fs/base: move redundant code to fs/base
moving some code from fs/ufs into fs/base. The benefit of this approach is that fs components that are fundamentally based on posix I/O (and only differ in some non-posix functionality such as setting stripe size, or which hints are being supported) can avoid having to replicate the same code over and over again. First beneficiary is the lustre fs component, but more are to follow soon. Signed-off-by: Edgar Gabriel <egabriel@central.uh.edu>
Этот коммит содержится в:
Edgar Gabriel
родитель
c1ac0c00c5
Коммит
d191ed6b4f
@ -25,4 +25,9 @@ libmca_fs_la_SOURCES += \
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base/fs_base_file_select.c \
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base/fs_base_file_unselect.c \
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base/fs_base_find_available.c \
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base/fs_base_get_parent_dir.c
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base/fs_base_get_parent_dir.c \
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base/fs_base_file_close.c \
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base/fs_base_file_sync.c \
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base/fs_base_file_delete.c \
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base/fs_base_file_set_size.c \
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base/fs_base_file_get_size.c
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@ -10,7 +10,7 @@
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2008 Cisco Systems, Inc. All rights reserved.
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* Copyright (c) 2008-2011 University of Houston. All rights reserved.
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||||
* Copyright (c) 2008-2018 University of Houston. All rights reserved.
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* Copyright (c) 2018 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
|
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* $COPYRIGHT$
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@ -52,6 +52,13 @@ OMPI_DECLSPEC int mca_fs_base_init_file (struct ompio_file_t *file);
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OMPI_DECLSPEC int mca_fs_base_get_param (struct ompio_file_t *file, int keyval);
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OMPI_DECLSPEC void mca_fs_base_get_parent_dir (char *filename, char **dirnamep);
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OMPI_DECLSPEC int mca_fs_base_get_fstype(char *fname);
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OMPI_DECLSPEC int mca_fs_base_file_delete (char* file_name, struct opal_info_t *info);
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OMPI_DECLSPEC int mca_fs_base_file_sync (ompio_file_t *fh);
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OMPI_DECLSPEC int mca_fs_base_file_get_size (ompio_file_t *fh, OMPI_MPI_OFFSET_TYPE *size);
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OMPI_DECLSPEC int mca_fs_base_file_set_size (ompio_file_t *fh, OMPI_MPI_OFFSET_TYPE size);
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OMPI_DECLSPEC int mca_fs_base_file_close (ompio_file_t *fh);
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/*
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* Globals
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*/
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@ -9,7 +9,7 @@
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2008-2011 University of Houston. All rights reserved.
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* Copyright (c) 2008-2018 University of Houston. All rights reserved.
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* Copyright (c) 2018 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
|
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* $COPYRIGHT$
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@ -21,7 +21,7 @@
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#include "ompi_config.h"
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#include "fs_ufs.h"
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#include "base.h"
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#include <fcntl.h>
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#include <unistd.h>
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@ -36,8 +36,7 @@
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* Accepts: - file handle
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* Returns: - Success if file closed
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*/
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int
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mca_fs_ufs_file_close (ompio_file_t *fh)
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int mca_fs_base_file_close (ompio_file_t *fh)
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{
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fh->f_comm->c_coll->coll_barrier (fh->f_comm,
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fh->f_comm->c_coll->coll_barrier_module);
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@ -9,7 +9,7 @@
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2008-2011 University of Houston. All rights reserved.
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* Copyright (c) 2008-2018 University of Houston. All rights reserved.
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* Copyright (c) 2016-2017 IBM Corporation. All rights reserved.
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* $COPYRIGHT$
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*
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@ -20,7 +20,8 @@
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#include "ompi_config.h"
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#include "fs_ufs.h"
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#include "base.h"
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#include <unistd.h>
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#include "mpi.h"
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@ -34,9 +35,8 @@
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* Accepts: - file name & info
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* Returns: - Success if file closed
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*/
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int
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mca_fs_ufs_file_delete (char* file_name,
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struct opal_info_t *info)
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int mca_fs_base_file_delete (char* file_name,
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struct opal_info_t *info)
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{
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int ret;
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@ -9,7 +9,7 @@
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2008-2011 University of Houston. All rights reserved.
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* Copyright (c) 2008-2018 University of Houston. All rights reserved.
