diff --git a/Doxyfile b/Doxyfile
index 6726a551b0..75d0610652 100644
--- a/Doxyfile
+++ b/Doxyfile
@@ -108,7 +108,7 @@ FULL_PATH_NAMES        = YES
 # only done if one of the specified strings matches the left-hand part of 
 # the path. It is allowed to use relative paths in the argument list.
 
-STRIP_FROM_PATH        = include/ src/
+STRIP_FROM_PATH        = 
 
 # If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter 
 # (but less readable) file names. This can be useful is your file systems 
@@ -378,7 +378,7 @@ WARN_LOGFILE           =
 # directories like "/usr/src/myproject". Separate the files or directories 
 # with spaces.
 
-INPUT                  = include src
+INPUT                  = include opal orte ompi
 
 # If the value of the INPUT tag contains directories, you can use the 
 # FILE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp 
@@ -399,7 +399,7 @@ RECURSIVE              = YES
 # excluded from the INPUT source files. This way you can easily exclude a 
 # subdirectory from a directory tree whose root is specified with the INPUT tag.
 
-EXCLUDE                = src/event
+EXCLUDE                = opal/event
 
 # The EXCLUDE_SYMLINKS tag can be used select whether or not files or
 # directories that are symbolic links (a Unix filesystem feature) are