2011-08-26 00:08:17 +04:00
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/*
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2015-09-03 04:33:45 +03:00
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2004-2005 The University of Tennessee and The University
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* of Tennessee Research Foundation. All rights
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* reserved.
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* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2008-2015 University of Houston. All rights reserved.
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* Copyright (c) 2015 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
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* $COPYRIGHT$
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2015-06-24 06:59:57 +03:00
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*
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2015-09-03 04:33:45 +03:00
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* Additional copyrights may follow
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2015-06-24 06:59:57 +03:00
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*
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2015-09-03 04:33:45 +03:00
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* $HEADER$
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2011-08-26 00:08:17 +04:00
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*/
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#include "ompi_config.h"
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#include "ompi/communicator/communicator.h"
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#include "ompi/info/info.h"
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#include "ompi/file/file.h"
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#include "ompi/mca/fs/fs.h"
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#include "ompi/mca/fs/base/base.h"
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#include "ompi/mca/fcoll/fcoll.h"
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#include "ompi/mca/fcoll/base/base.h"
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#include "ompi/mca/fbtl/fbtl.h"
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#include "ompi/mca/fbtl/base/base.h"
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2013-07-18 01:30:50 +04:00
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#include "ompi/mca/sharedfp/sharedfp.h"
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#include "ompi/mca/sharedfp/base/base.h"
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2011-08-26 00:08:17 +04:00
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#include "io_ompio.h"
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2014-08-22 05:34:19 +04:00
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#include "io_ompio_request.h"
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2011-08-26 00:08:17 +04:00
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#include "math.h"
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#include <unistd.h>
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2015-06-24 06:59:57 +03:00
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/* Read and write routines are split into two interfaces.
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** The
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** mca_io_ompio_file_read/write[_at]
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**
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2014-08-15 00:17:58 +04:00
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** routines are the ones registered with the ompio modules.
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** The
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2015-06-24 06:59:57 +03:00
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**
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2014-08-15 00:17:58 +04:00
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** ompio_io_ompio_file_read/write[_at]
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**
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** routesin are used e.g. from the shared file pointer modules.
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** The main difference is, that the first one takes an ompi_file_t
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** as a file pointer argument, while the second uses the ompio internal
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** mca_io_ompio_file_t structure.
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*/
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int mca_io_ompio_file_write (ompi_file_t *fp,
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2015-09-03 04:33:45 +03:00
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const void *buf,
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2014-08-15 00:17:58 +04:00
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int count,
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struct ompi_datatype_t *datatype,
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ompi_status_public_t *status)
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2011-08-26 00:08:17 +04:00
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{
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int ret = OMPI_SUCCESS;
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mca_io_ompio_data_t *data;
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mca_io_ompio_file_t *fh;
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2013-07-18 01:30:50 +04:00
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data = (mca_io_ompio_data_t *) fp->f_io_selected_data;
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fh = &data->ompio_fh;
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ret = ompio_io_ompio_file_write(fh,buf,count,datatype,status);
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return ret;
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}
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2014-08-15 00:17:58 +04:00
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int ompio_io_ompio_file_write (mca_io_ompio_file_t *fh,
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2015-09-03 04:33:45 +03:00
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const void *buf,
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2014-08-15 00:17:58 +04:00
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int count,
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struct ompi_datatype_t *datatype,
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ompi_status_public_t *status)
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2013-07-18 01:30:50 +04:00
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{
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int ret = OMPI_SUCCESS;
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2011-08-26 00:08:17 +04:00
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int index = 0;
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int cycles = 0;
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uint32_t iov_count = 0;
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struct iovec *decoded_iov = NULL;
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2014-08-15 00:17:58 +04:00
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size_t bytes_per_cycle=0;
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size_t total_bytes_written = 0;
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2015-06-24 06:59:57 +03:00
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size_t max_data=0, real_bytes_written=0;
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2014-09-12 22:01:30 +04:00
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ssize_t ret_code=0;
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2011-08-26 00:08:17 +04:00
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int i = 0; /* index into the decoded iovec of the buffer */
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2014-08-15 00:17:58 +04:00
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int j = 0; /* index into the file view iovec */
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2011-08-26 00:08:17 +04:00
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2013-05-31 01:33:13 +04:00
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if ( 0 == count ) {
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if ( MPI_STATUS_IGNORE != status ) {
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status->_ucount = 0;
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}
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return ret;
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}
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2015-06-24 06:59:57 +03:00
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ompi_io_ompio_decode_datatype (fh,
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datatype,
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count,
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buf,
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&max_data,
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&decoded_iov,
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2011-08-26 00:08:17 +04:00
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&iov_count);
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2015-08-07 21:06:39 +03:00
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if ( -1 == mca_io_ompio_cycle_buffer_size ) {
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bytes_per_cycle = max_data;
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}
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else {
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bytes_per_cycle = mca_io_ompio_cycle_buffer_size;
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}
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2011-08-26 00:08:17 +04:00
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cycles = ceil((float)max_data/bytes_per_cycle);
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#if 0
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2014-08-15 00:17:58 +04:00
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printf ("Bytes per Cycle: %d Cycles: %d\n", bytes_per_cycle, cycles);
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2011-08-26 00:08:17 +04:00
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#endif
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j = fh->f_index_in_file_view;
