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Граф коммитов

13 Коммитов

Автор SHA1 Сообщение Дата
Gilles Gouaillardet
11e5f86bf8 mpool/base: plug a memory leak
set the key of all mpool_tree_item objects, so they can be retrieved
in mpool_base_free and then returned back to the
mca_mpool_base_tree_item_free_list free list.

Refs. open-mpi/ompi#4567

Thanks Philip Blakely for the bug report.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-12-07 09:06:25 +09:00
Ben Menadue
90fa8af10b Use correct alignment request in mca_mpool_base_alloc.
Signed-off-by: Ben Menadue <ben.menadue@nci.org.au>
2017-12-06 07:02:17 +11:00
Mark Allen
482d84b6e5 fixes for Dave's get/set info code
The expected sequence of events for processing info during object creation
is that if there's an incoming info arg, it is opal_info_dup()ed into the obj
at obj->s_info first. Then interested components register callbacks for
keys they want to know about using opal_infosubscribe_infosubscribe().

Inside info_subscribe_subscribe() the specified callback() is called with
whatever matching k/v is in the object's info, or with the default. The
return string from the callback goes into the new k/v stored in info, and
the input k/v is saved as __IN_<key>/<val>. It's saved the same way
whether the input came from info or whether it was a default. A null return
from the callback indicates an ignored key/val, and no k/v is stored for
it, but an __IN_<key>/<val> is still kept so we still have access to the
original.

At MPI_*_set_info() time, opal_infosubscribe_change_info() is used. That
function calls the registered callbacks for each item in the provided info.
If the callback returns non-null, the info is updated with that k/v, or if
the callback returns null, that key is deleted from info. An __IN_<key>/<val>
is saved either way, and overwrites any previously saved value.

When MPI_*_get_info() is called, opal_info_dup_mpistandard() is used, which
allows relatively easy changes in interpretation of the standard, by looking
at both the <key>/<val> and __IN_<key>/<val> in info. Right now it does
  1. includes system extras, eg k/v defaults not expliclty set by the user
  2. omits ignored keys
  3. shows input values, not callback modifications, eg not the internal values

Currently the callbacks are doing things like
    return some_condition ? "true" : "false"
that is, returning static strings that are not to be freed. If the return
strings start becoming more dynamic in the future I don't see how unallocated
strings could support that, so I'd propose a change for the future that
the callback()s registered with info_subscribe_subscribe() do a strdup on
their return, and we change the callers of callback() to free the strings
it returns (there are only two callers).

Rough outline of the smaller changes spread over the less central files:
  comm.c
    initialize comm->super.s_info to NULL
    copy into comm->super.s_info in comm creation calls that provide info
    OBJ_RELEASE comm->super.s_info at free time
  comm_init.c
    initialize comm->super.s_info to NULL
  file.c
    copy into file->super.s_info if file creation provides info
    OBJ_RELEASE file->super.s_info at free time
  win.c
    copy into win->super.s_info if win creation provides info
    OBJ_RELEASE win->super.s_info at free time

  comm_get_info.c
  file_get_info.c
  win_get_info.c
    change_info() if there's no info attached (shouldn't happen if callbacks
      are registered)
    copy the info for the user

The other category of change is generally addressing compiler warnings where
ompi_info_t and opal_info_t were being used a little too interchangably. An
ompi_info_t* contains an opal_info_t*, at &(ompi_info->super)

Also this commit updates the copyrights.

Signed-off-by: Mark Allen <markalle@us.ibm.com>
2017-05-17 01:12:49 -04:00
David Solt
50aa143ab6 Major structural changes to data types: .super infosubscriber
ompi_communicator_t, ompi_win_t, ompi_file_t all have a super class of type opal_infosubscriber_t instead of a base/super type of opal_object_t (in previous code comm used c_base, but file used super).  It may be a bit bold to say that being a subscriber of MPI_Info is the foundational piece that ties these three things together, but if you object, then I would prefer to turn infosubscriber into a more general name that encompasses other common features rather than create a different super class.  The key here is that we want to be able to pass comm, win and file objects as if they were opal_infosubscriber_t, so that one routine can heandle all 3 types of objects being passed to it.

