2012-06-26 02:38:06 +04:00
|
|
|
/*
|
2013-10-02 18:26:23 +04:00
|
|
|
* Copyright (c) 2006 The Trustees of Indiana University and Indiana
|
|
|
|
* University Research and Technology
|
|
|
|
* Corporation. All rights reserved.
|
|
|
|
* Copyright (c) 2006 The Technical University of Chemnitz. All
|
|
|
|
* rights reserved.
|
|
|
|
* Copyright (c) 2013 Los Alamos National Security, LLC. All rights
|
|
|
|
* reserved.
|
2015-01-09 07:44:01 +03:00
|
|
|
* Copyright (c) 2014-2015 Research Organization for Information Science
|
2014-10-10 10:19:37 +04:00
|
|
|
* and Technology (RIST). All rights reserved.
|
2015-01-09 07:44:01 +03:00
|
|
|
* Copyright (c) 2015 The University of Tennessee and The University
|
|
|
|
* of Tennessee Research Foundation. All rights
|
|
|
|
* reserved.
|
2012-06-26 02:38:06 +04:00
|
|
|
*
|
|
|
|
* Author(s): Torsten Hoefler <htor@cs.indiana.edu>
|
|
|
|
*
|
|
|
|
*/
|
|
|
|
#include "nbc_internal.h"
|
|
|
|
|
|
|
|
/* an reduce_csttare schedule can not be cached easily because the contents
|
|
|
|
* ot the recvcounts array may change, so a comparison of the address
|
|
|
|
* would not be sufficient ... we simply do not cache it */
|
|
|
|
|
|
|
|
/* binomial reduce to rank 0 followed by a linear scatter ...
|
|
|
|
*
|
|
|
|
* Algorithm:
|
|
|
|
* pairwise exchange
|
|
|
|
* round r:
|
|
|
|
* grp = rank % 2^r
|
|
|
|
* if grp == 0: receive from rank + 2^(r-1) if it exists and reduce value
|
|
|
|
* if grp == 1: send to rank - 2^(r-1) and exit function
|
|
|
|
*
|
|
|
|
* do this for R=log_2(p) rounds
|
|
|
|
*
|
|
|
|
*/
|
|
|
|
|
2014-10-10 10:19:37 +04:00
|
|
|
int ompi_coll_libnbc_ireduce_scatter(void* sendbuf, void* recvbuf, int *recvcounts, MPI_Datatype datatype,
|
2012-06-28 02:08:19 +04:00
|
|
|
MPI_Op op, struct ompi_communicator_t *comm, ompi_request_t ** request,
|
2014-10-10 10:19:37 +04:00
|
|
|
struct mca_coll_base_module_2_1_0_t *module) {
|
2012-06-26 02:38:06 +04:00
|
|
|
int peer, rank, maxr, p, r, res, count, offset, firstred;
|
|
|
|
MPI_Aint ext;
|
|
|
|
char *redbuf, *sbuf, inplace;
|
|
|
|
NBC_Schedule *schedule;
|
2012-06-28 02:08:19 +04:00
|
|
|
NBC_Handle *handle;
|
|
|
|
ompi_coll_libnbc_request_t **coll_req = (ompi_coll_libnbc_request_t**) request;
|
|
|
|
ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module;
|
2012-06-26 02:38:06 +04:00
|
|
|
|
|
|
|
NBC_IN_PLACE(sendbuf, recvbuf, inplace);
|
|
|
|
|
2012-06-28 02:08:19 +04:00
|
|
|
res = NBC_Init_handle(comm, coll_req, libnbc_module);
|
2012-06-26 02:38:06 +04:00
|
|
|
if(res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; }
|
2015-01-09 07:44:01 +03:00
|
|
|
res = MPI_Comm_size(comm, &p);
|
|
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_size() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
if(p==1) {
|
|
|
|
if(!inplace) {
|
|
|
|
/* single node not in_place: copy data to recvbuf */
|
|
|
|
res = NBC_Copy(sendbuf, recvcounts[0], datatype, recvbuf, recvcounts[0], datatype, comm);
|
|
|
|
if (NBC_OK != res) { printf("Error in NBC_Copy() (%i)\n", res); return res; }
|
|
|
|
}
|
|
|
|
/* manually complete the request */
|
|
|
|
(*request)->req_status.MPI_ERROR = OMPI_SUCCESS;
|
|
|
|
OPAL_THREAD_LOCK(&ompi_request_lock);
|
|
|
|
ompi_request_complete(*request, true);
|
|
|
|
OPAL_THREAD_UNLOCK(&ompi_request_lock);
|
|
|
|
return NBC_OK;
|
|
|
|
}
|
|
|
|
|
2012-07-02 20:39:42 +04:00
|
|
|
handle = (*coll_req);
|
2015-01-09 07:44:01 +03:00
|
|
|
|
2012-06-26 02:38:06 +04:00
|
|
|
res = MPI_Comm_rank(comm, &rank);
|
|
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; }
|
|
|
|
MPI_Type_extent(datatype, &ext);
|
|
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
schedule = (NBC_Schedule*)malloc(sizeof(NBC_Schedule));
|
|
|
|
if (NULL == schedule) { printf("Error in malloc()\n"); return NBC_OOR; }
|
|
|
|
|
|
|
|
res = NBC_Sched_create(schedule);
