This is a point-in-time update that includes support for several new PMIx features, mostly focused on debuggers and "instant on":
* initial prototype support for PMIx-based debuggers. For the moment, this is restricted to using the DVM. Supports direct launch of apps under debugger control, and indirect launch using prun as the intermediate launcher. Includes ability for debuggers to control the environment of both the launcher and the spawned app procs. Work continues on completing support for indirect launch
* IO forwarding for tools. Output of apps launched under tool control is directed to the tool and output there - includes support for XML formatting and output to files. Stdin can be forwarded from the tool to apps, but this hasn't been implemented in ORTE yet.
* Fabric integration for "instant on". Enable collection of network "blobs" to be delivered to network libraries on compute nodes prior to local proc spawn. Infrastructure is in place - implementation will come later.
* Harvesting and forwarding of envars. Enable network plugins to harvest envars and include them in the launch msg for setting the environment prior to local proc spawn. Currently, only OmniPath is supported. PMIx MCA params control which envars are included, and also allows envars to be excluded.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
Reading the system clock on every call to opal_progress() is an
expensive operation on most architectures, and it can negatively affect
the performance, for example of message rate benchmarks.
We change opal_progress() to read the clock once per 8 calls, unless
there are active users of the event mechanism.
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
This commit renames the arithmetic atomic operations in opal to
indicate that they return the new value not the old value. This naming
differentiates these routines from new functions that return the old
value.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This commit eliminates the old opal_atomic_bool_cmpset functions. They
have been replaced by the opal_atomic_compare_exchange_strong
functions.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This commit renames the atomic compare-and-swap functions to indicate
the return value. This is in preperation for adding support for a
compare-and-swap that returns the old value. At the same time the
return type has been changed to bool.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Initialize the reachable framework during opal_init() and tear
it back down during opal_finalize(). The framework was never
used, so the lack of initialization didn't matter, but this is
a required step in using the framework.
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
Still in the "needs to be done" category:
* mapping/ranking/binding options aren't correctly supported
* if the DVM encounters some errors (e.g., not enough resources for the job), the resulting error is globally set and impacts any subsequent job submission
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
Passed the below set of symbols into a script that added ompi_ to them all.
Note that if processing a symbol named "foo" the script turns
foo into ompi_foo
but doesn't turn
foobar into ompi_foobar
But beyond that the script is blind to C syntax, so it hits strings and
comments etc as well as vars/functions.
coll_base_comm_get_reqs
comm_allgather_pml
comm_allreduce_pml
comm_bcast_pml
fcoll_base_coll_allgather_array
fcoll_base_coll_allgatherv_array
fcoll_base_coll_bcast_array
fcoll_base_coll_gather_array
fcoll_base_coll_gatherv_array
fcoll_base_coll_scatterv_array
fcoll_base_sort_iovec
mpit_big_lock
mpit_init_count
mpit_lock
mpit_unlock
netpatterns_base_err
netpatterns_base_verbose
netpatterns_cleanup_narray_knomial_tree
netpatterns_cleanup_recursive_doubling_tree_node
netpatterns_cleanup_recursive_knomial_allgather_tree_node
netpatterns_cleanup_recursive_knomial_tree_node
netpatterns_init
netpatterns_register_mca_params
netpatterns_setup_multinomial_tree
netpatterns_setup_narray_knomial_tree
netpatterns_setup_narray_tree
netpatterns_setup_narray_tree_contigous_ranks
netpatterns_setup_recursive_doubling_n_tree_node
netpatterns_setup_recursive_doubling_tree_node
netpatterns_setup_recursive_knomial_allgather_tree_node
netpatterns_setup_recursive_knomial_tree_node
pml_v_output_close
pml_v_output_open
intercept_extra_state_t
odls_base_default_wait_local_proc
_event_debug_mode_on
_evthread_cond_fns
_evthread_id_fn
_evthread_lock_debugging_enabled
_evthread_lock_fns
cmd_line_option_t
cmd_line_param_t
crs_base_self_checkpoint_fn
crs_base_self_continue_fn
crs_base_self_restart_fn
event_enable_debug_output
event_global_current_base_
event_module_include
eventops
sync_wait_mt
trigger_user_inc_callback
var_type_names
var_type_sizes
Signed-off-by: Mark Allen <markalle@us.ibm.com>
* `ompi_info --show-failed` will include the failed components along
with information about why they failed.
Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
* Add a path for failed component load information to be reported up.
* This allows ompi_info to display this information inline to make it
easier for folks to see if the component is present but failed for
some reason. Most likely a missing library, but could be a libnl
conflict.
* Add MCA parameter to enable this feature:
- `mca_base_component_track_load_errors` takes a boolean
- Default: `false`
Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
This commit adds a new base enumerator type for variables that take of
the values -1, 0, and 1. These values are mapped to the strings auto,
false, true. This commit updates the mpi_leave_pinned MCA variable to
use the new enumerator.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
- New MCA option: opal_stacktrace_output
- Specifies where the stack trace output stream goes.
- Accepts: none, stdout, stderr, file[:filename]
- Default filename 'stacktrace'
- Filename will be `stacktrace.PID`, or if VPID is available,
then the filename will be `stacktrace.VPID.PID`
- Update util/stacktrace to allow for different output avenues
including files. Previously this was hardcoded to 'stderr'.
- Since opal_backtrace_print needs to be signal safe, passing it a
FILE object that actually represents a file stream is difficult. This
is because we cannot open the file in the signal handler using
`fopen` (not safe), but have to use `open` (safe). Additionally, we
cannot use `fdopen` to convert the `int fd` to a `FILE *fh` since it
is also not signal safe.
- I did not want to break the backtrace.h API so I introduced a new
rule (documented in `backtrace.c`) that if the `FILE *file`
argument is `NULL` then look for the `opal_stacktrace_output_fileno`
variable to tell you which file descriptor to use for output.
Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
there is no such thing as pthread_join(main_thread), so key destructors
are never invoked on the main thread, which causes valgrind report
some memory leaks. Manually store and then invoke the key destructors and
make valgrind happy.
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
the class system can be initialized/finalized as many times as we like,
so there is no more need to have opal_class_finalize() invoked in a destructor
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
Still not completely done as we need a better way of tracking the routed module being used down in the OOB - e.g., when a peer drops connection, we want to remove that route from all conduits that (a) use the OOB and (b) are routed, but we don't want to remove it from an OFI conduit.
if MPI_Init[_thread]/MPI_Finalize and MPI_T_init_thread/MPI_T_finalize
are balanced, opal_initialized is zero, and hence opal_cleanup destructor
never invokes opal_class_finalize.
if MPI_Init[_thread] nor MPI_T_init_thread have been called, classes is NULL,
so opal_class_finalize does nothing
This commit adds another check to the low-priority callback
conditional that short-circuits the atomic-add if there are no
low-priority callbacks. This should improve performance in the common
case.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This commit fixes a compile error on 32-bit platforms. The
low-priority call counter was always using 64-bit atomics which will
not work if 64-bit atomic math is not available. Updated to use 32-bit
instead.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Add PMIx 2.0
Remove PMIx 1.1.4
Cleanup copying of component
Add missing file
Touchup a typo in the Makefile.am
Update the pmix ext114 component
Minor cleanups and resync to master
Update to latest PMIx 2.x
Update to the PMIx event notification branch latest changes
Per discussion on https://github.com/open-mpi/ompi/pull/1767 (and some
subsequent phone calls and off-issue email discussions), the PSM
library is hijacking signal handlers by default. Specifically: unless
the environment variables `IPATH_NO_BACKTRACE=1` (for PSM / Intel
TrueScale) is set, the library constructor for this library will
hijack various signal handlers for the purpose of invoking its own
error reporting mechanisms.