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* Copyright (c) 2018 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
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@ -21,8 +21,7 @@
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#include "ompi_config.h"
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#include "fs_ufs.h"
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#include "base.h"
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/mca/fs/fs.h"
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@ -34,11 +33,10 @@
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*
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* Function: - get_size of a file
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* Accepts: - same arguments as MPI_File_get_size()
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* Returns: - Success if size is get
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* Returns: - Success if size is retrieved
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*/
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int
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mca_fs_ufs_file_get_size (ompio_file_t *fh,
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OMPI_MPI_OFFSET_TYPE *size)
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int mca_fs_base_file_get_size (ompio_file_t *fh,
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OMPI_MPI_OFFSET_TYPE *size)
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{
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*size = lseek(fh->fd, 0, SEEK_END);
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if (-1 == *size) {
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@ -9,7 +9,7 @@
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
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* Copyright (c) 2008-2018 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
||||
* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
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@ -21,7 +21,7 @@
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#include "ompi_config.h"
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#include "fs_ufs.h"
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#include "base.h"
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#include "mpi.h"
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#include "ompi/constants.h"
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@ -36,8 +36,7 @@
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* Accepts: - same arguments as MPI_File_set_size()
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* Returns: - Success if size is set
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*/
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int
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mca_fs_ufs_file_set_size (ompio_file_t *fh,
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int mca_fs_base_file_set_size (ompio_file_t *fh,
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OMPI_MPI_OFFSET_TYPE size)
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{
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int err = 0;
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@ -9,7 +9,7 @@
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
|
||||
* Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2008-2018 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
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* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
|
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@ -21,15 +21,15 @@
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#include "ompi_config.h"
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#include "fs_ufs.h"
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#include "base.h"
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#include <unistd.h>
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/mca/fs/fs.h"
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int
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mca_fs_ufs_file_sync (ompio_file_t *fh)
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int mca_fs_base_file_sync (ompio_file_t *fh)
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{
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int err;
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@ -9,7 +9,7 @@
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# University of Stuttgart. All rights reserved.
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# Copyright (c) 2004-2005 The Regents of the University of California.
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# All rights reserved.
|
||||
# Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
||||
# Copyright (c) 2008-2018 University of Houston. All rights reserved.
|
||||
# Copyright (c) 2017 IBM Corporation. All rights reserved.
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# $COPYRIGHT$
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#
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@ -36,12 +36,7 @@ fs_lustre_sources = \
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fs_lustre.h \
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fs_lustre.c \
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fs_lustre_component.c \
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fs_lustre_file_open.c \
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fs_lustre_file_close.c \
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fs_lustre_file_delete.c \
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fs_lustre_file_sync.c \
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fs_lustre_file_set_size.c \
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fs_lustre_file_get_size.c
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fs_lustre_file_open.c
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AM_CPPFLAGS = $(fs_lustre_CPPFLAGS)
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@ -9,7 +9,7 @@
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* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
* Copyright (c) 2008-2017 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2008-2018 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
||||
* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
|
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@ -55,11 +55,11 @@ static mca_fs_base_module_1_0_0_t lustre = {
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mca_fs_lustre_module_init, /* initalise after being selected */
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mca_fs_lustre_module_finalize, /* close a module on a communicator */
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mca_fs_lustre_file_open,
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mca_fs_lustre_file_close,
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mca_fs_lustre_file_delete,
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mca_fs_lustre_file_set_size,
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mca_fs_lustre_file_get_size,
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mca_fs_lustre_file_sync
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mca_fs_base_file_close,
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mca_fs_base_file_delete,
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mca_fs_base_file_set_size,
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mca_fs_base_file_get_size,
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mca_fs_base_file_sync
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};
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/*
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* *******************************************************************
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@ -1,46 +0,0 @@
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/*
|
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
|
||||
* University Research and Technology
|
||||
* Corporation. All rights reserved.
|
||||
* Copyright (c) 2004-2017 The University of Tennessee and The University
|
||||
* of Tennessee Research Foundation. All rights
|
||||
* reserved.
|
||||
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
|
||||
* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
* Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
||||
* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
|
||||
*
|
||||
* Additional copyrights may follow
|
||||
*
|
||||
* $HEADER$
|
||||
*/
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#include "ompi_config.h"
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#include "fs_lustre.h"
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#include <fcntl.h>
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#include <unistd.h>
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/mca/fs/fs.h"
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/*
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* file_close_lustre
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*
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* Function: - closes a new file
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* Accepts: - file handle
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* Returns: - Success if file closed
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*/
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int
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mca_fs_lustre_file_close (ompio_file_t *fh)
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{
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fh->f_comm->c_coll->coll_barrier (fh->f_comm,
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fh->f_comm->c_coll->coll_barrier_module);
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close (fh->fd);
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return OMPI_SUCCESS;
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}
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@ -1,49 +0,0 @@
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/*
|
||||
* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
|
||||
* University Research and Technology
|
||||
* Corporation. All rights reserved.
