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openmpi/ompi/mca/coll/sm2/coll_sm2_bcast.c

235 строки
7.1 KiB
C
Исходник Обычный вид История

/*
* Copyright (c) 2007-2008 UT-Battelle, LLC
* $COPYRIGHT$
*
* Additional copyrights may follow
*
* $HEADER$
*/
/** @file */
#include "ompi_config.h"
#include "ompi/constants.h"
#include "coll_sm2.h"
- Split the datatype engine into two parts: an MPI specific part in OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
2009-07-13 08:56:31 +04:00
#include "ompi/datatype/ompi_datatype.h"
#include "ompi/communicator/communicator.h"
/* debug
#include "opal/sys/timer.h"
extern uint64_t timers[7];
end debug */
/**
* Shared memory blocking allreduce.
*/
static
int mca_coll_sm2_fanout(void *buf, int count,
struct ompi_datatype_t *dtype, int root,
struct ompi_communicator_t *comm,
mca_coll_base_module_t *module)
{
/* local variables */
int rc=OMPI_SUCCESS,n_dts_per_buffer,n_data_segments,stripe_number;
int comm_size,process_shift,my_node_index;
int my_rank;
int count_processed,count_this_stripe;
int my_fanout_parent;
size_t message_extent,dt_extent,ctl_size,len_data_buffer;
long long tag;
volatile char * my_data_pointer;
volatile char * parent_data_pointer;
mca_coll_sm2_nb_request_process_shared_mem_t *my_ctl_pointer;
volatile mca_coll_sm2_nb_request_process_shared_mem_t * parent_ctl_pointer;
mca_coll_sm2_module_t *sm_module;
tree_node_t *my_fanout_read_tree;
sm_work_buffer_t *sm_buffer_desc;
sm_module=(mca_coll_sm2_module_t *) module;
/* compute process shift */
my_rank=ompi_comm_rank(comm);
comm_size=ompi_comm_size(comm);
process_shift=root;
my_node_index=my_rank-root;
/* wrap around */
if(0 > my_node_index ) {
my_node_index+=comm_size;
}
/* get size of data needed - same layout as user data, so that
* we can apply the reudction routines directly on these buffers
*/
- Split the datatype engine into two parts: an MPI specific part in OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
2009-07-13 08:56:31 +04:00
rc=ompi_datatype_type_extent(dtype, &dt_extent);
if( OMPI_SUCCESS != rc ) {
goto Error;
}
message_extent=dt_extent*count;
/* lenght of control and data regions */
ctl_size=sm_module->ctl_memory_per_proc_per_segment;
len_data_buffer=sm_module->data_memory_per_proc_per_segment;
/* number of data types copies that the scratch buffer can hold */
n_dts_per_buffer=((int) len_data_buffer)/dt_extent;
if ( 0 == n_dts_per_buffer ) {
rc=OMPI_ERROR;
goto Error;
}
/* compute number of stripes needed to process this collective */
n_data_segments=(count+n_dts_per_buffer -1 ) / n_dts_per_buffer ;
/* get my node for the reduction tree */
my_fanout_read_tree=&(sm_module->fanout_read_tree[my_node_index]);
my_fanout_parent=my_fanout_read_tree->parent_rank+process_shift;
if( comm_size <= my_fanout_parent ){
my_fanout_parent-=comm_size;
}
count_processed=0;
/* get a pointer to the shared-memory working buffer */
/* NOTE: starting with a rather synchronous approach */
for( stripe_number=0 ; stripe_number < n_data_segments ; stripe_number++ ) {
/* get unique tag for this stripe - assume only one collective
* per communicator at a given time, so no locking needed
* for atomic update of the tag */
tag=sm_module->collective_tag;
sm_module->collective_tag++;
sm_buffer_desc=alloc_sm2_shared_buffer(sm_module);
/* get number of elements to process in this stripe */
count_this_stripe=n_dts_per_buffer;
if( count_processed + count_this_stripe > count )
count_this_stripe=count-count_processed;
/* offset to data segment */
my_ctl_pointer=sm_buffer_desc->proc_memory[my_rank].control_region;
my_data_pointer=sm_buffer_desc->proc_memory[my_rank].data_segment;
/*
* Fan out from root - let the memory copies at each
* stage help reduce memory contention.