This may be a bit *surprising*, but is not a *problem*, per se. The
real problem is that older versions of at least the PSM library do not
unregister these signal handlers upon being unloaded from memory.
Hence, a segv can actually result in a double segv (i.e., the original
segv and then another segv when the now-non-existent signal handler is
invoked).
This PSM signal hijacking subverts Open MPI's own signal reporting
mechanism, which may be a bit surprising for some users (particularly
those who do not have Intel TrueScale). As such, we disable it by
default so that Open MPI's own error-reporting mechanisms are used.
Additionally, there is a typo in the library destructor for the PSM2
library that may cause problems in the unloading of its signal
handlers. This problem can be avoided by setting `HFI_NO_BACKTRACE=1`
(for PSM2 / Intel OmniPath).
This is further compounded by the fact that the PSM / PSM2 libraries
can be loaded by the OFI MTL and the usNIC BTL (because they are
loaded by libfabric), even when there is no Intel networking hardware
present. Having the PSM/PSM2 libraries behave this way when no Intel
hardware is present is clearly undesirable (and is likely to be fixed
in future releases of the PSM/PSM2 libraries).
This commit sets the following two environment variables to disable
this behavior from the PSM/PSM2 libraries (if they are not already
set):
* IPATH_NO_BACKTRACE=1
* HFI_NO_BACKTRACE=1
If the user has set these variables before invoking Open MPI, we will
not override their values (i.e., their preferences will be honored).
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
This commit fixes a bug in opal progress registration that can cause
crashes when a progress function is registered while another thread is
in opal_progress(). Before this commit realloc is used to allocate
more space for progress functions but it is possible for a thread in
opal_progress() to try to read from the array that is freed by realloc
before the array is re-assigned when realloc returns. To prevent this
race use malloc + memcpy to fill the new array and atomically swap out
the old and new array pointers.
Per suggestion we now allocate a default of 8 slots for callbacks and
double the current number when we run out of space.
This commit also fixes leaking the callbacks_lp array.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
This commit changes the behavior of bml/r2 from conditionally
registering btl progress functions to always registering progress
functions. Any progress function beloning to a btl that is not yet in
use is registered as low-priority. As soon as a proc is added that
will make use of the btl is is re-registered normally.
This works around an issue with some btls. In order to progress a
first message from an unknown peer both ugni and openib need to have
their progress functions called. If either btl is not in use after the
first call to add_procs the callback was never happening. This commit
ensures the btl progress function is called at some point but the
number of progress callbacks is reduced from normal to ensure lower
overhead when a btl is not used. The current ratio is 1 low priority
progress callback for every 8 calls to opal_progress().
Fixesopen-mpi/ompi#1676
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Take another shot at untangling the spaghetti
orterun: fix for command line parsing
orte-submit calls opal_init_util () before parsing out MCA command line
options (-mca, -am, etc). This prevents mpirun from setting opal MCA
variables for some frameworks as well as the MCA base. This is because
when a framework is opened all of its variables are set to read-only.
Eventually we want to lift this restriction on some MCA variables but
since -mca is affected we must parse out the MCA command line options
before opal_init_util(). This commit fixes the bug by adding a new
option to opal_cmd_line_parse (ignore unknown option) so orte-submit
can pre-parse the command line for MCA options.
Signed-off-by: Nathan Hjelm <hjelmn@me.com>
Minor cleanups to avoid releasing/recreating the cmd line
Define OPAL_MAXHOSTNAMELEN to be either:
(MAXHOSTNAMELEN + 1) or
(limits.h:HOST_NAME_MAX + 1) or
(255 + 1)
For pmix code, define above using PMIX_MAXHOSTNAMELEN.
Fixup opal layer to use the new max.
Signed-off-by: Karol Mroz <mroz.karol@gmail.com>
