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Граф коммитов

5592 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
0042c758f1 Update the tools support so it allows tools to access PMIx
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-25 17:10:08 -07:00
Ralph Castain
af85e48dd7 Silence Coverity warning, silence pmix_error_log of success
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-21 15:33:16 -07:00
Ralph Castain
f7e8780a42 Remove fortran support from platform file
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-20 21:02:30 -07:00
Ralph Castain
b225366012 Bring the ofi/rml component online by completing the wireup protocol for the daemons. Cleanup the current confusion over how connection info gets created and
passed to make it all flow thru the opal/pmix "put/get" operations. Update the PMIx code to latest master to pickup some required behaviors.

Remove the no-longer-required get_contact_info and set_contact_info from the RML layer.

Add an MCA param to allow the ofi/rml component to route messages if desired. This is mainly for experimentation at this point as we aren't sure if routing wi
ll be beneficial at large scales. Leave it "off" by default.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-20 21:01:57 -07:00
Artem Polyakov
79c10c884d orte/pmix/server: Fix direct modex response with error status
`send_error()` is only packing status and peer info in the reply.
While remote counterpart in `pmix_server_dmdx_resp()` expects
the "hotel room number" to proceed correctly.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2017-07-20 23:50:57 +07:00
Gilles Gouaillardet
60aa9cfcb6 hwloc: add support for hwloc v2 API
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-20 17:39:44 +09:00
Gilles Gouaillardet
9f29f3bff4 hwloc: since WHOLE_SYSTEM is no more used, remove useless
checks related to offline and disallowed elements

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-20 17:39:21 +09:00
Gilles Gouaillardet
1a34224948 hwloc: do not set the HWLOC_TOPOLOGY_FLAG_WHOLE_SYSTEM flag
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-20 17:39:16 +09:00
Ralph Castain
fca68b070b Merge pull request #3934 from rhc54/topic/singleton
Fix the isolated pmix component. Cleanup the ess/singleton component …
2017-07-19 16:02:37 -05:00
Ralph Castain
543c16b28d Fix the isolated pmix component. Cleanup the ess/singleton component - we shouldn't be automatically discovering the local topology as that is now done on-demand.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-19 12:14:29 -07:00
Geoffrey Paulsen
71333a4b14 Transitioning ownership of rmaps/seq and rmaps/rank_file from Intel to IBM. 2017-07-18 21:31:01 -04:00
Gilles Gouaillardet
da34e2f109 ess/base: silence a warning
by fixing a static initializer

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-19 09:30:53 +09:00
Ralph Castain
8a98aab6cc Fix signal forwarding on ORTE daemons so that _all_ daemons do it, regardless of environment. Add missing support for SIGTSTP and a few others.
Thanks to Eugene Dedits for reporting the problem.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-18 09:58:55 -07:00
Jeff Squyres
ccf17808b6 Merge pull request #3258 from markalle/pr/symbol_name_pollution
symbol name pollution
2017-07-12 16:19:25 -05:00
Artem Polyakov
832f1b03a4 Merge pull request #3790 from artpol84/orte/iof_sbatch
orte/iof: Address the case when output is a regular file
2017-07-12 09:38:01 -05:00
Gilles Gouaillardet
626e94b689 oob/tcp: make mca_oob_tcp_msg_type_t an uint8_t
so no conversion is required when heterogeneous mode is enabled

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-12 10:27:45 +09:00
Mark Allen
552216f9ba scripted symbol name change (ompi_ prefix)
Passed the below set of symbols into a script that added ompi_ to them all.

Note that if processing a symbol named "foo" the script turns
    foo  into  ompi_foo
but doesn't turn
    foobar  into  ompi_foobar

But beyond that the script is blind to C syntax, so it hits strings and
comments etc as well as vars/functions.