*/
if( ROOT_NODE == my_fanout_read_tree->my_node_type ) {
/* copy data to user supplied buffer */
- Split the datatype engine into two parts: an MPI specific part in OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
2009-07-13 08:56:31 +04:00
rc=ompi_datatype_copy_content_same_ddt(dtype, count_this_stripe,
(char *)my_data_pointer,
(char *)((char *)buf+dt_extent*count_processed));
if( 0 != rc ) {
return OMPI_ERROR;
}
/* I am the root - so copy signal children, and then
* start reading
*/
MB();
my_ctl_pointer->flag=tag;
} else if( LEAF_NODE == my_fanout_read_tree->my_node_type ) {
parent_data_pointer=
sm_buffer_desc->proc_memory[my_fanout_parent].data_segment;
parent_ctl_pointer=
sm_buffer_desc->proc_memory[my_fanout_parent].control_region;
/*
* wait on Parent to signal that data is ready
*/
while( parent_ctl_pointer->flag != tag) {
opal_progress();
}
/* copy data to user supplied buffer */
- Split the datatype engine into two parts: an MPI specific part in OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
2009-07-13 08:56:31 +04:00
rc=ompi_datatype_copy_content_same_ddt(dtype, count_this_stripe,
(char *)buf+dt_extent*count_processed,
(char *)parent_data_pointer);
if( 0 != rc ) {
return OMPI_ERROR;
}
} else {
/* interior nodes */
parent_data_pointer=
sm_buffer_desc->proc_memory[my_fanout_parent].data_segment;
parent_ctl_pointer=
sm_buffer_desc->proc_memory[my_fanout_parent].control_region;
/*
* wait on Parent to signal that data is ready
*/
while( parent_ctl_pointer->flag != tag) {
opal_progress();
}
/* copy the data to my shared buffer, for access by children */
- Split the datatype engine into two parts: an MPI specific part in OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
2009-07-13 08:56:31 +04:00
rc=ompi_datatype_copy_content_same_ddt(dtype, count_this_stripe,
(char *)my_data_pointer,(char *)parent_data_pointer);
if( 0 != rc ) {
return OMPI_ERROR;
}
/* set memory barriet to make sure data is in main memory before
* the completion flgas are set.
*/
MB();
/* signal children that they may read the result data */
my_ctl_pointer->flag=tag;
/* copy data to user supplied buffer */
- Split the datatype engine into two parts: an MPI specific part in OMPI and a language agnostic part in OPAL. The convertor is completely moved into OPAL. This offers several benefits as described in RFC http://www.open-mpi.org/community/lists/devel/2009/07/6387.php namely: - Fewer basic types (int* and float* types, boolean and wchar - Fixing naming scheme to ompi-nomenclature. - Usability outside of the ompi-layer. - Due to the fixed nature of simple opal types, their information is completely known at compile time and therefore constified - With fewer datatypes (22), the actual sizes of bit-field types may be reduced from 64 to 32 bits, allowing reorganizing the opal_datatype structure, eliminating holes and keeping data required in convertor (upon send/recv) in one cacheline... This has implications to the convertor-datastructure and other parts of the code. - Several performance tests have been run, the netpipe latency does not change with this patch on Linux/x86-64 on the smoky cluster. - Extensive tests have been done to verify correctness (no new regressions) using: 1. mpi_test_suite on linux/x86-64 using clean ompi-trunk and ompi-ddt: a. running both trunk and ompi-ddt resulted in no differences (except for MPI_SHORT_INT and MPI_TYPE_MIX_LB_UB do now run correctly). b. with --enable-memchecker and running under valgrind (one buglet when run with static found in test-suite, commited) 2. ibm testsuite on linux/x86-64 using clean ompi-trunk and ompi-ddt: all passed (except for the dynamic/ tests failed!! as trunk/MTT) 3. compilation and usage of HDF5 tests on Jaguar using PGI and PathScale compilers. 4. compilation and usage on Scicortex. - Please note, that for the heterogeneous case, (-m32 compiled binaries/ompi), neither ompi-trunk, nor ompi-ddt branch would successfully launch. This commit was SVN r21641.
2009-07-13 08:56:31 +04:00
rc=ompi_datatype_copy_content_same_ddt(dtype, count_this_stripe,
(char *)buf+dt_extent*count_processed,
(char *)my_data_pointer);
if( 0 != rc ) {
return OMPI_ERROR;
}
}
/* "free" the shared-memory working buffer */
rc=free_sm2_shared_buffer(sm_module);
if( OMPI_SUCCESS != rc ) {
goto Error;
}
/* update the count of elements processed */
count_processed+=count_this_stripe;
}
/* return */
return rc;
Error:
return rc;
}
/**
* Shared memory blocking broadcast.
*/
int mca_coll_sm2_bcast_intra(void *buf, int count,
struct ompi_datatype_t *dtype, int root,
struct ompi_communicator_t *comm,
mca_coll_base_module_t *module)
{
/* local variables */
int rc;
rc= mca_coll_sm2_fanout(buf, count, dtype, root, comm, module);
if( OMPI_SUCCESS != rc ) {
goto Error;
}
return OMPI_SUCCESS;
Error:
return rc;
}