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Jeff Squyres
49be4b1e45 Fixes trac:1383
Lenny and I went back and forth on whether we should simply register
another "mpi_paffinity_alone" MCA param and then try to figure out
which one was set in ompi_mpi_init, but there was difficulty in
figuring out what to do.  So it seemed like the Right Thing to do was
to implement what was committed in r18770; then we could tell where
MCA parameters were set from and you could do Better Things (this is
also useful in the openib BTL, where parameters can be set either via
MCA parameter or via an INI file).

But after that was done, it seemed only a few steps further to
actually implement two new features in the MCA params area:

 * Synonyms (where one MCA param name is a synonym for another)
 * Allow MCA params and/or their synonyms to be marked as "deprecated"
   (printing out warnings if they are used)

These features have actually long been discussed/desired, and I had
some time in airports and airplanes recently where I could work in
this stuff on a standalone laptop.  So I did it.  :-)

This commit introduces these two new features, and then uses them to
register mpi_paffinity_alone as a non-deprecated synonym for
opal_paffinity_alone.  A few other random points in this commit:

 * Add a few error checks for conditions that were not checked before
 * Correct some comments in mca_base_params.h
 * Add a few comments in strategic places
 * ompi_info now prints additional information:
   * for any MCA parameter that has synonyms, it lists all the
     synonyms
   * synonyms are also output as 1st-class MCA params, but with an
     additional attribute indicating that they have a "parent"
   * all MCA param name (both "real" or "synonym") will output an
     attribute indicating whether it is deprecated or not.  A synonym
     is deprecated if it iself is marked as deprecated (via the
     mca_base_param_regist_syn() or mca_base_param_register_syn_name()
     functions) or if its "parent" MCA parameter is deprecated

This commit was SVN r18859.

The following SVN revision numbers were found above:
  r18770 --> open-mpi/ompi@8efe67e08c

The following Trac tickets were found above:
  Ticket 1383 --> https://svn.open-mpi.org/trac/ompi/ticket/1383
2008-07-10 01:44:51 +00:00
Ralph Castain
0532d799d6 Complete implementation of the --without-rte-support configure option. Working with Brian, this has been tested on RedStorm.
Some minor changes to help facilitate debugger support so that both mpirun and yod can operate with it. Still to be completed.

This commit was SVN r18664.
2008-06-18 03:15:56 +00:00
Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
Ralph Castain
9927b2445c Remove the filter framework - the xml support will have to be provided in a different manner that will be implemented shortly
This commit was SVN r18572.
2008-06-04 09:04:51 +00:00
Ralph Castain
828ae26d90 ORTE-level MCA params are defined in several places. Ompi_info cannot call orte_init due to an issue with the memory allocator, thus making it impossible for ompi_info to display all of the ORTE-level MCA params.
By consolidating them all into one function, ompi_info can call that function and register the desired variables. This also requires, however, that ompi_info call orte_output_init to avoid generating tons of error messages, so make that adjustment too. 

Fixes ticket #1314

In addition, orte_output has a race condition issue whereby calls to orte_output/verbose can occur prior to either the RML being defined/setup, or the HNP being defined. This latter occurs during the initialization of the orte_process_info structure. In both cases, there is no way orte_output can send the output to the HNP. Hence, the message must be simply output locally.

Fixes ticket #1315

This commit was SVN r18524.
2008-05-28 13:29:58 +00:00
Jeff Squyres
c8c01572d0 ompi_info was erroneously not showing all the paths that it supports
(via compiled-in defaults/configure, or via env variables).

This commit was SVN r18456.
2008-05-19 17:44:56 +00:00
Jeff Squyres
1cc663ebf6 Change this back to use opal_init_util() -- using orte_init() mucks
with the C++ memory allocator.  Let's not go there.

This commit was SVN r18447.
2008-05-16 14:18:56 +00:00
Jeff Squyres
fb17097de4 Make ompi_info correctly display "filter" components
This commit was SVN r18435.
2008-05-13 20:56:20 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Jeff Squyres
e76d2dd518 This is an internal function; this error won't happen.
This commit was SVN r18406.
2008-05-07 19:00:34 +00:00
Jeff Squyres
dee561d29e Per recent off-list discussions about the build system, I have done
some cleanups and standardizations in the various */tools/*/ 
Makefile.am files.  This commit:

 * Somewhat simplify the tool Makefile.am's 
 * Makes the tool Makefile.am's consistent with each other (do similar
   actions in similar ways)
 * Update the tool Makefile.am's to remove old kruft that was required
   by older versions of AM (trunk requires AM >=1.10)

This commit was SVN r17921.
2008-03-22 02:04:05 +00:00
Tim Prins
1b34620d8e Make the default to enable symbol visibility.
Fixes trac:1222

This commit was SVN r17712.