    coll_base_comm_get_reqs
    comm_allgather_pml
    comm_allreduce_pml
    comm_bcast_pml
    fcoll_base_coll_allgather_array
    fcoll_base_coll_allgatherv_array
    fcoll_base_coll_bcast_array
    fcoll_base_coll_gather_array
    fcoll_base_coll_gatherv_array
    fcoll_base_coll_scatterv_array
    fcoll_base_sort_iovec
    mpit_big_lock
    mpit_init_count
    mpit_lock
    mpit_unlock
    netpatterns_base_err
    netpatterns_base_verbose
    netpatterns_cleanup_narray_knomial_tree
    netpatterns_cleanup_recursive_doubling_tree_node
    netpatterns_cleanup_recursive_knomial_allgather_tree_node
    netpatterns_cleanup_recursive_knomial_tree_node
    netpatterns_init
    netpatterns_register_mca_params
    netpatterns_setup_multinomial_tree
    netpatterns_setup_narray_knomial_tree
    netpatterns_setup_narray_tree
    netpatterns_setup_narray_tree_contigous_ranks
    netpatterns_setup_recursive_doubling_n_tree_node
    netpatterns_setup_recursive_doubling_tree_node
    netpatterns_setup_recursive_knomial_allgather_tree_node
    netpatterns_setup_recursive_knomial_tree_node
    pml_v_output_close
    pml_v_output_open
    intercept_extra_state_t
    odls_base_default_wait_local_proc
    _event_debug_mode_on
    _evthread_cond_fns
    _evthread_id_fn
    _evthread_lock_debugging_enabled
    _evthread_lock_fns
    cmd_line_option_t
    cmd_line_param_t
    crs_base_self_checkpoint_fn
    crs_base_self_continue_fn
    crs_base_self_restart_fn
    event_enable_debug_output
    event_global_current_base_
    event_module_include
    eventops
    sync_wait_mt
    trigger_user_inc_callback
    var_type_names
    var_type_sizes

Signed-off-by: Mark Allen <markalle@us.ibm.com>
2017-07-11 02:13:23 -04:00
Mark Allen
efc25168cd symbol name pollution: making some vars static
As part of addressing symbol name pollution, I'm switching a few
vars/functions to static.

Signed-off-by: Mark Allen <markalle@us.ibm.com>
2017-07-11 02:13:22 -04:00
Gilles Gouaillardet
823382f5d7 plm/base: do not abort when configure'd with --enable-heterogeneous
and a mix of BE/LE is detected

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-07-07 10:43:54 +09:00
Ralph Castain
2a580fa71e Merge pull request #3801 from rhc54/topic/hetero
Detect that we have a mix of BE/LE in the system
2017-07-06 15:29:06 -07:00
Ralph Castain
8979bfe71e Silence Coverity warnings
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-06 06:07:28 -07:00
anandhi
793ebc272e When opening conduit, checking for the transport preference in below order -
(1) rml_ofi_transports mca parameter.  This parameter should have the list of transports (currently ethernet,fabric are valid)
    fabric is higher priority if provided.
(2) ORTE_RML_TRANSPORT_TYPE key with values "ethernet" or "fabric". "fabric" is higher priority.
If specific provider is required use ORTE_RML_OFI_PROV_NAME key with values "socket" or "OPA" or any other supported in system.

	modified:   ../orte/mca/rml/ofi/rml_ofi.h
	modified:   ../orte/mca/rml/ofi/rml_ofi_component.c
	modified:   ../orte/mca/rml/ofi/rml_ofi_send.c

On send_msg choose the provider on local and peer to follow below rules -
1. if the user specified the transport for this conduit (even giving us a prioritized list of candidates), then the one we selected is the _only_ one we will use. If the remote peer has a matching endpoint, then we use it - otherwise, we error out

2. if the user didn't specify a transport, then we look for matches against _all_ of our available transports, starting with fabric and then going to Ethernet, taking the first one that matches.

3. if we can't find any match, then we error out

	modified:   ../orte/mca/rml/ofi/rml_ofi.h
	modified:   ../orte/mca/rml/ofi/rml_ofi_component.c
	modified:   ../orte/mca/rml/ofi/rml_ofi_send.c

send_msg() -> Fixed case when the local provider chosen at time of opening conduit
is not present in peer (destination) node
	modified:   ../orte/mca/rml/ofi/rml_ofi.h
	modified:   ../orte/mca/rml/ofi/rml_ofi_send.c

When opening conduit, checking for the transport preference in below order -

(1) rml_ofi_transports mca parameter.  This parameter should have the list of transports (currently ethernet,fabric are valid)
    fabric is higher priority if provided.
(2) ORTE_RML_TRANSPORT_TYPE key with values "ethernet" or "fabric". "fabric" is higher priority.
If specific provider is required use ORTE_RML_OFI_PROV_NAME key with values "socket" or "OPA" or any other supported in system.

	modified:   ../orte/mca/rml/ofi/rml_ofi.h
	modified:   ../orte/mca/rml/ofi/rml_ofi_component.c
	modified:   ../orte/mca/rml/ofi/rml_ofi_send.c

On send_msg choose the provider on local and peer to follow below rules -
1. if the user specified the transport for this conduit (even giving us a prioritized list of candidates), then the one we selected is the _only_ one we will use. If the remote peer has a matching endpoint, then we use it - otherwise, we error out

2. if the user didn't specify a transport, then we look for matches against _all_ of our available transports, starting with fabric and then going to Ethernet, taking the first one that matches.

