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openmpi/ompi/mca/coll/tuned/coll_tuned_reduce.c

540 строки
22 KiB
C
Исходник Обычный вид История

/*
* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
* University Research and Technology
* Corporation. All rights reserved.
* Copyright (c) 2004-2005 The University of Tennessee and The University
* of Tennessee Research Foundation. All rights
* reserved.
* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
* University of Stuttgart. All rights reserved.
* Copyright (c) 2004-2005 The Regents of the University of California.
* All rights reserved.
* $COPYRIGHT$
*
* Additional copyrights may follow
*
* $HEADER$
*/
#include "ompi_config.h"
#include "mpi.h"
#include "ompi/include/constants.h"
#include "datatype/datatype.h"
#include "communicator/communicator.h"
#include "mca/coll/coll.h"
#include "mca/coll/base/coll_tags.h"
#include "mca/pml/pml.h"
#include "op/op.h"
#include "coll_tuned.h"
#include "coll_tuned_topo.h"
#include <sys/types.h>
#include <unistd.h>
/* temp debug routines */
static int dump_buf_int (char* ptr, int count, char *comment, int rank);
static int dump_buf_int (char* ptr, int count, char *comment, int rank) {
int i=0;
int *tptr;
int c=0;
tptr=(int*)ptr;
printf("%1d ", rank);
if (comment) printf("%s ", comment);
if (count <0) {
printf("cnt %d?\n", count);
return (0);
}
if (count>5) c = 5;
else c = count;
printf("Cnt %1d ", count);
for(i=0;i<c;i++) {
printf("%1d [%1d] ", i, *tptr++);
}
if (c!=count) {
tptr=(int*)ptr;
printf(" ... %1d [%1d]", count-1, tptr[count-1]);
}
printf("\n");
return (0);
}
/* Attention: this version of the reduce operations does not
work for:
- non-commutative operations
- segment sizes which are not multiplies of the extent of the datatype
meaning that at least one datatype must fit in the segment !
*/
int mca_coll_tuned_reduce_intra_chain( void *sendbuf, void *recvbuf, int count,
ompi_datatype_t* datatype, ompi_op_t* op,
int root, ompi_communicator_t* comm, uint32_t segsize,
int fanout)
{
int ret, line, rank, size, i = 0;
int recvcount, sendcount, prevcount, inbi, previnbi;
int segcount, segindex, num_segments, realsegsize;
char *inbuf[2] = {NULL, NULL};
char *accumbuf = NULL;
char *sendtmpbuf = NULL;
long ext, lb;
int typelng;
int allocedaccumbuf;
ompi_request_t* reqs[2];
ompi_coll_chain_t* chain;
size = ompi_comm_size(comm);
rank = ompi_comm_rank(comm);
OPAL_OUTPUT((mca_coll_tuned_stream,"coll:tuned:reduce_intra_chain rank %d", rank));
/* ----------------------------------------------------------------- */
/* setup the chain topology.
* if the previous chain topology is the same, then use this cached copy
* other wise recreate it.