MPI_INFO_NULL is still an ompi_predefined_info_t type since an MPI_Info is part of ompi but the internal details of the underlying information concept is part of opal.

An ompi_info_t type still exists for exposure to the user, but it is simply a wrapper for the opal object.

Routines such as ompi_info_dup, etc have all been moved to opal_info_dup and related to the opal directory.

Fortran to C translation tables are only used for MPI_Info that is exposed to the application and are therefore part of the ompi_info_t and not the opal_info_t

The data structure changes are primarily in the following files:

    communicator/communicator.h
    ompi/info/info.h
    ompi/win/win.h
    ompi/file/file.h

The following new files were created:

    opal/util/info.h
    opal/util/info.c
    opal/util/info_subscriber.h
    opal/util/info_subscriber.c

This infosubscriber concept is that communicators, files and windows can have subscribers that subscribe to any changes in the info associated with the comm/file/window.  When xxx_set_info is called, the new info is presented to each subscriber who can modify the info in any way they want.  The new value is presented to the next subscriber and so on until all subscribers have had a chance to modify the value.  Therefore, the order of subscribers can make a difference but we hope that there is generally only one subscriber that cares or modifies any given key/value pair.  The final info is then stored and returned by a call to xxx_get_info.

The new model can be seen in the following files:

    ompi/mpi/c/comm_get_info.c
    ompi/mpi/c/comm_set_info.c
    ompi/mpi/c/file_get_info.c
    ompi/mpi/c/file_set_info.c
    ompi/mpi/c/win_get_info.c
    ompi/mpi/c/win_set_info.c

The current subscribers where changed as follows:

    mca/io/ompio/io_ompio_file_open.c
    mca/io/ompio/io_ompio_module.c
    mca/osc/rmda/osc_rdma_component.c (This one actually subscribes to "no_locks")
    mca/osc/sm/osc_sm_component.c (This one actually subscribes to "blocking_fence" and "alloc_shared_contig")

Signed-off-by: Mark Allen <markalle@us.ibm.com>

Conflicts:
	AUTHORS
	ompi/communicator/comm.c
	ompi/debuggers/ompi_mpihandles_dll.c
	ompi/file/file.c
	ompi/file/file.h
	ompi/info/info.c
	ompi/mca/io/ompio/io_ompio.h
	ompi/mca/io/ompio/io_ompio_file_open.c
	ompi/mca/io/ompio/io_ompio_file_set_view.c
	ompi/mca/osc/pt2pt/osc_pt2pt.h
	ompi/mca/sharedfp/addproc/sharedfp_addproc.h
	ompi/mca/sharedfp/addproc/sharedfp_addproc_file_open.c
	ompi/mca/topo/treematch/topo_treematch_dist_graph_create.c
	ompi/mpi/c/lookup_name.c
	ompi/mpi/c/publish_name.c
	ompi/mpi/c/unpublish_name.c
	opal/mca/mpool/base/mpool_base_alloc.c
	opal/util/Makefile.am
2017-05-12 14:41:05 -04:00
Nathan Hjelm
d4afb16f5a opal: rework mpool and rcache frameworks
This commit rewrites both the mpool and rcache frameworks. Summary of
changes:

 - Before this change a significant portion of the rcache
   functionality lived in mpool components. This meant that it was
   impossible to add a new memory pool to use with rdma networks
   (ugni, openib, etc) without duplicating the functionality of an
   existing mpool component. All the registration functionality has
   been removed from the mpool and placed in the rcache framework.

 - All registration cache mpools components (udreg, grdma, gpusm,
   rgpusm) have been changed to rcache components. rcaches are
   allocated and released in the same way mpool components were.

 - It is now valid to pass NULL as the resources argument when
   creating an rcache. At this time the gpusm and rgpusm components
   support this. All other rcache components require non-NULL
   resources.

 - A new mpool component has been added: hugepage. This component
   supports huge page allocations on linux.