3. if we can't find any match, then we error out

	modified:   ../orte/mca/rml/ofi/rml_ofi.h
	modified:   ../orte/mca/rml/ofi/rml_ofi_component.c
	modified:   ../orte/mca/rml/ofi/rml_ofi_send.c

send_msg() -> Fixed case when the local provider chosen at time of opening conduit
is not present in peer (destination) node
	modified:   ../orte/mca/rml/ofi/rml_ofi.h
	modified:   ../orte/mca/rml/ofi/rml_ofi_send.c

Signed-off-by: Anandhi Jayakumar <anandhi.s.jayakumar@intel.com>
2017-07-05 15:40:14 -07:00
Ralph Castain
2753f53e6d Detect that we have a mix of BE/LE in the system, provide a warning that OMPI doesn't currently support this environment, and error out
Fixes #2817

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-03 15:47:05 -07:00
Artem Polyakov
374c824a5c orte/iof: Generalize the fix related to always-ready fds
Reference: https://bugzilla.kernel.org/show_bug.cgi?id=15272.
Work with both stdin/stdout fds that are known to be always
ready using libevent timers.
Such fds can not be effectively used with non-blocking I/O
functions like epoll, poll, select:
- for poll/select the event will be triggered immediately;
- for epoll `epoll_ctl` will reject an attempt to add this
fd to the working set.

Reference: http://www.wangafu.net/~nickm/libevent-book/Ref4_event.html
Libevent suggests to use timers over event_active for the
reasons provided by the link above.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2017-07-01 02:24:14 +07:00
Artem Polyakov
d9ad918a14 orte/iof: Address the case when output is a regular file
Regular files are always write-ready, so non-blocking I/O does not
give any benefits for them.
More than that - if libevent is using "epoll" to track fd events,
epoll_ctl will refuse attempt to add an fd pointing to a regular
file descriptor with EPERM.
This fix checks the object referenced by fd and avoids event_add
using event_active instead.

In the original configuration that uncovered this issue "epoll"
was used in libevent, it was triggering the following warning
message:
"[warn] Epoll ADD(1) on fd 0 failed.  Old events were 0; read
change was 1 (add); write change was 0 (none): Operation not
permitted"
And the side effect was accumulation of all output in mpirun
memory and actually writing it only at mpirun exit.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2017-07-01 02:24:14 +07:00
Ralph Castain
7cbea77238 Merge pull request #3778 from rhc54/topic/warn
Attempt to detect when we are direct-launched without the necessary P…
2017-06-29 16:53:12 -07:00
Ralph Castain
85f8eb4c6b Stop all progress threads prior to releasing the peer objects to avoid a race condition whereby a lost connection could be reported after a peer object was freed and before the threads were stopped.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-29 15:48:18 -07:00
Ralph Castain
bd4a6fee22 Attempt to detect when we are direct-launched without the necessary PMI support, and thus are incorrectly identified as being "singleton". Advise the user on the required PMI(x) support and error out.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-29 15:26:53 -07:00
Ralph Castain
9178219e6b Deregister event handlers only on final call to finalize. Ensure we pass PMIx mca params
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-28 15:00:43 -07:00
Ralph Castain
c6c0258cd8 Need to signal -pgrp to get to all members of a process group.
Thanks to Ted Sussman for the report and patience in tracking it down