|
||||
* Copyright (c) 2004-2011 The University of Tennessee and The University
|
||||
* of Tennessee Research Foundation. All rights
|
||||
* reserved.
|
||||
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
|
||||
* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
* Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2016-2017 IBM Corporation. All rights reserved.
|
||||
* $COPYRIGHT$
|
||||
*
|
||||
* Additional copyrights may follow
|
||||
*
|
||||
* $HEADER$
|
||||
*/
|
||||
|
||||
|
||||
#include "ompi_config.h"
|
||||
#include "fs_lustre.h"
|
||||
#include <unistd.h>
|
||||
|
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#include "mpi.h"
|
||||
#include "ompi/constants.h"
|
||||
#include "ompi/mca/fs/fs.h"
|
||||
|
||||
/*
|
||||
* file_delete_lustre
|
||||
*
|
||||
* Function: - deletes a file
|
||||
* Accepts: - file name & info
|
||||
* Returns: - Success if file closed
|
||||
*/
|
||||
int
|
||||
mca_fs_lustre_file_delete (char* file_name,
|
||||
struct opal_info_t *info)
|
||||
{
|
||||
int ret;
|
||||
|
||||
ret = unlink(file_name);
|
||||
if (0 > ret) {
|
||||
return OMPI_ERROR;
|
||||
}
|
||||
|
||||
return OMPI_SUCCESS;
|
||||
}
|
||||
@ -1,52 +0,0 @@
|
||||
/*
|
||||
* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
|
||||
* University Research and Technology
|
||||
* Corporation. All rights reserved.
|
||||
* Copyright (c) 2004-2011 The University of Tennessee and The University
|
||||
* of Tennessee Research Foundation. All rights
|
||||
* reserved.
|
||||
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
|
||||
* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
* Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
||||
* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
|
||||
*
|
||||
* Additional copyrights may follow
|
||||
*
|
||||
* $HEADER$
|
||||
*/
|
||||
|
||||
|
||||
#include "ompi_config.h"
|
||||
#include "fs_lustre.h"
|
||||
|
||||
#include "mpi.h"
|
||||
#include "ompi/constants.h"
|
||||
#include "ompi/mca/fs/fs.h"
|
||||
|
||||
/*
|
||||
* file_get_size_lustre
|
||||
*
|
||||
* Function: - get_size of a file
|
||||
* Accepts: - same arguments as MPI_File_get_size()
|
||||
* Returns: - Success if size is get
|
||||
*/
|
||||
int
|
||||
mca_fs_lustre_file_get_size (ompio_file_t *fh,
|
||||
OMPI_MPI_OFFSET_TYPE *size)
|
||||
{
|
||||
*size = lseek(fh->fd, 0, SEEK_END);
|
||||
if (-1 == *size) {
|
||||
perror ("lseek");
|
||||
return OMPI_ERROR;
|
||||
}
|
||||
|
||||
if (-1 == (lseek(fh->fd, fh->f_offset, SEEK_SET))) {
|
||||
perror ("lseek");
|
||||
return OMPI_ERROR;
|
||||
}
|
||||
return OMPI_SUCCESS;
|
||||
}
|
||||
@ -1,55 +0,0 @@
|
||||
/*
|
||||
* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
|
||||
* University Research and Technology
|
||||
* Corporation. All rights reserved.
|
||||
* Copyright (c) 2004-2017 The University of Tennessee and The University
|
||||
* of Tennessee Research Foundation. All rights
|
||||
* reserved.
|
||||
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
|
||||
* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
* Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
||||
* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
|
||||
*
|
||||
* Additional copyrights may follow
|
||||
*
|
||||
* $HEADER$
|
||||
*/
|
||||
|
||||
|
||||
#include "ompi_config.h"
|
||||
#include "fs_lustre.h"
|
||||
|
||||
#include "mpi.h"
|
||||
#include "ompi/constants.h"
|
||||
#include "ompi/mca/fs/fs.h"
|
||||
|
||||
/*
|
||||
* file_set_size_lustre
|
||||
*
|
||||
* Function: - set_size of a file
|
||||
* Accepts: - same arguments as MPI_File_set_size()
|
||||
* Returns: - Success if size is set
|
||||
*/
|
||||
int
|
||||
mca_fs_lustre_file_set_size (ompio_file_t *fh,
|
||||
OMPI_MPI_OFFSET_TYPE size)
|
||||
{
|
||||
int err = 0;
|
||||
|
||||
err = ftruncate(fh->fd, size);
|
||||
|
||||
fh->f_comm->c_coll->coll_bcast (&err,
|
||||
1,
|
||||
MPI_INT,
|
||||
OMPIO_ROOT,
|
||||
fh->f_comm,
|
||||
fh->f_comm->c_coll->coll_bcast_module);
|
||||
if (-1 == err) {
|
||||
return OMPI_ERROR;
|
||||
}
|
||||
return OMPI_SUCCESS;
|
||||
}
|
||||
@ -1,49 +0,0 @@
|
||||
/*
|
||||
* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
|
||||
* University Research and Technology
|
||||
* Corporation. All rights reserved.