*/
if ((comm->c_coll_selected_data->cached_chain) && (comm->c_coll_selected_data->cached_chain_root == root)
&& (comm->c_coll_selected_data->cached_chain_fanout == fanout)) {
chain = comm->c_coll_selected_data->cached_chain;
}
else {
if (comm->c_coll_selected_data->cached_chain) { /* destroy previous chain if defined */
ompi_coll_tuned_topo_destroy_chain (&comm->c_coll_selected_data->cached_chain);
}
comm->c_coll_selected_data->cached_chain = chain = ompi_coll_tuned_topo_build_chain(fanout,comm,root);
comm->c_coll_selected_data->cached_chain_root = root;
comm->c_coll_selected_data->cached_chain_fanout = fanout;
}
/* ----------------------------------------------------------------- */
/* Determine number of segments and number of elements
sent per operation */
ompi_ddt_get_extent( datatype, &lb, &ext );
ompi_ddt_type_size( datatype, &typelng );
if( segsize > 0 ) {
segcount = segsize/typelng;
num_segments = count/segcount;
if( (count % segcount) != 0 ) num_segments++;
} else {
segcount = count;
num_segments = 1;
}
realsegsize = segcount * ext;
/* printf("rank %d root %d count %d \t\t segsize %d typesize %d typeext %d realsegsize %d segcount %d num_segments %d\n", */
/* rank, root, count, segsize, typelng, ext, realsegsize, segcount, num_segments); */
/* ompi_coll_tuned_topo_dump_chain (chain, rank); */
if (sendbuf != MPI_IN_PLACE) {
sendtmpbuf = (char*) sendbuf;
}
else {
sendtmpbuf = (char *) recvbuf;
}
/* handle special case when size == 1 */
if (1 == size ) {
if (sendbuf != MPI_IN_PLACE) {
ompi_ddt_copy_content_same_ddt( datatype, count, recvbuf, sendbuf );
}
return MPI_SUCCESS;
}
/* handle non existant recv buffer (i.e. its NULL.. like basic allreduce uses!) */
if (recvbuf) {
accumbuf = (char *) recvbuf;
allocedaccumbuf = 0;
}
else {
accumbuf = (char*) malloc(realsegsize);
if (accumbuf == NULL) { line = __LINE__; ret = -1; goto error_hndl; }
allocedaccumbuf = 1;
}
/* ----------------------------------------------------------------- */
/* non-leaf nodes -
wait for children to send me data & forward up (if needed) */
if( chain->chain_nextsize > 0 ) {
/* Allocate two buffers for incoming segments */
inbuf[0] = (char*) malloc(realsegsize);
if (inbuf[0] == NULL) { line = __LINE__; ret = -1; goto error_hndl; }
/* if there is chance to overlap communication -
allocate second buffer */
if (num_segments > 1 || chain->chain_nextsize > 1) {
inbuf[1] = (char*) malloc(realsegsize);
if (inbuf[1] == NULL) { line = __LINE__; ret = -1; goto error_hndl;}
} else {
inbuf[1] = NULL;
}
/* reset input buffer index and receive count */
inbi = 0; recvcount = 0;
/* for each segment */
for (segindex = 0; segindex <= num_segments; segindex++) {
prevcount = recvcount;
/* recvcount - number of elements in current segment */
if (segindex < num_segments-1) { recvcount = segcount; }
else { recvcount = count - segcount*segindex; }
/* for each child */
for (i = 0; i < chain->chain_nextsize; i++) {
/*
We try to overlap communication:
either with next segment or with the next child
*/
/* post irecv for current segindex on current child */
if (segindex < num_segments) {
if (0==i) { /* for the first step (1st child per segment) */
/* we might be able to irecv directly into the accumulate buffer so that we */
/* can reduce(op) this with our sendbuf in one step */
/* as ompi_op_reduce only has two buffer pointers, this avoids */
/* an extra memory copy GEF */
/* BUT if we are root and are USING MPI_IN_PLACE this is wrong ek! */
/* check for root might not be needed as it should be checked higher up */
if ((MPI_IN_PLACE==sendbuf)&&(rank==root)) {
ret = MCA_PML_CALL(irecv(inbuf[inbi],
recvcount,datatype,
chain->chain_next[i],
MCA_COLL_BASE_TAG_REDUCE,
comm, &reqs[inbi]));
if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
} else {
ret = MCA_PML_CALL(irecv(accumbuf+segindex*realsegsize,
recvcount,datatype,
chain->chain_next[i],
MCA_COLL_BASE_TAG_REDUCE,
comm, &reqs[inbi]));
if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
}
} /* if first segment */
else { /* perform a irecv into the standard inbuf */
ret = MCA_PML_CALL(irecv(inbuf[inbi],recvcount,datatype,
chain->chain_next[i],
MCA_COLL_BASE_TAG_REDUCE,
comm, &reqs[inbi]));
if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
}
}
/* wait for previous req to complete, if any */
previnbi = (inbi+1)%2;