The following Trac tickets were found above:
  Ticket 1222 --> https://svn.open-mpi.org/trac/ompi/ticket/1222
2008-03-05 01:30:32 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00
Josh Hursey
99144db970 Improve checkpoint/restart support by allowing a checkpoint to progress when the process is *not* in the MPI library. This involves creating a separate thread for polling for a checkpoint request. This thread is active when the MPI process is not in the MPI library, and paused when the MPI process is in the library.
Some MPI C interface files saw some spacing changes to conform to the coding standards of Open MPI.

Changed MPI C interface files to use {{{OPAL_CR_ENTER_LIBRARY()}}} and {{{OPAL_CR_EXIT_LIBRARY()}}} instead of just {{{OPAL_CR_TEST_CHECKPOINT_READY()}}}. This will allow the checkpoint/restart system more flexibility in how it is to behave.

Fixed the configure check for {{{--enable-ft-thread}}} so it has a know dependance on {{{--enable-mpi-thread}}} (and/or {{{--enable-progress-thread}}}).

Added a line for Checkpoint/Restart support to {{{ompi_info}}}.

Added some options to choose at runtime whether or not to use the checkpoint polling thread. By default, if the user asked for it to be compiled in, then it is used. But some users will want the ability to toggle its use at runtime.

There are still some places for improvement, but the feature works correctly. As always with Checkpoint/Restart, it is compiled out unless explicitly asked for at configure time. Further, if it was configured in, then it is not used unless explicitly asked for by the user at runtime.

This commit was SVN r17516.
2008-02-19 22:15:52 +00:00
Shiqing Fan
92bf2f27f3 Show information of memchecker component.
This commit was SVN r17439.
2008-02-12 23:07:14 +00:00
Shiqing Fan
f5792bbda5 merging the memchecker into trunk.
This commit was SVN r17424.
2008-02-12 08:46:27 +00:00
Sharon Melamed
025b68becf Move the carto framework to the trunk.
This commit was SVN r17177.
2008-01-23 09:20:34 +00:00
Jeff Squyres
3bdb4396dc Fixes trac:740: allow ompi_info to show the mandir.
This commit was SVN r16820.

The following Trac tickets were found above:
  Ticket 740 --> https://svn.open-mpi.org/trac/ompi/ticket/740
2007-12-03 15:35:37 +00:00
Jeff Squyres
cf98657adb * Clean up a little #if logic in MPI_WTICK / MPI_WTIME
* Update MPI_WTICK / MPI_WTIME man pages:
   * Fix C++ declarations
   * Note that we may use better than gettimeofday() on some platforms
 * Add "MPI_WTIME support" ("options:mpi-wtime") flag in ompi_info
   output indicating whether we use "native" or "gettimeofday" for
   MPI_WTIME

This commit was SVN r16774.
2007-11-26 18:23:53 +00:00
Ethan Mallove
005652c9d4 * Embed ident strings into the Open MPI libraries using one of the following
methods (in order of precedence):
  1. #pragma ident <ident string> (e.g., Intel and Sun)
  1. #ident <ident string> (e.g., GCC)
  1. static const char ident[] = <ident string> (all others)
By default, the ident string used is the standard Open MPI version string. Only
the following libraries will get the embedded version strings (e.g., DSOs will
not):
  * libmpi.so
  * libmpi_cxx.so
  * libmpi_f77.so
  * libopen-pal.so
  * libopen-rte.so
* Added two new configure options:
  * `--with-package-name="STRING"` (defaults to "Open MPI username@hostname
    Distribution"). `STRING` is displayed by `ompi_info` next to the "Package"
    heading.
  * `--with-ident-string="STRING"` (defaults to the standard Open MPI version
    string - e.g., X.Y.Zr######). `%VERSION%` will expand to the Open MPI
    version string if it is supplied to this configure option.

This commit was SVN r16644.
2007-11-03 02:40:22 +00:00
George Bosilca
1299ed433e Don't release the ODLS twice.
This commit was SVN r16430.
2007-10-11 17:30:03 +00:00
Brian Barrett
2b8af283de Add ability to completely turn off MPI one-sided support, so that users
can experiment with using ROMIO directly.

This commit was SVN r15922.
2007-08-18 21:35:51 +00:00
Mohamad Chaarawi
59a7bf8a9f Merging in the Sparse Groups..
This commit includes config changes..

This commit was SVN r15764.
2007-08-04 00:41:26 +00:00
Shiqing Fan
0f468f3668 - Remove the solution and project files, will commit them later.
This commit was SVN r15705.
2007-07-31 17:07:02 +00:00
Shiqing Fan
4d7b349cdb - Add VC8 solution and project files.
- If one wants to use this solution, remember to unload the project 'orte-restart' which is currently not working for Windows.