|
||||
* Copyright (c) 2004-2011 The University of Tennessee and The University
|
||||
* of Tennessee Research Foundation. All rights
|
||||
* reserved.
|
||||
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
|
||||
* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
* Copyright (c) 2008-2009 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
||||
* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
|
||||
*
|
||||
* Additional copyrights may follow
|
||||
*
|
||||
* $HEADER$
|
||||
*/
|
||||
|
||||
|
||||
#include "ompi_config.h"
|
||||
#include "fs_lustre.h"
|
||||
#include <unistd.h>
|
||||
|
||||
#include "mpi.h"
|
||||
#include "ompi/constants.h"
|
||||
#include "ompi/mca/fs/fs.h"
|
||||
|
||||
/*
|
||||
* file_sync_lustre
|
||||
*
|
||||
* Function: - closes a new file
|
||||
* Accepts: - file handle
|
||||
* Returns: - Success if file closed
|
||||
*/
|
||||
int
|
||||
mca_fs_lustre_file_sync (ompio_file_t *fh)
|
||||
{
|
||||
int err;
|
||||
|
||||
err = fsync(fh->fd);
|
||||
|
||||
if (-1 == err) {
|
||||
return OMPI_ERROR;
|
||||
}
|
||||
return OMPI_SUCCESS;
|
||||
}
|
||||
@ -9,7 +9,7 @@
|
||||
# University of Stuttgart. All rights reserved.
|
||||
# Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
# All rights reserved.
|
||||
# Copyright (c) 2008-2011 University of Houston. All rights reserved.
|
||||
# Copyright (c) 2008-2018 University of Houston. All rights reserved.
|
||||
# Copyright (c) 2017 IBM Corporation. All rights reserved.
|
||||
# $COPYRIGHT$
|
||||
#
|
||||
@ -46,9 +46,4 @@ sources = \
|
||||
fs_ufs.h \
|
||||
fs_ufs.c \
|
||||
fs_ufs_component.c \
|
||||
fs_ufs_file_open.c \
|
||||
fs_ufs_file_close.c \
|
||||
fs_ufs_file_delete.c \
|
||||
fs_ufs_file_sync.c \
|
||||
fs_ufs_file_set_size.c \
|
||||
fs_ufs_file_get_size.c
|
||||
fs_ufs_file_open.c
|
||||
|
||||
@ -9,7 +9,7 @@
|
||||
* University of Stuttgart. All rights reserved.
|
||||
* Copyright (c) 2004-2005 The Regents of the University of California.
|
||||
* All rights reserved.
|
||||
* Copyright (c) 2008-2014 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2008-2018 University of Houston. All rights reserved.
|
||||
* Copyright (c) 2018 Research Organization for Information Science
|
||||
* and Technology (RIST). All rights reserved.
|
||||
* $COPYRIGHT$
|
||||
@ -30,6 +30,7 @@
|
||||
#include "mpi.h"
|
||||
#include "ompi/mca/fs/fs.h"
|
||||
#include "ompi/mca/fs/ufs/fs_ufs.h"
|
||||
#include "ompi/mca/fs/base/base.h"
|
||||
|
||||
/*
|
||||
* *******************************************************************
|
||||
@ -40,11 +41,11 @@ static mca_fs_base_module_1_0_0_t ufs = {
|
||||
mca_fs_ufs_module_init, /* initalise after being selected */
|
||||
mca_fs_ufs_module_finalize, /* close a module on a communicator */
|
||||
mca_fs_ufs_file_open,
|
||||
mca_fs_ufs_file_close,
|
||||
mca_fs_ufs_file_delete,
|
||||
mca_fs_ufs_file_set_size,
|
||||
mca_fs_ufs_file_get_size,
|
||||
mca_fs_ufs_file_sync
|
||||
mca_fs_base_file_close,
|
||||
mca_fs_base_file_delete,
|
||||
mca_fs_base_file_set_size,
|
||||
mca_fs_base_file_get_size,
|
||||
mca_fs_base_file_sync
|
||||
};
|
||||
/*
|
||||
* *******************************************************************
|
||||
|
||||
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