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-27 12:10:34 -07:00
Ralph Castain
8a4565874e Enable ORTE to continue running when a node fails - user takes responsibility for zombies. Minor cleanup to orte-clean
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-27 09:05:26 -07:00
Ralph Castain
6e2778ad3b Silence coverity warnings, correctly transfer the endpoint blob bytes
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-26 08:32:06 -07:00
Ralph Castain
9dad3f7cbf Add the modex code to combine all info from local providers into a single modex send, and then retrieve them on recv
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-25 07:24:29 -07:00
Ralph Castain
f4411c4393 Enable use of OFI fabrics for launch and other collective operations. Update the PMIx repo to the latest master to get the required support for the server to "push" modex info, and to retrieve all its own "modex" values for sending back to mpirun. Have mpirun cache them in its local modex hash as OFI goes point-to-point direct and doesn't route - so the remote daemons don't need a copy of this connection info.
Remove the opal_ignore from the RML/OFI component, but disable that component unless the user specifically requests it via the "rml_ofi_desired=1" MCA param. This will let us test compile in various environments without interfering with operations while we continue to debug

Fix an error when computing the number of infos during server init

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-23 19:57:21 -07:00
Ralph Castain
168e50bc13 Also need to avoid calling destruct on the opal_process_info struct after finalize
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-23 07:49:14 -07:00
Ralph Castain
3af9344764 Remove stale field
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-23 06:22:31 -07:00
Ralph Castain
38636f4f0a Ensure we properly cleanup on termination, including when terminating due to ctrl-c
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-21 06:33:37 -07:00
Ralph Castain
2aa286c9d0 Update orte-clean so it cleans legacy session directories as well as pmix artifacts
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-20 17:46:39 -07:00
Ralph Castain
501ba8faad Merge pull request #3704 from rhc54/topic/signal
Control distribution of signals to children vs grandchildren
2017-06-20 11:11:43 -07:00
Ralph Castain
952726c121 Update to latest PMIx master - equivalent to 2.0rc2. Update the thread support in the opal/pmix framework to protect the framework-level structures.
This now passes the loop test, and so we believe it resolves the random hangs in finalize.

Changes in PMIx master that are included here:

* Fixed a bug in the PMIx_Get logic
* Fixed self-notification procedure
* Made pmix_output functions thread safe
* Fixed a number of thread safety issues
* Updated configury to use 'uname -n' when hostname is unavailable

Work on cleaning up the event handler thread safety problem
Rarely used functions, but protect them anyway
Fix the last part of the intercomm problem
Ensure we don't cover any PMIx calls with the framework-level lock.
Protect against NULL argv comm_spawn

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-20 09:02:15 -07:00
Ralph Castain
206aec6083 By default, apply signals to all direct children _and_ any children they might have spawned (so long as they remain in the same process group). Provide an MCA param (odls_base_signal_direct_children_only) to indicate that the signal is to go _only_ to our direct children, and not be delivered to any children spawned by those procs.
Refs https://www.mail-archive.com/users@lists.open-mpi.org/msg31221.html

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-15 12:26:11 -07:00
Ralph Castain
8f09929469 Fix rank-file mapper launch by correctly setting up the remote map from the provided data
Put a simple protection for the case where procs fail while we are trying to deregister handlers

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-15 08:33:29 -07:00
Ralph Castain
8afa1433b8 Only set the "bound" flag if we wre actually bound
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-14 13:22:01 -07:00
Gilles Gouaillardet
72c7329462 configury: use 'uname -n' when 'hostname' is not available
the 'hostname' command might not be available on some platforms
such as Fedora Core 26, so mimick config/libtool.m4 and fallback
to 'uname -n' if needed

Refs. #3680

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-06-12 15:04:32 +09:00
Ralph Castain
1f0f03b45b Print a better error message when srun isn't found in the path. Ensure we don't segfault if -host specifies a node not included in the allocation
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-09 07:46:47 -07:00
Ralph Castain
00ba6a1be6 Protect against NULL topology
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-08 20:56:44 -07:00
Ralph Castain
7b39f19f60 Fix the backend mapper algorithm for comm_spawn. The front and back ends need to get the nodes into the job map in the same order so that the ranking algorithms will reach the same results
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-08 08:00:52 -07:00
Ralph Castain
81ab79f311 Ensure the orted doesn't go into an infinite loop during force-terminate
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-07 21:44:49 -07:00
Ralph Castain
7002535059 Merge pull request #3671 from rhc54/topic/ofi
We cannot use OFI to determine when daemons can finalize as we don't …
2017-06-07 15:08:56 -07:00
George Bosilca
484004b03d
simple_spawn should be independent of ORTE. 2017-06-07 17:51:46 -04:00