This commit was SVN r15680.
2007-07-30 11:05:34 +00:00
Ralph Castain
957128b887 Add new orte frameworks
This commit was SVN r15561.
2007-07-23 18:31:02 +00:00
Brian Barrett
39a6057fc6 A number of improvements / changes to the RML/OOB layers:
* General TCP cleanup for OPAL / ORTE
  * Simplifying the OOB by moving much of the logic into the RML
  * Allowing the OOB RML component to do routing of messages
  * Adding a component framework for handling routing tables
  * Moving the xcast functionality from the OOB base to its own framework

Includes merge from tmp/bwb-oob-rml-merge revisions:

    r15506, r15507, r15508, r15510, r15511, r15512, r15513

This commit was SVN r15528.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r15506
  r15507
  r15508
  r15510
  r15511
  r15512
  r15513
2007-07-20 01:34:02 +00:00
Jeff Squyres
cdb56d65e2 Due to the recent changes to reduce memory footprint, we need to set
an override here in ompi_info to force the loading of all components.
This is ok because we *only* call opal_init_util() (not orte_init() or
ompi_mpi_init()).

This commit was SVN r15386.
2007-07-12 15:23:49 +00:00
Jeff Squyres
b7a1778f93 * Add man page for ompi_info, originally contributed by Dirk
Eddelbuettel, one of the Debian/GNU Linux maintainers of the Open MPI
   package.  
 * Updated the contributed man page with some examples and
   updated option descriptions, and other small things.
 * Made the --hostname option work again.
 * Made the --version option work like it's supposed to.
 * Updated help strings that are displayed via --help to be a bit more
   descriptive in the parameters that various options accept.

This commit was SVN r15260.
2007-07-02 06:12:02 +00:00
Jeff Squyres
4bf964eb3f Fix issue found by Josh England: ompi_info deliberately clears
environment variables corresopnding to framework MCA parameters so
that the opal MCA base loads '''all''' components (not just the ones
specified in the environment variables).  This has the side-effect of
not showing the user's value when displaying the framework MCA
parameters via --param output.  For example:

{{{
shell% setenv OMPI_MCA_btl foo
shell% ompi_info --param btl base
}}}

The above sequence would show a "<none>" value for the "btl" parameter
instead of "foo".

This commit restores the environment after we munge it to make the
loader load all components.  Hence, the above command sequence will
show "foo" for the "btl" parameter value, not "<none>".

This commit was SVN r14771.
2007-05-24 21:30:38 +00:00
Sven Stork
a04c8eb39a - Bring over the visibility feature, for a finer symbol export control
via the visibility feature that is provided by some compilers.

  Per default this feature is disabled, to enable it you need to
  configure with --enable-visibility and obviously you need a compiler
  with visibility support. Please refer to the wiki for more information.
  https://svn.open-mpi.org/trac/ompi/wiki/Visibility

This commit was SVN r14582.
2007-05-04 09:03:37 +00:00
Jeff Squyres
401a072888 Revert r14435 -- it breaks compiling on Linux with at least the PGI
compiler suite.  The rule is that ompi_info.h is supposed to be the
''first'' file included so that it can affect system header files if
necessary (and it is sometimes necessary, such as with the PGI
compiler suite).

If this breaks VC on Windows, we'll have to find another fix.  More on
the mailing list...

This commit was SVN r14453.

The following SVN revision numbers were found above:
  r14435 --> open-mpi/ompi@a20b43ace9
2007-04-21 00:51:31 +00:00
Jeff Squyres
0ba47105ed Merge the /tmp/jms-installdirs-trunk branch into the trunk. This
finally brings in functionality that is already on the 1.2 branch, and
was developed and tested in the v1.2ofed branch (and other places).

Short version of new features:

 * Support for ibv_fork_init() 
 * Automatically fill in the openib BTL bandwidth value by 
   querying the HCA port 
 * Installdirs functionality 
 * Fixes to always use -I in the Fortran wrapper compilers (#924) 
 * Gleb's mpool updates 
 * Remove some kruft in btl/openib/configure.m4, therefore 
   fixing the harmless warnings noted in #665 
 * Bunches of updates to the Linux RPM spec file 

I.e., effectively the same thing that r14411 brought to the v1.2
branch.

Also effectively brought in r14432 and r14433 (some fixes on top of
the original r14411 commit to v1.2).  Still need to bring in the moral
equivalent of r14445 after this commit (fixes to installdirs).

This commit was SVN r14449.

The following SVN revision numbers were found above:
  r14411 --> open-mpi/ompi@83b31314ae
  r14432 --> open-mpi/ompi@a48f160595
  r14433 --> open-mpi/ompi@68f346d2bc
  r14445 --> open-mpi/ompi@13d366b827
2007-04-21 00:15:05 +00:00
Jeff Squyres
40f4b60a2a Use #ifdef, not #if
This commit was SVN r14439.
2007-04-20 14:26:20 +00:00
Shiqing Fan
a20b43ace9 The header file ompi_config.h should be included in ompi_info.h file but not in the .cc files. This make it could be compiled with VC compiler, and it works no difference under linux systems.
This commit was SVN r14435.
2007-04-20 09:03:16 +00:00
Rainer Keller
249abd29c2 - Mark some deprecated functions (two still commented) and fix to
not use opal_cmd_line_make_opt anymore.

