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README
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README
@ -12,8 +12,10 @@ Additional copyrights may follow
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$HEADER$
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$HEADER$
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===========================================================================
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This is a preliminary README file. It will be scrubbed formally
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This is a preliminary README file. It will be scrubbed formally
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before release.
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before release.
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===========================================================================
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The best way to report bugs, send comments, or ask questions is to
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The best way to report bugs, send comments, or ask questions is to
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sign up on the user's and/or developer's mailing list (for user-level
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sign up on the user's and/or developer's mailing list (for user-level
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@ -37,7 +39,21 @@ Thanks for your time.
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===========================================================================
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===========================================================================
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The following abbreviated list of release notes applies to this code
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The following abbreviated list of release notes applies to this code
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base as of this writing (8 Aug 2005):
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base as of this writing (26 Aug 2005):
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- Open MPI includes support for a wide variety of supplemental
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hardware and software package. When configuring Open MPI, you may
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need to supply additional flags to the "configure" script in order
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to tell Open MPI where the header files, libraries, and any other
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required files are located. As such, running "configure" by itself
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may include support for all the devices (etc.) that you expect,
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especially if their support headers / libraries are installed in
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non-standard locations. Network interconnects are an easy example
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to discuss -- Myrinet and Infiniband, for example, both have
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supplemental headers and libraries that must be found before Open
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MPI can build support for them. You must specify where these files
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are with the appropriate options to configure. See the listing of
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configure command-line switches, below, for more details.
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- The Open MPI installation must be in your PATH on all nodes (and
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- The Open MPI installation must be in your PATH on all nodes (and
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potentially LD_LIBRARY_PATH, if libmpi is a shared library).
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potentially LD_LIBRARY_PATH, if libmpi is a shared library).
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@ -55,31 +71,29 @@ base as of this writing (8 Aug 2005):
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happens automatically when multiple networks are available), but
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happens automatically when multiple networks are available), but
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needs performance tuning.
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needs performance tuning.
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- The only run-time systems currently supported are:
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- The run-time systems that are currently supported are:
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- rsh / ssh
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- rsh / ssh
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- Recent versions of BProc
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- Recent versions of BProc
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- PBS Pro, Open PBS, Torque (i.e., anything who supports the TM
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interface)
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- SLURM
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- Complete user and system administrator documentation is missing
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- Complete user and system administrator documentation is missing
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(this file comprises the majority of the current user
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(this file comprises the majority of the current user
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documentation).
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documentation).
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- The Fortran 90 MPI API is disabled by default (we have only be able
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- MPI-2 one-sided functionality will not be included in the first few
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to get it to work with gfortran). You can enable with with
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releases of Open MPI.
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configure options; see below.
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- Missing MPI functionality:
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- MPI-2 one-sided functionality will not be included in the first
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few releases of Open MPI.
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- Systems that have been tested are:
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- Systems that have been tested are:
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- Linux, 32 bit, with gcc
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- Linux, 32 bit, with gcc
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- Linux, 64 bit (x86), with gcc
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- OS X (10.3), 32 bit, with gcc
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- OS X (10.3), 32 bit, with gcc
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- OS X (10.4), 32 bit, with gcc
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- OS X (10.4), 32 bit, with gcc
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- Other systems have been lightly (but not fully tested):
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- Other systems have been lightly (but not fully tested):
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- Other compilers on Linux, 32 bit
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- Other compilers on Linux, 32 bit
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- 64 bit platforms (AMD, PPC64, Sparc); they "mostly work", but
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- Other 64 bit platforms (PPC64, Sparc)
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there are still some known issues
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- There are some cases where after running MPI applications, the
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- There are some cases where after running MPI applications, the
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directory /tmp/openmpi-sessions-<username>@<hostname>* will exist
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directory /tmp/openmpi-sessions-<username>@<hostname>* will exist
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@ -96,6 +110,11 @@ base as of this writing (8 Aug 2005):
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- Threading support (both asynchronous progress and
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- Threading support (both asynchronous progress and
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MPI_THREAD_MULTIPLE) is included, but is only lightly tested.
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MPI_THREAD_MULTIPLE) is included, but is only lightly tested.
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- Due to limitations in the Libtool 1.5 series, Fortran 90 MPI
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bindings support can only be built as a static library. It is
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expected that Libtool 2.0 will be able to support shared libraries
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for the Fortran 90 bindings.
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- On Linux, if either the malloc_hooks or malloc_interpose memory
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- On Linux, if either the malloc_hooks or malloc_interpose memory
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hooks are enabled, it will not be possible to link against a static
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hooks are enabled, it will not be possible to link against a static
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libc.a. libmpi can still be built statically - it is only the final
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libc.a. libmpi can still be built statically - it is only the final
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@ -167,10 +186,12 @@ for a full list); a summary of the more important ones follows:
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Allows asynchronous progress in some transports. See
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Allows asynchronous progress in some transports. See
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--with-threads; this is currently disabled by default.