 - Memory pools are now allocated using "hints". Each mpool component
   is queried with the hints and returns a priority. The current hints
   supported are NULL (uses posix_memalign/malloc), page_size=x (huge
   page mpool), and mpool=x.

 - The sm mpool has been moved to common/sm. This reflects that the sm
   mpool is specialized and not meant for any general
   allocations. This mpool may be moved back into the mpool framework
   if there is any objection.

 - The opal_free_list_init arguments have been updated. The unused0
   argument is not used to pass in the registration cache module. The
   mpool registration flags are now rcache registration flags.

 - All components have been updated to make use of the new framework
   interfaces.

As this commit makes significant changes to both the mpool and rcache
frameworks both versions have been bumped to 3.0.0.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-03-14 10:50:41 -06:00
Nathan Hjelm
59aa93e1b6 opal/mpool: add support for passing access flags to register
This commit adds a access_flags argument to the mpool registration
function. This flag indicates what kind of access is being requested:
local write, remote read, remote write, and remote atomic. The values
of the registration access flags in the btl are tied to the new flags
in the mpool. All mpools have been updated to include the new argument
but only the grdma and udreg mpools have been updated to make use of
the access flags. In both mpools existing registrations are checked
for sufficient access before being returned. If a registration does
not contain sufficient access it is marked as invalid and a new
registration is generated.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-05 13:53:55 -06:00
Nathan Hjelm
4d92c9989e more c99 updates
This commit does two things. It removes checks for C99 required
headers (stdlib.h, string.h, signal.h, etc). Additionally it removes
definitions for required C99 types (intptr_t, int64_t, int32_t, etc).

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-25 10:14:13 -06:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Nathan Hjelm
5f1254d710 Update code base to use the new opal_free_list_t
Use of the old ompi_free_list_t and ompi_free_list_item_t is
deprecated. These classes will be removed in a future commit.

This commit updates the entire code base to use opal_free_list_t and
opal_free_list_item_t.

Notes:

OMPI_FREE_LIST_*_MT -> opal_free_list_* (uses opal_using_threads ())

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-02-24 10:05:45 -07:00
Ralph Castain
9500939042 Fix abstraction violation
This commit was SVN r32655.
2014-08-31 08:06:35 +00:00
Ralph Castain
552c9ca5a0 George did the work and deserves all the credit for it. Ralph did the merge, and deserves whatever blame results from errors in it :-)
WHAT:    Open our low-level communication infrastructure by moving all necessary components (btl/rcache/allocator/mpool) down in OPAL

All the components required for inter-process communications are currently deeply integrated in the OMPI layer. Several groups/institutions have express interest in having a more generic communication infrastructure, without all the OMPI layer dependencies.  This communication layer should be made available at a different software level, available to all layers in the Open MPI software stack. As an example, our ORTE layer could replace the current OOB and instead use the BTL directly, gaining access to more reactive network interfaces than TCP.  Similarly, external software libraries could take advantage of our highly optimized AM (active message) communication layer for their own purpose.  UTK with support from Sandia, developped a version of Open MPI where the entire communication infrastucture has been moved down to OPAL (btl/rcache/allocator/mpool). Most of the moved components have been updated to match the new schema, with few exceptions (mainly BTLs where I have no way of compiling/testing them). Thus, the completion of this RFC is tied to being able to completing this move for all BTLs. For this we need help from the rest of the Open MPI community, especially those supporting some of the BTLs.  A non-exhaustive list of BTLs that qualify here is: mx, portals4, scif, udapl, ugni, usnic.

This commit was SVN r32317.
2014-07-26 00:47:28 +00:00
Jeff Squyres
959a08bf42 Compromise:
- move mpool and allocator frameworks back to ompi (from opal)
- specialize the ompi_free_list class to use an mpool instance
- un-specialize opal_free_list to *not* use mpool; just use malloc/free

This commit was SVN r6292.
2005-07-02 15:35:34 +00:00
Jeff Squyres
3a9179a0d7 Initial population of the opal tree
This commit was SVN r6267.
2005-07-02 13:43:20 +00:00