This commit was SVN r14072.
2007-03-20 10:08:58 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00
George Bosilca
f9a3bbfd7a Don't miss the ODLS component from the output.
This commit was SVN r13299.
2007-01-25 08:37:36 +00:00
Brian Barrett
4e157380bf Heterogeneous support changes:
* Add line about heterogeneous support to ompi_info output
  * Print warning and abort if heterogeneous detected and 
    no heterogeneous support available.

Refs trac:587

This commit was SVN r12943.

The following Trac tickets were found above:
  Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
2006-12-30 17:13:18 +00:00
Galen Shipman
4e857f0384 add odls framework to ompi_info
This commit was SVN r12699.
2006-11-29 16:24:49 +00:00
George Bosilca
06563b5dec Last set of explicit conversions. We are now close to the zero warnings on
all platforms. The only exceptions (and I will not deal with them
anytime soon) are on Windows:
- the write functions which require the length to be an int when it's
  a size_t on all UNIX variants.
- all iovec manipulation functions where the iov_len is again an int
  when it's a size_t on most of the UNIXes.
As these only happens on Windows, so I think we're set for now :)

This commit was SVN r12215.
2006-10-20 03:57:44 +00:00
George Bosilca
5fb0c63959 Keep the ompi_config.h in the begining of the include list. This fixes
the #365. I found another way around on Windows.

This commit was SVN r11989.
2006-10-05 05:02:27 +00:00
Jeff Squyres
8226dab86c Fixes trac:377
Add --enable-orterun-prefix-by-default (and a synonym:
--enable-mpirun-prefix-by-default) to make orterun always behave as if
"--prefix $prefix" was given on the command line (where $prefix is the
value given to the --prefix option to configure).  This prevents many
rsh/ssh users from needing to modify their shell startup files to set
the LD_LIBRARY_PATH for Open MPI (they will still need to set PATH or
otherwise find the OMPI executables to mpicc/mpirun/etc. their MPI
applications).

Also added --noprefix option to orterun to disable this behavior.
Finally, note that even if --enable-orterun-prefix-by-default is
specified, if the user specifies --prefix or /path/to/mpirun, these
options will override the default value of the prefix ($prefix).

This commit was SVN r11669.

The following Trac tickets were found above:
  Ticket 377 --> https://svn.open-mpi.org/trac/ompi/ticket/377
2006-09-15 02:52:08 +00:00
Ralph Castain
37dfdb76eb Here is the major MAD-cure commit. I have written plenty about it, so I refer you here to those messages for a description of everything that was done.
This commit was SVN r11661.
2006-09-14 21:29:51 +00:00
Sven Stork
09e0d9d0d9 - revert commit 11632
- Real fix for pgi compilers and missing asprintf declaration.
  The problem was that C++ headers has been included before "ompi_config.h".
  This lead to the problem that "stdio.h" has been source without _GNU_SOURCE.

This commit was SVN r11649.
2006-09-14 08:10:02 +00:00
Sven Stork
0fd414b8e3 - use opal version, will satisfy some pgi compilers
This commit was SVN r11632.
2006-09-13 14:30:54 +00:00
George Bosilca
b645dbdf10 First load the C++ header files.
This commit was SVN r11438.
2006-08-27 04:49:48 +00:00
George Bosilca
3f0a7cad9e The last patch for Windows support. Mostly casting and conversion to C++ friendly headers.
This commit was SVN r11400.
2006-08-24 16:38:08 +00:00
George Bosilca
b621313653 Remove all references to the removed files.
This commit was SVN r11344.
2006-08-23 02:18:24 +00:00
Ralph Castain
8c7f0ed9ae Change the SOH to the new State Monitoring and Reporting (SMR) framework. New API's will be appearing in the new framework shortly - this just gets the name change into the system.
Other changes:

1. Remove the old xcpu components as they are not functional.

2. Fix a "bug" in orterun whereby we called dump_aborted_procs even when we normally terminated. There is still some kind of bug in this procedure, however, as we appear to be calling the orterun job_state_callback function every time a process terminates (instead of only once when they have all terminated). I'll continue digging into that one.

This will require an autogen/configure, I'm afraid.

This commit was SVN r11228.
2006-08-16 16:35:09 +00:00
Brian Barrett
6b00c8ed99 * add listing of which backtrace component got compiled in
This commit was SVN r11025.
2006-07-27 03:48:12 +00:00
Brian Barrett
7ea33eac02 Merge in rest of event library update branch, updating the event library to
libevent-1.1a.

svn merge -r10917:11006 https://svn.open-mpi.org/svn/ompi/tmp/libevent-update

This commit was SVN r11022.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r10917
  r11006
2006-07-27 01:51:18 +00:00
Brian Barrett
47725c9b02 * Add new PML (CM) and network drivers (MTL) for high speed
interconnects that provide matching logic in the library.
  Currently includes support for MX and some support for
  Portals
* Fix overuse of proc_pml pointer on the ompi_proc structuer, 
  splitting into proc_pml for pml data and proc_bml for
  the BML endpoint data
* bug fixes in bsend init code, which wasn't being used by
  the OB1 or DR PMLs...