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--with-threads; this is currently disabled by default.
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--enable-f90
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--disable-f77
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Enable building the Fortran 90 MPI bindings (disabled by default).
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Disable building the Fortran 77 MPI bindings.
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We have only been able to get these bindings to build with gfortran.
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Also related to the --with-f90-max-array-dim option.
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--disable-f90
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Disable building the Fortran 90 MPI bindings. Also related to the
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--with-f90-max-array-dim option.
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--with-f90-max-array-dim=<DIM>
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--with-f90-max-array-dim=<DIM>
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The F90 MPI bindings are stictly typed, even including the number of
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The F90 MPI bindings are stictly typed, even including the number of
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@ -188,14 +209,14 @@ for a full list); a summary of the more important ones follows:
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Build libmpi as a static library, and statically link in all
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Build libmpi as a static library, and statically link in all
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components.
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components.
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There are other options available -- see "./configure --help".
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There are several other options available -- see "./configure --help".
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Open MPI supports all the "make" targets that are provided by GNU
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Open MPI supports all the "make" targets that are provided by GNU
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Automake, such as:
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Automake, such as:
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all - build the entire package
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all - build the entire Open MPI package
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install - install the package
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install - install Open MPI
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uninstall - remove all traces of the package from the $prefix
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uninstall - remove all traces of Open MPI from the $prefix
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clean - clean out the build tree
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clean - clean out the build tree
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Once Open MPI has been built and installed, it is safe to run "make
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Once Open MPI has been built and installed, it is safe to run "make
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@ -325,37 +346,39 @@ component frameworks in Open MPI:
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MPI component frameworks:
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MPI component frameworks:
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-------------------------
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-------------------------
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coll - MPI collective algorithms
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allocator - Memory allocator
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io - MPI-2 I/O
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bml - BTL management layer
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pml - MPI point-to-point management layer
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btl - MPI point-to-point byte transfer layer
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bml - BTL management layer
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coll - MPI collective algorithms
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btl - MPI point-to-point byte transfer layer
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io - MPI-2 I/O
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topo - MPI topology routines
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mpool - Memory pooling
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pml - MPI point-to-point management layer
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topo - MPI topology routines
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Back-end run-time environment component frameworks:
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Back-end run-time environment component frameworks:
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---------------------------------------------------
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---------------------------------------------------
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errmgr - RTE error manager
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errmgr - RTE error manager
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gpr - General purpose registry
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gpr - General purpose registry
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iof - I/O forwarding
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iof - I/O forwarding
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ns - Name server
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ns - Name server
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oob - Out of band messaging
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oob - Out of band messaging
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pls - Process launch system
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pls - Process launch system
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ras - Resource allocation system
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ras - Resource allocation system
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rds - Resource discovery system
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rds - Resource discovery system
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rmaps - Resource mapping system
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rmaps - Resource mapping system
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rmgr - Resource manager
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rmgr - Resource manager
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rml - RTE message layer
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rml - RTE message layer
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soh - State of health monitor
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soh - State of health monitor
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Miscellaneous frameworks:
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Miscellaneous frameworks:
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-------------------------
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-------------------------
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allocator - Memory allocator
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maffinity - Memory affinity
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mpool - Memory pooling
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memory - Memory subsystem hooks
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paffinity - Processor affinity
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paffinity - Processor affinity
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timer - High-resolution timers
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timer - High-resolution timers
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memory - Memory subsystem hooks
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---------------------------------------------------------------------------
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---------------------------------------------------------------------------
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Each framework typically has one or more components that are used at
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Each framework typically has one or more components that are used at
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@ -416,31 +439,10 @@ defaults.
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Common Questions
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Common Questions
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----------------
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----------------
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1. How do I change the rsh/ssh launcher to use rsh?
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Many common questions about building and using Open MPI are answered
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on the FAQ:
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The default remote shell agent for the rsh/ssh launcher is ssh, but
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http://www.open-mpi.org/faq/
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you can set an MCA parameter to change it to rsh (or use a specific
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path for ssh, pass different parameters to rsh/ssh, etc.). The MCA
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parameter name is pls_rsh_agent. You can use any of the methods
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for setting MCA parameters described above; for example:
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shell$ mpirun --mca pls_rsh_agent rsh -np 4 a.out
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2. When I run "make", it looks very much like the build system is
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going into a loop, and I see messages similar to:
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Warning: File `Makefile.am' has modification time 3.6e+04 s in
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the future
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Open MPI uses an Automake-based build system, and is therefore
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highly dependent upon filesystem timestamps. If building on a
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networked file system, you *must* ensure that the time of the
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machine that you are building on is tightly synchronized with the
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time on your network fileserver (e.g., using ntp). If this is not
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possible, you will need to build Open MPI on a non-networked
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filesystem.
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...we'll add more questions here as they are asked by real users.
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===========================================================================
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===========================================================================
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