|
|
|
|
if(res != NBC_OK) { printf("Error in NBC_Sched_create (%i)\n", res); return res; }
|
|
|
|
|
2012-08-07 14:41:53 +04:00
|
|
|
maxr = (int)ceil((log((double)p)/LOG2));
|
2012-06-26 02:38:06 +04:00
|
|
|
|
|
|
|
count = 0;
|
|
|
|
for(r=0;r<p;r++) count += recvcounts[r];
|
|
|
|
|
|
|
|
handle->tmpbuf = malloc(ext*count*2);
|
|
|
|
if(handle->tmpbuf == NULL) { printf("Error in malloc()\n"); return NBC_OOR; }
|
|
|
|
|
|
|
|
redbuf = ((char*)handle->tmpbuf)+(ext*count);
|
|
|
|
|
|
|
|
firstred = 1;
|
|
|
|
for(r=1; r<=maxr; r++) {
|
|
|
|
if((rank % (1<<r)) == 0) {
|
|
|
|
/* we have to receive this round */
|
|
|
|
peer = rank + (1<<(r-1));
|
|
|
|
if(peer<p) {
|
|
|
|
res = NBC_Sched_recv(0, true, count, datatype, peer, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
|
|
|
|
/* we have to wait until we have the data */
|
|
|
|
res = NBC_Sched_barrier(schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
if(firstred) {
|
|
|
|
/* take reduce data from the sendbuf in the first round -> save copy */
|
|
|
|
res = NBC_Sched_op(redbuf-(unsigned long)handle->tmpbuf, true, sendbuf, false, 0, true, count, datatype, op, schedule);
|
|
|
|
firstred = 0;
|
|
|
|
} else {
|
|
|
|
/* perform the reduce in my local buffer */
|
|
|
|
res = NBC_Sched_op(redbuf-(unsigned long)handle->tmpbuf, true, redbuf-(unsigned long)handle->tmpbuf, true, 0, true, count, datatype, op, schedule);
|
|
|
|
}
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_op() (%i)\n", res); return res; }
|
|
|
|
/* this cannot be done until handle->tmpbuf is unused :-( */
|
|
|
|
res = NBC_Sched_barrier(schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
}
|
|
|
|
} else {
|
|
|
|
/* we have to send this round */
|
|
|
|
peer = rank - (1<<(r-1));
|
|
|
|
if(firstred) {
|
|
|
|
/* we have to send the senbuf */
|
|
|
|
res = NBC_Sched_send(sendbuf, false, count, datatype, peer, schedule);
|
|
|
|
} else {
|
|
|
|
/* we send an already reduced value from redbuf */
|
|
|
|
res = NBC_Sched_send(redbuf-(unsigned long)handle->tmpbuf, true, count, datatype, peer, schedule);
|
|
|
|
}
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
|
|
|
|
/* leave the game */
|
|
|
|
break;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
res = NBC_Sched_barrier(schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
/* rank 0 is root and sends - all others receive */
|
|
|
|
if(rank != 0) {
|
|
|
|
res = NBC_Sched_recv(recvbuf, false, recvcounts[rank], datatype, 0, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
|
|
|
|
}
|
|
|
|
|
|
|
|
if(rank == 0) {
|
|
|
|
offset = 0;
|
|
|
|
for(r=1;r<p;r++) {
|
|
|
|
offset += recvcounts[r-1];
|
|
|
|
sbuf = ((char *)redbuf) + (offset*ext);
|
|
|
|
/* root sends the right buffer to the right receiver */
|
|
|
|
res = NBC_Sched_send(sbuf-(unsigned long)handle->tmpbuf, true, recvcounts[r], datatype, r, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
|
|
|
|
}
|
|
|
|
res = NBC_Sched_copy(redbuf-(unsigned long)handle->tmpbuf, true, recvcounts[0], datatype, recvbuf, false, recvcounts[0], datatype, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_copy() (%i)\n", res); return res; }
|
|
|
|
}
|
|
|
|
|
|
|
|
/*NBC_PRINT_SCHED(*schedule);*/
|
|
|
|
|
|
|
|
res = NBC_Sched_commit(schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_commit() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Start(handle, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Start() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
/* tmpbuf is freed with the handle */
|
|
|
|
return NBC_OK;
|
|
|
|
}
|
2013-10-02 18:26:23 +04:00
|
|
|
|
|
|
|
int ompi_coll_libnbc_ireduce_scatter_inter(void* sendbuf, void* recvbuf, int *recvcounts, MPI_Datatype datatype,
|
|
|
|
MPI_Op op, struct ompi_communicator_t *comm, ompi_request_t ** request,
|
2014-10-10 10:19:37 +04:00