if (i > 0) {
/* wait on data from previous child for current segment */
ret = ompi_request_wait_all( 1, &reqs[previnbi], MPI_STATUSES_IGNORE );
if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
/* apply operation */
if (1==i) {
/* our first operation is to combine our own [sendbuf] data with the data we recvd from down stream */
/* (but only if we are not root and not using MPI_IN_PLACE) */
if ((MPI_IN_PLACE==sendbuf)&&(rank==root)) {
ompi_op_reduce(op, inbuf[previnbi], accumbuf+segindex*realsegsize, recvcount, datatype );
}
else {
ompi_op_reduce(op, sendtmpbuf+segindex*realsegsize, accumbuf+segindex*realsegsize, recvcount, datatype );
}
}
else { /* not the first child, we can accumulate straight into accumbuf normally from the inbuf buffers */
ompi_op_reduce(op, inbuf[previnbi], accumbuf+segindex*realsegsize, recvcount, datatype );
} /* if i>0 (if not first step) */
} else if (i == 0 && segindex > 0) {
/* wait on data from last child for previous segment */
ret = ompi_request_wait_all( 1, &reqs[previnbi], MPI_STATUSES_IGNORE );
if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
if (chain->chain_nextsize>1) { /* if I have more than one child */
/* I reduce the data in the the inbuf and the accumbuf */
/* as the accumbuf already contains some accumulated results */
ompi_op_reduce(op, inbuf[previnbi], accumbuf+(segindex-1)*realsegsize, prevcount, datatype );
}
else { /* I have only one child, so I must combine my data (sendbuf) with the accumulated data in accumbuf */
/* (but only if we are not root and not using MPI_IN_PLACE) */
if ((MPI_IN_PLACE==sendbuf)&&(rank==root)) {
ompi_op_reduce(op, inbuf[previnbi], accumbuf+(segindex-1)*realsegsize, prevcount, datatype );
}
else {
ompi_op_reduce(op, sendtmpbuf+(segindex-1)*realsegsize, accumbuf+(segindex-1)*realsegsize, prevcount, datatype );
}
}
/* all reduced on available data this step (i) complete, pass to the next process unless your the root */
if (rank != root) {
/* send combined/accumulated data to parent */
ret = MCA_PML_CALL( send(accumbuf+(segindex-1)*realsegsize,
prevcount,datatype, chain->chain_prev,
MCA_COLL_BASE_TAG_REDUCE, MCA_PML_BASE_SEND_STANDARD, comm) );
if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
}
/* we stop when segindex = number of segments (i.e. we do num_segment+1 steps to allow for pipelining */
if (segindex == num_segments) break;
}
/* update input buffer index */
inbi = previnbi;
} /* end of for each child */
} /* end of for each segment */
/* clean up */
if (inbuf!=NULL) {
if (inbuf[0] != NULL) free(inbuf[0]);
if (inbuf[1] != NULL) free(inbuf[1]);
if (allocedaccumbuf) free(accumbuf);
}
}
/* leaf nodes */
else {
/* Send segmented data to parents */
for (segindex = 0; segindex < num_segments; segindex++) {
if (segindex < num_segments-1) sendcount = segcount;
else sendcount = count - segindex*segcount;
ret = MCA_PML_CALL( send((char*)sendbuf+segindex*realsegsize, sendcount,
datatype, chain->chain_prev,
MCA_COLL_BASE_TAG_REDUCE, MCA_PML_BASE_SEND_STANDARD, comm) );
if (ret != MPI_SUCCESS) { line = __LINE__; goto error_hndl; }
}
}
return MPI_SUCCESS;
/* error handler */
error_hndl:
OPAL_OUTPUT (( mca_coll_tuned_stream, "ERROR_HNDL: node %d file %s line %d error %d\n", rank, __FILE__, line, ret ));
if( inbuf != NULL ) {
if( inbuf[0] != NULL ) free(inbuf[0]);
if( inbuf[1] != NULL ) free(inbuf[1]);
if (allocedaccumbuf) free(accumbuf);
}
return ret;
}
int mca_coll_tuned_reduce_intra_pipeline( void *sendbuf, void *recvbuf,
int count, ompi_datatype_t* datatype,
ompi_op_t* op, int root,
ompi_communicator_t* comm, uint32_t segsize )
{
int rank;
rank = ompi_comm_rank(comm);
OPAL_OUTPUT((mca_coll_tuned_stream,"coll:tuned:reduce_intra_pipeline rank %d", rank));
return mca_coll_tuned_reduce_intra_chain( sendbuf,recvbuf, count,
datatype, op, root, comm,
segsize, 1 );
}
/*
* Linear functions are copied from the BASIC coll module
* they do not segment the message and are simple implementations
* but for some small number of nodes and/or small data sizes they
* are just as fast as tuned/tree based segmenting operations
* and as such may be selected by the decision functions
* These are copied into this module due to the way we select modules
* in V1. i.e. in V2 we will handle this differently and so will not
* have to duplicate code.
