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3150 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
e75d9b8296 Use orte_notifier to alert sys admins to checksum violations in the csum pml.
Add ability to store the RM's jobid string to tag the notifier message so that the sys admin knows what job had the problem.

This commit was SVN r21687.
2009-07-15 19:43:26 +00:00
Rainer Keller
8243831d76 - Get OpenIB BTL to work with old libibverbs installation
Tested on smoky.

This commit was SVN r21685.
2009-07-15 16:12:47 +00:00
Ralph Castain
dbac602be5 Add support for the add-host and add-hostfile MPI Info keys to allow Comm_spawn users to add new hosts to those already known by mpirun.
Requires full testing once comm_spawn is fixed (Edgar is working that now).

This commit was SVN r21664.
2009-07-14 14:34:11 +00:00
George Bosilca
2143424eb5 The MCA parameter should always be taken into account, independent on
how many networks are available on the node.

This commit was SVN r21652.
2009-07-13 19:40:00 +00:00
Josh Hursey
8d9d2ba7d1 Fix the datatype usage in CRCP Bkmrk. as a result of the great datatype shift in r21641
This commit was SVN r21650.

The following SVN revision numbers were found above:
  r21641 --> open-mpi/ompi@6c5532072a
2009-07-13 17:54:26 +00:00
Rainer Keller
6c5532072a - Split the datatype engine into two parts: an MPI specific part in
OMPI
   and a language agnostic part in OPAL. The convertor is completely
   moved into OPAL.  This offers several benefits as described in RFC
   http://www.open-mpi.org/community/lists/devel/2009/07/6387.php
   namely:
    - Fewer basic types (int* and float* types, boolean and wchar
    - Fixing naming scheme to ompi-nomenclature.
    - Usability outside of the ompi-layer.
 - Due to the fixed nature of simple opal types, their information is
   completely
   known at compile time and therefore constified
 - With fewer datatypes (22), the actual sizes of bit-field types may be
   reduced
   from 64 to 32 bits, allowing reorganizing the opal_datatype
   structure, eliminating holes and keeping data required in convertor
   (upon send/recv) in one cacheline...
   This has implications to the convertor-datastructure and other parts
   of the code.
 - Several performance tests have been run, the netpipe latency does not
   change with
   this patch on Linux/x86-64 on the smoky cluster.
 - Extensive tests have been done to verify correctness (no new
   regressions) using:
   1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and
    ompi-ddt:
    a. running both trunk and ompi-ddt resulted in no differences
       (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run
       correctly).
    b. with --enable-memchecker and running under valgrind (one buglet
       when run with static found in test-suite, commited)
   2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt:
      all passed (except for the dynamic/ tests failed!! as trunk/MTT)
   3. compilation and usage of HDF5 tests on Jaguar using PGI and
      PathScale compilers.
   4. compilation and usage on Scicortex.
 - Please note, that for the heterogeneous case, (-m32 compiled
   binaries/ompi), neither
   ompi-trunk, nor ompi-ddt branch would successfully launch.

This commit was SVN r21641.
2009-07-13 04:56:31 +00:00
Brian Barrett
2f3c0b4fcf Drain pipe from service thread to main thread during shutdown. By this
point, the event engine has been shut down until btl finalization is
done, so opal_progress in the wait loop is not an option - we have
to drain from inside the btl.

Clean up the looping structure for the finalize routine

Update copyrights.

This commit was SVN r21620.
2009-07-09 22:13:10 +00:00
Brian Barrett
ac34b1de69 RDMA CM doesn't retry if a packet is dropped, just timesout during route
discovery, which results in a timeout and we don't recover.  Instead,
try to recover a couple of times by retrying.

This commit was SVN r21619.
2009-07-09 22:10:06 +00:00
George Bosilca
311e27b42f Pretty print an error message when the specified range of ports (for both
IPv4 and IPv6) is outside the legal boundaries. This fixes trac:1869.

This commit was SVN r21612.

The following Trac tickets were found above:
  Ticket 1869 --> https://svn.open-mpi.org/trac/ompi/ticket/1869
2009-07-07 17:52:30 +00:00
George Bosilca
4038834dfb Convert the port number in network order before binding the socket.
Thanks to Mariusz Mamonski (mamonski@man.poznan.pl) for the bug
report and patch.

This commit was SVN r21610.
2009-07-07 17:21:28 +00:00
Jeff Squyres
92e40cb20a Enable the coll sync component to barrier before each 1000th collective.
This commit was SVN r21594.
2009-07-02 20:16:45 +00:00
Brian Barrett
3b410b0200 Increase context ref count and push on list before calling rdma_resolve_addr,
in case the event returns before rdma_resolve_addr returns.