|
|
|
struct mca_coll_base_module_2_1_0_t *module) {
|
2013-10-02 18:26:23 +04:00
|
|
|
int peer, rank, r, res, count, rsize, offset;
|
|
|
|
MPI_Aint ext;
|
|
|
|
NBC_Schedule *schedule;
|
|
|
|
NBC_Handle *handle;
|
|
|
|
ompi_coll_libnbc_request_t **coll_req = (ompi_coll_libnbc_request_t**) request;
|
|
|
|
ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module;
|
|
|
|
|
|
|
|
res = NBC_Init_handle(comm, coll_req, libnbc_module);
|
|
|
|
if(res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; }
|
|
|
|
handle = (*coll_req);
|
|
|
|
res = MPI_Comm_rank(comm, &rank);
|
|
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; }
|
|
|
|
res = MPI_Comm_remote_size(comm, &rsize);
|
|
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_remote_size() (%i)\n", res); return res; }
|
|
|
|
MPI_Type_extent(datatype, &ext);
|
|
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
schedule = (NBC_Schedule*)malloc(sizeof(NBC_Schedule));
|
|
|
|
if (NULL == schedule) { printf("Error in malloc()\n"); return NBC_OOR; }
|
|
|
|
|
|
|
|
res = NBC_Sched_create(schedule);
|
|
|
|
if(res != NBC_OK) { printf("Error in NBC_Sched_create (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
count = 0;
|
|
|
|
for (r = 0 ; r < rsize ; ++r) count += recvcounts[r];
|
|
|
|
|
|
|
|
handle->tmpbuf = malloc(2 * ext * count);
|
|
|
|
if(handle->tmpbuf == NULL) { printf("Error in malloc()\n"); return NBC_OOR; }
|
|
|
|
|
|
|
|
/* send my data to the remote root */
|
|
|
|
res = NBC_Sched_send(sendbuf, false, count, datatype, 0, schedule);
|
|
|
|
if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
if (0 == rank) {
|
|
|
|
res = NBC_Sched_recv((void *) 0, true, count, datatype, 0, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Sched_barrier(schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
for (peer = 1 ; peer < rsize ; ++peer) {
|
|
|
|
res = NBC_Sched_recv((void *)(ext * count), true, count, datatype, peer, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Sched_barrier(schedule);
|
|
|
|
if (NBC_OK != res) { printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Sched_op((void *) 0, true, (void *)(ext * count), true, (void *) 0, true, count, datatype, op, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_op() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Sched_barrier(schedule);
|
|
|
|
if (NBC_OK != res) { printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
/* exchange data with remote root for scatter phase (we *could* use the local communicator to do the scatter) */
|
|
|
|
res = NBC_Sched_recv((void *)(ext * count), true, count, datatype, 0, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Sched_send((void *) 0, true, count, datatype, 0, schedule);
|
|
|
|
if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Sched_barrier(schedule);
|
|
|
|
if (NBC_OK != res) { printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
/* scatter */
|
|
|
|
for (peer = 0, offset = ext * count ; peer < rsize ; ++peer) {
|
|
|
|
res = NBC_Sched_send((void *)(uintptr_t) offset, true, recvcounts[peer], datatype, peer, schedule);
|
|
|
|
if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
|
|
|
|
offset += recvcounts[peer] * ext;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
/* receive my block */
|
|
|
|
res = NBC_Sched_recv(recvbuf, false, recvcounts[rank], datatype, 0, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
/*NBC_PRINT_SCHED(*schedule);*/
|
|
|
|
|
|
|
|
res = NBC_Sched_commit(schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Sched_commit() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
res = NBC_Start(handle, schedule);
|
|
|
|
if (NBC_OK != res) { free(handle->tmpbuf); printf("Error in NBC_Start() (%i)\n", res); return res; }
|
|
|
|
|
|
|
|
/* tmpbuf is freed with the handle */
|
|
|
|
return NBC_OK;
|
|
|
|
}
|