* GEF Oct05 after asking Jeff.
*/
/* copied function (with appropriate renaming) starts here */
/*
* reduce_lin_intra
*
* Function: - reduction using O(N) algorithm
* Accepts: - same as MPI_Reduce()
* Returns: - MPI_SUCCESS or error code
*/
int
mca_coll_tuned_reduce_intra_basic_linear(void *sbuf, void *rbuf, int count,
struct ompi_datatype_t *dtype,
struct ompi_op_t *op,
int root, struct ompi_communicator_t *comm)
{
int i;
int rank;
int err;
int size;
long true_lb, true_extent, lb, extent;
char *free_buffer = NULL;
char *pml_buffer = NULL;
char *inplace_temp = NULL;
char *inbuf;
/* Initialize */
rank = ompi_comm_rank(comm);
size = ompi_comm_size(comm);
OPAL_OUTPUT((mca_coll_tuned_stream,"coll:tuned:reduce_intra_basic_linear rank %d", rank));
/* If not root, send data to the root. */
if (rank != root) {
err = MCA_PML_CALL(send(sbuf, count, dtype, root,
MCA_COLL_BASE_TAG_REDUCE,
MCA_PML_BASE_SEND_STANDARD, comm));
return err;
}
/* see discussion in mca_coll_basic_reduce_lin_intra about extent and true extend */
/* for reducing buffer allocation lengths.... */
ompi_ddt_get_extent(dtype, &lb, &extent);
ompi_ddt_get_true_extent(dtype, &true_lb, &true_extent);
if (MPI_IN_PLACE == sbuf) {
sbuf = rbuf;
inplace_temp = malloc(true_extent + (count - 1) * extent);
if (NULL == inplace_temp) {
return OMPI_ERR_OUT_OF_RESOURCE;
}
rbuf = inplace_temp - lb;
}
if (size > 1) {
free_buffer = malloc(true_extent + (count - 1) * extent);
if (NULL == free_buffer) {
return OMPI_ERR_OUT_OF_RESOURCE;
}
pml_buffer = free_buffer - lb;
}
/* Initialize the receive buffer. */
if (rank == (size - 1)) {
err = ompi_ddt_copy_content_same_ddt(dtype, count, rbuf, sbuf);
} else {
err = MCA_PML_CALL(recv(rbuf, count, dtype, size - 1,
MCA_COLL_BASE_TAG_REDUCE, comm,
MPI_STATUS_IGNORE));
}
if (MPI_SUCCESS != err) {
if (NULL != free_buffer) {
free(free_buffer);
}
return err;
}
/* Loop receiving and calling reduction function (C or Fortran). */
for (i = size - 2; i >= 0; --i) {
if (rank == i) {
inbuf = sbuf;
} else {
err = MCA_PML_CALL(recv(pml_buffer, count, dtype, i,
MCA_COLL_BASE_TAG_REDUCE, comm,
MPI_STATUS_IGNORE));
if (MPI_SUCCESS != err) {
if (NULL != free_buffer) {
free(free_buffer);
}
return err;
}
inbuf = pml_buffer;
}
/* Perform the reduction */
ompi_op_reduce(op, inbuf, rbuf, count, dtype);
}
if (NULL != inplace_temp) {
err = ompi_ddt_copy_content_same_ddt(dtype, count, sbuf, inplace_temp);
free(inplace_temp);
}
if (NULL != free_buffer) {
free(free_buffer);
}
/* All done */
return MPI_SUCCESS;
}
/* copied function (with appropriate renaming) ends here */
/* The following are used by dynamic and forced rules */
/* publish details of each algorithm and if its forced/fixed/locked in */