This commit was SVN r21588.
2009-07-02 16:12:19 +00:00
Shiqing Fan
0b56a8a4d5 Enable IPv6 on Windows by default, and fix two type casts for IPv6 operations.
This commit was SVN r21586.
2009-07-02 14:41:03 +00:00
Jeff Squyres
cad12fda5f * Remove an extra blank line from the help file
* Add the help file to the Makefile.am so that it gets installed

This commit was SVN r21567.
2009-06-30 18:58:09 +00:00
Eugene Loh
fcd9fabae9 Minor cleanup in the sm BTL. http://www.open-mpi.org/community/lists/devel/2009/06/6363.php
This commit was SVN r21556.
2009-06-27 23:42:09 +00:00
Nysal Jan
5b13fd004a Bump up default MTU for eHCA 2. Improves peak unidirectional bandwidth by around 14%
This commit was SVN r21553.
2009-06-27 07:39:30 +00:00
Ralph Castain
ee18838e2f Remove svn conflict lines due to commit r21551 in the sm btl. I #if 0'd out the offending line that cause the conflict just in case it was the correct one. However, this now compiles cleanly, minus the following warnings that I wasn't sure which way to resolve:
btl_sm.c: In function ‘mca_btl_sm_sendi’:
btl_sm.c:734: warning: comparison between signed and unsigned
btl_sm.c: In function ‘mca_btl_sm_send’:
btl_sm.c:812: warning: comparison between signed and unsigned

This commit was SVN r21552.

The following SVN revision numbers were found above:
  r21551 --> open-mpi/ompi@bd995d26b4
2009-06-27 01:39:15 +00:00
Eugene Loh
bd995d26b4 Try to improve flow control in the sm BTL:
- poll FIFO occasionally even if just sending messages
- retry pending sends more often
  - just before trying a new send
  - as part of mca_btl_sm_component_progress
Maintain two new mca_btl_sm_component variables, num_outstanding_frags
and num_pending_sends, to keep overhead low.


Drain only one message fragment from the FIFO per btl_sm_component_progress
call (rather than drain until empty, which in retrospect everyone considers
to have been a mistake).

This commit was SVN r21551.
2009-06-27 00:12:56 +00:00
George Bosilca
24e74922ce Not yet the right time for this to be there.
This commit was SVN r21540.
2009-06-26 16:00:55 +00:00
Lenny Verkhovsky
7f8dc7c8b8 fix for r21524, mispell fix HAVE_IBV_FORK_INIT
This commit was SVN r21533.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r21524
2009-06-25 17:45:38 +00:00
Terry Dontje
efac1b73fb Surround use of want_fork_support structure field with ifdef instead of c conditional.
This commit was SVN r21526.
2009-06-25 12:03:30 +00:00
Nysal Jan
938599cb2d Fix build failure with latest IBM XL C/C++ v10.1 compiler. Also this seems like cleaner code.
This commit was SVN r21497.
2009-06-23 14:08:04 +00:00
George Bosilca
7f24b41051 This function doesn't have to be globally visible.
This commit was SVN r21494.
2009-06-22 17:14:54 +00:00
Jeff Squyres
c39998db17 Also show the "you might not have enough registered memory" warning
message earlier in the openib BTL startup sequence

This commit was SVN r21469.
2009-06-18 12:24:39 +00:00
Rolf vandeVaart
36a560506c Fix error message to match code default.
This commit was SVN r21452.
2009-06-16 20:59:53 +00:00
Rainer Keller
5e6061af02 - Few fixes and comments
This commit was SVN r21443.
2009-06-15 21:12:04 +00:00
Ralph Castain
44bb265a52 Add a new MPI_Info key to preposition OMPI libraries - implementation underway, but this just defines and passes the new key
This commit was SVN r21425.
2009-06-12 17:53:13 +00:00
Jeff Squyres
814a8f5e0f * Fix #1916: endian problems in iwarp wireup on big endian machines
(now works on both big and little endian machines)
 * Be a little more flexible when looking for active devices in
   btl_openib_component.c
 * Add device name and port number to lots of verbose and help
   messages
 * Add a bunch of verbose messages to give insight into what is
   occurring during all the CPC wireups

This commit was SVN r21418.
2009-06-11 17:30:30 +00:00
Ralph Castain
4881cd0df3 Revert the prior change out from the individual .h files - the problem was in the Makefile.am's, causing the make dist to fail.
This commit was SVN r21414.
2009-06-11 03:15:47 +00:00
Ralph Castain
91ab2b3e4f Specify complete path to included header files so it compiles in all environments
This commit was SVN r21412.
2009-06-11 02:46:30 +00:00
Avneesh Pant
295c0c36bc Add new QLogic adapter to device parameter file.
This commit was SVN r21409.
2009-06-10 23:37:38 +00:00
Terry Dontje
fa9f356c8c This commit fixes trac:1931. By separating out structures and defines used by
the debugger plugins into files suffixed by _dbg.h.

This commit was SVN r21404.

The following Trac tickets were found above:
  Ticket 1931 --> https://svn.open-mpi.org/trac/ompi/ticket/1931
2009-06-10 14:57:28 +00:00
George Bosilca
f9a510fd8a There is no need for an atomic read if we are not in a threaded case.
This commit was SVN r21394.
2009-06-08 23:55:52 +00:00
Ralph Castain
4d3aa5a8a4 Once again, into the breach!
Yes, friends, our favorite PCIE BTL has resurfaced as mgmt vacillates over its existence. This is an updated version that actually mostly works, in its final stages of debugging.