This commit was SVN r10642.
2006-07-04 01:20:20 +00:00
Jeff Squyres
5f356edb64 Bring over changes from the /tmp/fortran-stuff series:
- Make the F90 bindings compile and link properly with gfortran 4.0,
  4.1, Intel 9.0, PGI 6.1, Sun (don't know version offhand -- the most
  current as of this writing, I think), and NAG 5.2, although some
  have limitations (e.g., NAG can't seem to handle the medium and
  large sizes)
- Building the F90 "small" module size is now the default, even for
  developers
- Split up mpif.h into multiple files because parts of it were toxic
  to the F90 bindings
- Properly specify unsized/unshaped arrays to make the bindings work
  on all known compilers
- Make ompi_info show Fortran 90 bindings size
- XML somewhat lags the generated scripts as of this commit, but
  functionality was my main goal -- the XML can be updated later (if
  at all).

This commit was SVN r10118.
2006-05-30 14:37:41 +00:00
Jeff Squyres
a553c3444a This has bugged me for a long time: make the "want libltdl" output
like the rest of the output (i.e., "yes" / "no" vs. "1" / "0").

This commit was SVN r10039.
2006-05-24 10:56:47 +00:00
Brian Barrett
52369307f8 Add a feature to the build system that Terry from Sun and I talked about
in San Jose.  Allow the configure option --disable-binaries to build OMPI,
but not build or install the support binaries (so basically, just build
the libraries).

This commit was SVN r9777.
2006-04-29 02:16:41 +00:00
Brian Barrett
ce72140633 Remove dependency libraries from these Makefile.ams - the libraries will
automagically bring in the libraries through the top-level library (so
liborte automatically brings in libopal, etc.).  Otherwise, we get some
warnings on Solaris

This should go to the v1.1 branch

This commit was SVN r9666.
2006-04-20 17:53:43 +00:00
Sven Stork
b34c128309 - add check for parseable synonym
This commit was SVN r9527.
2006-04-04 08:53:32 +00:00
Brian Barrett
c42da09796 * Fix a small bug George noticed - if you change the prefix (or any of the
installation directories) in configure, the files that depend on this
  information are not properly rebuilt.  If you need this information,
  don't setup a -D in the Makefile.am - instead, include 
  opal/install_dirs.h.
* Use the : option in AC_CONFIG_FILES to avoid needing to expose that
  we are playing around with temporary files with our headers to avoid
  rebuilding
* Clean up the version file information a bit, and like the install 
  directory stuff, make sure that there is a dependency so that 
  ompi_info gets rebuilt properly when a version number changes.

This commit was SVN r9256.
2006-03-12 04:35:01 +00:00
Jeff Squyres
f7b96edf2e Print the rcache components for the rcache framework, not the bml
components. 

This commit was SVN r9222.
2006-03-08 22:50:10 +00:00
Brian Barrett
2eb76ff0cd * finish the TEG/UNIQ/PTL removal
This commit was SVN r9118.
2006-02-23 00:39:01 +00:00
Brian Barrett
566a050c23 Next step in the project split, mainly source code re-arranging
- move files out of toplevel include/ and etc/, moving it into the
    sub-projects
  - rather than including config headers with <project>/include, 
    have them as <project>
  - require all headers to be included with a project prefix, with
    the exception of the config headers ({opal,orte,ompi}_config.h
    mpi.h, and mpif.h)

This commit was SVN r8985.
2006-02-12 01:33:29 +00:00
Jeff Squyres
d5e58c13dc Add the bml and rcache to the list of frameworks in ompi_info
This commit was SVN r8978.
2006-02-11 00:14:44 +00:00
Ralph Castain
4b9f015c0b Merge in the new data support subsystem for ORTE. MPI folks should not notice a difference. Longer explanation will be sent to developers mailing list.
This commit was SVN r8912.
2006-02-07 03:32:36 +00:00
Brian Barrett
b1d2424013 Merge in present work on the MPI-2 onesided chapter. The current code is not
complete, but stable enough that it will have no impact on general development,
so into the trunk it goes.  Changes in this commit include:

 - Remove the --with option for disabling MPI-2 onesided support.  It
   complicated code, and has no real reason for existing
 - add a framework osc (OneSided Communication) for encapsulating
   all the MPI-2 onesided functionality
 - Modify the MPI interface functions for the MPI-2 onesided chapter
   to properly call the underlying framework and do the required
   error checking
 - Created an osc component pt2pt, which is layered over the BML/BTL
   for communication (although it also uses the PML for long message
   transfers).  Currently, all support functions, all communication
   functions (Put, Get, Accumulate), and the Fence synchronization
   function are implemented.  The PWSC active synchronization
   functions and Lock/Unlock passive synchronization functions are
   still not implemented

This commit was SVN r8836.
2006-01-28 15:38:37 +00:00
Brian Barrett
c96f870674 * Merge of wrapper compiler updates from the bwb-wrapper-fix branch (r8690 -
r8698), with changes below:

  - Split wrapper flags into those required for each of the three projects,
    and cleaned up some cruft (including the LIBMPI_EXTRA_*FLAGS) through-
    out the build system
  - Added opal_init_util and opal_finalize_util to allow init / cleanup
    of all the opal code that doesn't require the MCA system
  - Create standalone key=value file parser, based on the one that used
    to be in the mca param parser, so that it can be shared in multiple
    places
  - Add wrapper datafiles for opal, orte, and ompi wrappers, and add
    wrapper compiler with support for all the old features

This commit was SVN r8699.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r8690
  r8698
2006-01-16 01:48:03 +00:00
Brian Barrett
60ac1cb5f4 print stack traces (when available) for opal and orte processes, as well as
ompi processes.  Also add SIGABRT to the list of signals that are intercepted
to print out pretty messages.

