r29615 --> open-mpi/ompi@c356bdeeae
2013-11-07 09:28:43 +00:00
Mike Dubman
c356bdeeae packaging: add support for debian + example
unfortunately the debian packaging files should reside in the root folder
and cannot be placed under contrib/dist/... tree.
developed by Aleksey, reviewed by miked
cmr=v1.7.4:reviewer=ompi-gk1.7

This commit was SVN r29615.
2013-11-06 12:50:28 +00:00
Ralph Castain
588e7ce974 Cleanup the Java setup m4's - orte doesn't require java, and we do all compiler checks in opal
This commit was SVN r29530.
2013-10-26 19:43:32 +00:00
Jeff Squyres
d9be19f011 Added shared library versions to those who were missing it.
The following common shared libraries did not have versioning:

 * ompi/common/ofacm
 * ompi/common/verbs
 * ompi/common/ugni

Additionally, we still had shared library versions in VERSION for the
following libraries, which no longer exist:

 * ompi/common/portals
 * opal/common/hwloc

This commit was SVN r29421.
2013-10-10 13:25:57 +00:00
Jeff Squyres
0d093176e1 Add missing .so version numbers for libmpi_usempif08.so.
cmr=v1.7.3:reviewer=rhc:subject=Add missing libmpi_usempif08 shared lib

This commit was SVN r29401.
2013-10-08 16:20:12 +00:00
Ralph Castain
3d1fdf5528 Ensure we add --no-undefined to libtool for cygwin
This commit was SVN r29389.
2013-10-06 23:56:54 +00:00
Jeff Squyres
7941c81caa The TargetConditionals.h check is specific to Java -- move it to
ompi_setup_java.m4.

This commit was SVN r29261.
2013-09-26 21:34:00 +00:00
Joshua Ladd
b3f88c4a1d Per the RFC schedule, this commit adds Mellanox OpenSHMEM to the trunk. It does not yet run on OSX or with CM PML for an MTL other than MXM. Mellanox is aware of these issues and is in the process of resolving them. This should be added to \ncmr=v1.7.4:subject=Move OSHMEM to 1.7.4:reviewer=rhc
This commit was SVN r29153.
2013-09-10 15:34:09 +00:00
Brian Barrett
16a1166884 Remove the proc_pml and proc_bml fields from ompi_proc_t and replace with a
configure-time dynamic allocation of flags.  The net result for platforms
which only support BTL-based communication is a reduction of 8*nprocs bytes
per process.  Platforms which support both MTLs and BTLs will not see
a space reduction, but will now be able to safely run both the MTL and BTL
side-by-side, which will prove useful.

This commit was SVN r29100.
2013-08-30 16:54:55 +00:00
Nathan Hjelm
c4c69b4ddf MPI-3: add support for large counts using derived datatypes
Add support for MPI_Count type and MPI_COUNT datatype and add the required
MPI-3 functions MPI_Get_elements_x, MPI_Status_set_elements_x,
MPI_Type_get_extent_x, MPI_Type_get_true_extent_x, and MPI_Type_size_x.
This commit adds only the C bindings. Fortran bindins will be added in
another commit. For now the MPI_Count type is define to have the same size
as MPI_Offset. The type is required to be at least as large as MPI_Offset
and MPI_Aint. The type was initially intended to be a ssize_t (if it was
the same size as a long long) but there were issues compiling romio with
that definition (despite the inclusion of stddef.h).

I updated the datatype engine to use size_t instead of uint32_t to support
large datatypes. This will require some review to make sure that 1) the
changes are beneficial, 2) nothing was broken by the change (I doubt
anything was), and 3) there are no performance regressions due to this
change.

Increase the maximum number of predifined datatypes to support MPI_Count

Put common get_elements code to ompi/datatype/ompi_datatype_get_elements.c

Update MPI_Get_count to reflect changes in MPI-3 (return MPI_UNDEFINED when the count is too large for an int)

This commit was SVN r28932.
2013-07-23 15:35:14 +00:00
Ralph Castain
4eb0dfa039 This has apparently been wrong for some time! Fix the common/pmi libraries so we build them dynamic so they can be properly linked into the components that use them. Define required library version numbers and so some other cuteness to make it all work.
cmr:v1.7.3:reviewer=jsquyres

This commit was SVN r28842.
2013-07-18 18:42:42 +00:00
Rolf vandeVaart
49663fb802 Move CUDA-aware configurary to its own file and other minor changes due to review.
This commit was SVN r28832.
2013-07-17 22:12:29 +00:00
Jeff Squyres
fde6207fe1 Patch for Cygwin support: use correct DSO/shared library prefix and
suffix.  Thanks to Marco Atzeri for reporting the issue and providing
an initial patch.

This commit was SVN r28059.
2013-02-15 14:12:39 +00:00
Joshua Ladd
70ad711337 Backing out the Open SHMEM project
This commit was SVN r28050.
2013-02-12 17:45:27 +00:00
Mike Dubman
ff384daab4 Added new project: oshmem.
This commit was SVN r28048.
2013-02-12 15:33:21 +00:00
Jeff Squyres
f922fcea08 Due to this thread:
http://www.open-mpi.org/community/lists/users/2013/02/21356.php and a
helpful tip from Dave Goodell, set the precious variables for
compilers to "no" that we don't want.  Libtool's m4 configry will
interpret this as "I won't be using this language; don't bother
setting it up."

This commit was SVN r28047.
2013-02-12 15:24:40 +00:00
Ralph Castain
4fdc6f1127 Revise the approach towards the FT options. Include them in a new opal_setup_ft.m4 file. Capture the ft-thread option there as well since it had slipped thru the cracks. Add a detailed comment to configure.ac that describes how to make those options visible, if desired.
This commit was SVN r27969.
2013-01-29 18:30:41 +00:00
Brian Barrett
b8442ba505 Revamp the handling of wrapper compiler flags. The user flags, main configure
flags, and mca flags are kept seperate until the very end.  The main configure
wrapper flags should now be modified by using the OPAL_WRAPPER_FLAGS_ADD
macro.  MCA components should either let <framework>_<component>_{LIBS,LDFLAGS}
be copied over OR set <framework>_<component>_WRAPPER_EXTRA_{LIBS,LDFLAGS}.
The situations in which WRAPPER CPPFLAGS can be set by MCA components was
made very small to match the one use case where it makes sense.

This commit was SVN r27950.
2013-01-29 00:00:43 +00:00