Some generalization still remains to be done...

This commit was SVN r21358.
2009-06-02 22:26:36 +00:00
Shiqing Fan
e46bf10efd Correctly include win32 util header.
This commit was SVN r21343.
2009-06-01 19:16:00 +00:00
Rainer Keller
b572dc3591 - As discussed revert r21330, Fortran-configure info should
not end up in OPAL
 - Will post an updated patch for the OMPI_ALIGNMENT_ parts (within C).

This commit was SVN r21342.

The following SVN revision numbers were found above:
  r21330 --> open-mpi/ompi@95596d1814
2009-06-01 19:02:34 +00:00
Rainer Keller
95596d1814 - Move alignment and size output generated by configure-tests
into the OPAL namespace, eliminating cases like opal/util/arch.c
   testing for ompi_fortran_logical_t.
   As this is processor- and compiler-related information
   (e.g. does the compiler/architecture support REAL*16)
   this should have been on the OPAL layer.
 - Unifies f77 code using MPI_Flogical instead of opal_fortran_logical_t

 - Tested locally (Linux/x86-64) with mpich and intel testsuite
   but would like to get this week-ends MTT output


 - PLEASE NOTE: configure-internal macro-names and
   ompi_cv_ variables have not been changed, so that
   external platform (not in contrib/) files still work.

This commit was SVN r21330.
2009-05-30 15:54:29 +00:00
Nysal Jan
85773de539 Move 'multi-frag receive' fixes to csum PML
This commit was SVN r21323.
2009-05-29 08:07:33 +00:00
Rainer Keller
9ef87898e0 (originally, did not want to do this during business hours, but
well..)
 - As Jeff suggested, for m4 macros, dont use _ OPAL, but
   rather OPAL_ prefix
 - Set the variable before AC_SUBST, so that replacement happens
   in f77 header-file, too.

This commit was SVN r21316.
2009-05-28 20:28:43 +00:00
Jeff Squyres
f960f2d944 Fix compiler warning
This commit was SVN r21312.
2009-05-28 13:34:48 +00:00
George Bosilca
2f9765926e This is the real commit, the previous one was just a test ... to make
sure Jeff is reading all commits ;)

This commit was SVN r21308.
2009-05-28 00:49:40 +00:00
George Bosilca
63118c9beb Do not allow redefinition of MPI_MAX_DATAREP_STRING.
This commit was SVN r21307.
2009-05-28 00:37:19 +00:00
George Bosilca
be320ca959 Don't add the offset to all segments, only the first one should be affected. Thanks
to Roberto Ammendola for this bug report and patch.

This commit was SVN r21300.
2009-05-27 16:12:18 +00:00
Edgar Gabriel
d93def71ea second part of the 'running out of cids problem', this time focusing on what
happens when hierarch is used. . Two major items:
 - modify the comm_activate step to take an additional argument, indicating
 whether the new communicatio has to go through the collective selection
 step. This is not required sometimes (e.g. when a process calls
 MPI_COMM_SPLIT with color=MPI_UNDEFINED), and contributed significantly to
 the exhaustion of cids.
 - when freeing a communicator, check whether we can reuse the block of cids
 assigned to that comm. This only works if the current front of the cid
 assignment (cid_block_start) is right ater the block of cids assigned to this
 comm.

Fixes trac:1904
Fixes trac:1926

This commit was SVN r21296.

The following Trac tickets were found above:
  Ticket 1904 --> https://svn.open-mpi.org/trac/ompi/ticket/1904
  Ticket 1926 --> https://svn.open-mpi.org/trac/ompi/ticket/1926
2009-05-27 15:21:07 +00:00
Shiqing Fan
b3c077e112 Microsoft doesn't provide inet_pton and inet_ntop APIs on Windows XP, but only on Windows Vista and 2008. So add a stand alone version of inet_pton and inet_ntop functions from ISC.
This commit was SVN r21295.
2009-05-27 14:32:30 +00:00
Rainer Keller
fbb2834977 - Missed string.h to get rid of warnings...
This commit was SVN r21265.
2009-05-22 23:47:49 +00:00
Rainer Keller
225a1d6d8e - For memcpy and memset need string.h
This commit was SVN r21259.
2009-05-21 22:36:06 +00:00
George Bosilca
26342508de It is supposed not to be set until we detect our local rank ...
This commit was SVN r21256.
2009-05-20 17:41:13 +00:00
George Bosilca
7bd97ac17b Try to deal with the ticket #1831. I think we might reach a case where the
shm_fifos values are only partially updated, and this leads to wrong values
for the offset. Moving the write barrier at the right place, plus forcing
some read barriers might help.

In addition I get rid of the sm_offset array which is completely useless.

This commit was SVN r21253.
2009-05-19 22:50:44 +00:00
Jeff Squyres
8dc83b0865 Use the newer ORTE_NAME_PRINT instead of ORTE_NAME_ARGS
This commit was SVN r21250.
2009-05-18 14:38:13 +00:00