This commit was SVN r8672.
2006-01-11 04:36:39 +00:00
George Bosilca
4002365f43 On windows we have include io.h in order to have access to the isatty function.
This commit was SVN r8621.
2005-12-31 15:03:58 +00:00
George Bosilca
d3ed56e845 Remove the io.h header file.
This commit was SVN r8553.
2005-12-19 23:53:30 +00:00
George Bosilca
32a013e7d3 Add a header.
This commit was SVN r8552.
2005-12-19 23:32:16 +00:00
Rainer Keller
bf0892bb32 - Implement correct Fortran Logical-handling in f77/f90 interface in
case of:
    sizeof(MPI_Flogical) != sizeof (int)
  and
    Fortran value of .TRUE. != 1
  as is often the case.
- Check in configure the value of .TRUE., the C-type coresponding to
  logical and check, that fortran compiler does not do something strange
  with arrays of logicals
- Convert all occurrences of logicals in the fortran wrappers, only
  in case it is needed.
  *Please note* Implementation of MPI_Cart_sub needed special treatment.
- Output these value in ompi_info -a
- Clean up the prototypes_mpi.h to just have a single definition and
  thereby deleting the necessity for prototypes_pmpi.h

- configured, compiled and tested with F90-program, which uses
  MPI_Cart_create and MPI_Cart_get:
  linux ia32, gcc (no testing, as no f90)
  linux ia32, gcc --disable-mpi-f77 --disable-mpi-f90 (had a bug there)
  linux ia32, icc-8.1
  linux opteron, gcc-3.3.5, pgcc, pathccx/pathf90 (tested just
pgi-compiler)
  linux em64t, gcc, icc-8.1 (tested just icc)

This commit was SVN r8254.
2005-11-24 16:52:35 +00:00
Brian Barrett
878676218e Rename opal/memory to opal/memoryhooks because XLC++ on Mac OS X is broken.
When compiling C++ code that includes something that looks for the C++
header file "memory" (stupid C++ headers not having .h extensions), it
goes through the header file search path, which includes $(topsrcdir)/opal,
so it finds the directory $(topsrcdir)/opal/memory/ and tries to load
that as the memory header file and all goes downhill.

This commit was SVN r8111.
2005-11-11 00:26:27 +00:00
Jeff Squyres
42ec26e640 Update the copyright notices for IU and UTK.
This commit was SVN r7999.
2005-11-05 19:57:48 +00:00
Jeff Squyres
237bd4c6cd Fix ompi_info -- cxx:bindings was somehow hard-coded to "yes" instead
of reflecting whether the C++ bindings were supported or not.

This commit was SVN r7766.
2005-10-14 20:07:05 +00:00
Jeff Squyres
fcef1774d5 Per advice from Ralf W., change the pkgdata declarations in
Makefile.am's to be a *slightly* more correct (and, more importantly,
less error-prone) construct.

This commit was SVN r7554.
2005-09-30 13:32:39 +00:00
Brian Barrett
80ac5c2efd * there are now two upcoming points where we want to release a version with
a random string of characters as part of the version number (the really
  soon to happen 1.0lanl release and the 1.1sc2005 release that we've
  talked about).  So rather than having alpha and beta fields that must
  be numeric values, have a general field that can be any alphanumeric
  value.

This commit was SVN r7511.
2005-09-27 02:06:05 +00:00
Brian Barrett
ed56e743b7 * update configure.ac to use the modern version of AC_INIT and
AM_INIT_AUTOMAKE, instead of the deprecated version.
* Work around dumbness in modern AC_INIT that requires the version
  number to be set at autoconf time (instead of at configure time, as
  it was before).  Set the version number, minus the subversion r number,
  at autoconf time.  Override the internal variables to include the r
  number (if needed) at configure time.  Basically, the right thing
  should always happen.  The only place it might not is the version
  reported as part of configure --help will not have an r number.
* Since AM_INIT_AUTOMAKE taks a list of options, no need to specify
  them in all the Makefile.am files.
* Addes support for subdir-objects, meaning that object files are put
  in the directory containing source files, even if the Makefile.am is
  in another directory.  This should start making it feasible to
  reduce the number of Makefile.am files we have in the tree, which
  will greatly reduce the time to run autogen and configure.