/* as you add methods/algorithms you must update this and the query/map routines */
int mca_coll_tuned_reduce_intra_check_forced ( )
{
mca_base_param_reg_int(&mca_coll_tuned_component.collm_version,
"reduce_algorithm",
"Which reduce algorithm is used. Can be locked down to choice of: 0 ignore, 1 linear, 2 chain, 3 pipeline",
false, false, mca_coll_tuned_reduce_forced_choice,
&mca_coll_tuned_reduce_forced_choice);
mca_base_param_reg_int(&mca_coll_tuned_component.collm_version,
"reduce_algorithm_segmentsize",
"Segment size in bytes used by default for reduce algorithms. Only has meaning if algorithm is forced and supports segmenting. 0 bytes means no segmentation.",
false, false, mca_coll_tuned_reduce_forced_segsize,
&mca_coll_tuned_reduce_forced_segsize);
mca_base_param_reg_int(&mca_coll_tuned_component.collm_version,
"reduce_algorithm_tree_fanout",
"Fanout for n-tree used for reduce algorithms. Only has meaning if algorithm is forced and supports n-tree topo based operation.",
false, false,
mca_coll_tuned_init_tree_fanout, /* get system wide default */
&mca_coll_tuned_reduce_forced_tree_fanout);
mca_base_param_reg_int(&mca_coll_tuned_component.collm_version,
"reduce_algorithm_chain_fanout",
"Fanout for chains used for reduce algorithms. Only has meaning if algorithm is forced and supports chain topo based operation.",
false, false,
mca_coll_tuned_init_chain_fanout, /* get system wide default */
&mca_coll_tuned_reduce_forced_chain_fanout);
return (MPI_SUCCESS);
}
int mca_coll_tuned_reduce_intra_query ( )
{
return (3); /* 3 algorithms available */
}
int mca_coll_tuned_reduce_intra_do_forced(void *sbuf, void* rbuf, int count,
struct ompi_datatype_t *dtype,
struct ompi_op_t *op, int root,
struct ompi_communicator_t *comm)
{
OPAL_OUTPUT((mca_coll_tuned_stream,"coll:tuned:reduce_intra_do_forced selected algorithm %d", mca_coll_tuned_reduce_forced_choice));
switch (mca_coll_tuned_reduce_forced_choice) {
case (0): return mca_coll_tuned_reduce_intra_dec_fixed (sbuf, rbuf, count, dtype, op, root, comm);
case (1): return mca_coll_tuned_reduce_intra_basic_linear (sbuf, rbuf, count, dtype, op, root, comm);
case (2): return mca_coll_tuned_reduce_intra_chain (sbuf, rbuf, count, dtype, op, root, comm,
mca_coll_tuned_reduce_forced_segsize, mca_coll_tuned_reduce_forced_chain_fanout);
case (3): return mca_coll_tuned_reduce_intra_pipeline (sbuf, rbuf, count, dtype, op, root, comm,
mca_coll_tuned_reduce_forced_segsize);
default:
OPAL_OUTPUT((mca_coll_tuned_stream,"coll:tuned:reduce_intra_do_forced attempt to select algorithm %d when only 0-%d is valid?",
mca_coll_tuned_reduce_forced_choice, mca_coll_tuned_reduce_intra_query()));
return (MPI_ERR_ARG);
} /* switch */
}