This commit was SVN r7211.
2005-09-07 05:54:53 +00:00
Josh Hursey
4eefb33182 Some param changes:
- Change orte_base_infrastructre to orte_infrastructre to conform with 
  ompi_info's needs
- Move MCA Param registration in ORTE to a centralized function that is 
  called first in orte_init_stage1
- Set the infrastructre flag as an argument to orte_init
- Adjust initalization functions to properly pass down the infrastructre
  flag.

This commit was SVN r7053.
2005-08-26 20:13:35 +00:00
Jeff Squyres
900631e9f9 - Add a first cut of the memory affinity (maffinity) framework. It's
API is still a bit unstable and may change.
- Add a primitive "first use" component that simply has each process
  "touch" the pages that they want to use, thereby [hopefully] locking
  them locally to a specific processor
- Add hooks in ompi_mpi_init to enable memory affinity when processor
  affinity is used.
- Added hooks in ompi_mpi_finalize to shut down memory affinity when
  it was initialized during ompi_mpi_init.
- Added right hooks in ompi_info to display maffinity components.

This commit was SVN r7044.
2005-08-26 10:56:39 +00:00
Brian Barrett
ecf3921ace * fix some problems with C++ protection in timer headers
* Make ompi_info list timer components
* Remove flag to display whether we have memory intercepts (components are
  already listed), until we can figure out how to do it *after* the
  components are opened.

This commit was SVN r6950.
2005-08-21 19:14:49 +00:00
Brian Barrett
8aca9ef966 * remove need to edit project/Makefile.am and project/{dynamic-,}mca/Makefile.am when adding a new component. Configure / autogen now do it for you.
* Add base to memory framework so that we can do something sane with
  ompi_info
* Updated ompi_info to print components for memory framework and
  show whether we have memory hooks active or not.

This commit was SVN r6861.
2005-08-13 20:19:24 +00:00
Jeff Squyres
2cf38dc59f Add hooks in ompi_info for the new paffinity framework
This commit was SVN r6857.
2005-08-13 16:07:37 +00:00
Jeff Squyres
32e71e5c6c Fix a problem where orterun itself would not receive MCA parameters
that were set on the command line.  This was techinically exactly the
way the code was designed, but it certainly violated the Law of Least
Astonishment (even to its designer ;-) ).  So now if you execute
something like this:

   mpirun -mca pls_rsh_debug 1 -np 4 hello

You'll see debugging output from the rsh pls component, as you would
expect (this was not previously the case -- the MCA pls_rsh_debug
parame would be set to 1 in the 4 spawned hello processes, but *not*
in the orterun process).

More specifically, MCA parameters will be set in the orterun process
in the following cases:

- The new command line switch "--gmca" (or "-gmca") is used,
  indicating that the MCA parameter is "global".  --gmca also means
  that that MCA parameter will be applied to all context app's.  For
  example:

      mpirun -gmca foo bar -np 1 hello : -np 2 goodbye

  The foo MCA param will be set in both the hello and goodbye
  processes.

- If there is only one context app.  For example:

      mpirun -mca pls_rsh_debug 1 -np 4 hello

  will set pls_rsh_debug to 1 in both the orterun process and the 4
  spawned hello processes.

Also added a few more comments inside orterun to document a somewhat
confusing use of a state variable in a recursive case.

This commit was SVN r6764.
2005-08-08 16:42:28 +00:00
Brian Barrett
6f0b51e4db * only include sys/ioctl.h if it exists
This commit was SVN r6761.
2005-08-08 13:15:06 +00:00
Brian Barrett
18d09c14a7 * always include sys/ioctl.h for now. Needs to be protected by header check,
but this will be good enough for Linux and OS X and I don't want to change
  configure.ac mid-day for the other platforms

This commit was SVN r6740.
2005-08-04 18:48:36 +00:00
Brian Barrett
3867d59cf1 * Look at stdout instead of stdin for determining whether output is going
to a tty or not.  Now you can do something like:

     ompi_info -all | grep btl_portals

  and get the full line for each btl_portals parameter.
* For the case where stdout is a tty, we have my current nomination for
  Today's Useless OMPI Feature.  Autodetect the width of the terminal, so
  people with really wide terminals will get less wrapping

This commit was SVN r6722.
2005-08-03 14:48:48 +00:00
Jeff Squyres
4c1dd716c7 Change and add new features to the MCA parameter system:
- new preferred API calls for registering MCA parameters are
  mca_base_param_reg_{int|string} and
  mca_base_param_reg_{int|string}_name.
- See opal/mca/base/mca_base_param.h for docs on new calls.  
- Can now register and lookup a value at the same time.
- Can now mark a parameter "read only" at registration time
- Can now mark a parameter "internal" at registration time
- Can now associate a help message with the parameter at registration
  time; displayed in the ompi_info output.

The old API calls are still available for backwards compatibility
(mca_base_param_register_{int|string}.  They will eventually be
removed -- all developers are encouraged to use the new APIs from here
on out and replace any old calls with the new API.

Some params were also renamed -- the previous convention of using
"base_" as a prefix for any param that was not associated with a
component is henceforth deprecated.  Instead, use one of the following
prefixes:

mca: for anything in the MCA base itself
opal: for anything in OPAL
orte: for anything in ORTE
mpi: for anything in OMPI

This commit was SVN r6698.
2005-08-01 22:38:17 +00:00
Brian Barrett
3f09d5f2a4 * make btl open be safe to call multiple times (btl close already was)
* add btl back into ompi_info.  Since it now directly calls the
  open/close, the missing symbol problems Ralph was seeing when ob1 is
  ignored will not occur.

This commit was SVN r6652.
2005-07-28 16:31:29 +00:00
Brian Barrett
b0b6ddd078 * add --enable-heterogeneous (default: enabled) to enable heterogeneous
support in OMPI.  Currently only enables/disables the architecture
  sharing modex in ob1 pml.
* Add sds framework to ompi_info
* Figure out table ids to use for Portals BTL at configure time, since
  we should use 30 & 31 on Red Storm, but the reference implementation
  only supports 0-8.
* Some bug fixes in Portals UTCP sds

This commit was SVN r6650.
2005-07-28 16:16:13 +00:00
Jeff Squyres
fee0cf5f29 Quick (and temporary fix) for those getting missing symbols. Real fix
coming shortly (Monday or Tuesday).

This commit was SVN r6538.
2005-07-17 11:21:52 +00:00
Brian Barrett
14b89e0e50 Bunch more updates from operation Red Storm:
* Add ability to completely disable libltdl (the dlopen code to load
  dynamic shared objects) to configure: --disable-dlopen
* Added MCA param (component_disable_dlopen) to disable DSO loading
  at runtime
* Made the event library behave in some not-completely-erroneous way
  on platforms where it has absolutely no eventops support (ie, no
  select, poll, or epoll)
* Disabled orte_wait, opal_few, and opal_daemon_init code on
  platforms without fork, waitpid support.  All non-init functions
  will return OPMI_ERR_NOT_SUPPORTED
* Disable orteprobe tool when fork or pipe aren't supported

This commit was SVN r6490.
2005-07-14 18:05:30 +00:00
George Bosilca
ff3e243be5 Similar with close, PTL open should not be called directly. The PML will do it anyway.
This commit was SVN r6363.
2005-07-06 19:22:16 +00:00
George Bosilca
2f83301c82 Do not call the base PTL close directly. This is the PML job.
This commit was SVN r6359.
2005-07-06 18:25:03 +00:00
Jeff Squyres
ba99409628 Major simplifications to component versioning:
- After long discussions and ruminations on how we run components in
  LAM/MPI, made the decision that, by default, all components included
  in Open MPI will use the version number of their parent project
  (i.e., OMPI or ORTE).  They are certaint free to use a different
  number, but this simplification makes the common cases easy:
  - components are only released when the parent project is released
  - it is easy (trivial?) to distinguish which version component goes
    with with version of the parent project
- removed all autogen/configure code for templating the version .h
  file in components
- made all ORTE components use ORTE_*_VERSION for version numbers
- made all OMPI components use OMPI_*_VERSION for version numbers
- removed all VERSION files from components
- configure now displays OPAL, ORTE, and OMPI version numbers
- ditto for ompi_info
- right now, faking it -- OPAL and ORTE and OMPI will always have the
  same version number (i.e., they all come from the same top-level
  VERSION file).  But this paves the way for the Great Configure
  Reorganization, where, among other things, each project will have
  its own version number.

So all in all, we went from a boatload of version numbers to
[effectively] three.  That's pretty good.  :-)

This commit was SVN r6344.
2005-07-04 20:12:36 +00:00
Brian Barrett
170ef8af1f * rename ompi_show_help to opal_show_help
* rename ompi_stacktrace to opal_stacktrace
* rename ompi_strncpy to opal_strncpy

This commit was SVN r6336.
2005-07-04 02:38:44 +00:00
Brian Barrett
ed81e51c3a * rename ompi_printf to opal_printf
* rename ompi pty code to opal pty code
* rename ompi_qsort to opal_qsort

This commit was SVN r6335.
2005-07-04 02:16:57 +00:00
Brian Barrett
9f44b80291 * rename ompi_argv to opal_argv
* rename ompi_basename to opal_basename
* rename ompi bitop functions to opal
* rename ompi_cmd_line to opal_cmd_line
* rename ompi_sizet2int to opal_sizet2int
* rename orte_daemon_init to opal_daemon_init
* rename ompi_few to opal_few

This commit was SVN r6330.
2005-07-04 00:13:44 +00:00
Brian Barrett
a13166b500 * rename ompi_output to opal_output
This commit was SVN r6329.
2005-07-03 23:31:27 +00:00
Brian Barrett
39dbeeedfb * rename locking code from ompi to opal
This commit was SVN r6327.
2005-07-03 22:45:48 +00:00
Brian Barrett
764a9314db * rename ompi_value_array opal_value_array
This commit was SVN r6323.
2005-07-03 16:38:52 +00:00