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for (index = 0; index < cycles; index++) {
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2015-06-24 06:59:57 +03:00
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mca_io_ompio_build_io_array ( fh,
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index,
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cycles,
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bytes_per_cycle,
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max_data,
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iov_count,
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decoded_iov,
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&i,
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&j,
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2014-08-15 00:17:58 +04:00
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&total_bytes_written);
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2011-08-26 00:08:17 +04:00
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if (fh->f_num_of_io_entries) {
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2014-09-07 19:14:57 +04:00
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ret_code =fh->f_fbtl->fbtl_pwritev (fh);
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if ( 0<= ret_code ) {
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2014-09-12 22:01:30 +04:00
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real_bytes_written+= (size_t)ret_code;
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2014-09-07 19:14:57 +04:00
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}
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2011-08-26 00:08:17 +04:00
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}
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fh->f_num_of_io_entries = 0;
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if (NULL != fh->f_io_array) {
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free (fh->f_io_array);
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fh->f_io_array = NULL;
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}
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}
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if (NULL != decoded_iov) {
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free (decoded_iov);
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decoded_iov = NULL;
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}
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2012-06-28 18:43:56 +04:00
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if ( MPI_STATUS_IGNORE != status ) {
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2014-09-07 19:14:57 +04:00
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status->_ucount = real_bytes_written;
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2012-06-28 18:43:56 +04:00
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}
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2011-08-26 00:08:17 +04:00
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return ret;
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}
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2014-08-15 00:17:58 +04:00
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int mca_io_ompio_file_write_at (ompi_file_t *fh,
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OMPI_MPI_OFFSET_TYPE offset,
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2015-09-03 04:33:45 +03:00
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const void *buf,
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2014-08-15 00:17:58 +04:00
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int count,
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struct ompi_datatype_t *datatype,
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ompi_status_public_t *status)
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2011-08-26 00:08:17 +04:00
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{
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int ret = OMPI_SUCCESS;
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mca_io_ompio_data_t *data;
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data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
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2013-07-18 01:30:50 +04:00
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ret = ompio_io_ompio_file_write_at (&data->ompio_fh, offset,buf,count,datatype,status);
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2014-08-15 00:17:58 +04:00
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2013-07-18 01:30:50 +04:00
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return ret;
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}
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2014-08-15 00:17:58 +04:00
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int ompio_io_ompio_file_write_at (mca_io_ompio_file_t *fh,
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OMPI_MPI_OFFSET_TYPE offset,
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2015-09-03 04:33:45 +03:00
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const void *buf,
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2014-08-15 00:17:58 +04:00
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int count,
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struct ompi_datatype_t *datatype,
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ompi_status_public_t *status)
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2013-07-18 01:30:50 +04:00
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{
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int ret = OMPI_SUCCESS;
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2014-08-15 05:49:43 +04:00
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OMPI_MPI_OFFSET_TYPE prev_offset;
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2014-08-15 18:03:29 +04:00
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ompio_io_ompio_file_get_position (fh, &prev_offset );
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2011-08-26 00:08:17 +04:00
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2014-08-15 00:17:58 +04:00
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ompi_io_ompio_set_explicit_offset (fh, offset);
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2013-07-18 01:30:50 +04:00
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ret = ompio_io_ompio_file_write (fh,
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buf,
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count,
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datatype,
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status);
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2014-08-15 05:49:43 +04:00
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// An explicit offset file operation is not suppsed to modify
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// the internal file pointer. So reset the pointer
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// to the previous value
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ompi_io_ompio_set_explicit_offset (fh, prev_offset );
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2011-08-26 00:08:17 +04:00
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return ret;
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}
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2014-08-15 00:17:58 +04:00
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int mca_io_ompio_file_iwrite (ompi_file_t *fp,
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2015-09-03 04:33:45 +03:00
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const void *buf,
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2014-08-15 00:17:58 +04:00
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int count,
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struct ompi_datatype_t *datatype,
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ompi_request_t **request)
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2011-08-26 00:08:17 +04:00
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{
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int ret = OMPI_SUCCESS;
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mca_io_ompio_data_t *data;
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2014-08-15 00:17:58 +04:00
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data = (mca_io_ompio_data_t *) fp->f_io_selected_data;
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ret = ompio_io_ompio_file_iwrite(&data->ompio_fh,buf,count,datatype,request);
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2012-07-12 14:26:27 +04:00
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2011-08-26 00:08:17 +04:00
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return ret;
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}
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2014-08-15 00:17:58 +04:00
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int ompio_io_ompio_file_iwrite (mca_io_ompio_file_t *fh,
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2015-09-03 04:33:45 +03:00
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const void *buf,
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2014-08-15 00:17:58 +04:00
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int count,
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struct ompi_datatype_t *datatype,
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ompi_request_t **request)
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2011-08-26 00:08:17 +04:00
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{
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int ret = OMPI_SUCCESS;
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2014-08-22 05:34:19 +04:00
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mca_ompio_request_t *ompio_req=NULL;
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ompio_req = OBJ_NEW(mca_ompio_request_t);
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ompio_req->req_type = MCA_OMPIO_REQUEST_WRITE;
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2015-07-27 20:43:45 +03:00
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ompio_req->req_ompi.req_state = OMPI_REQUEST_ACTIVE;
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2014-08-22 05:34:19 +04:00
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2015-07-16 00:05:52 +03:00
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if ( 0 == count ) {
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2014-08-22 05:34:19 +04:00
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ompi_request_complete (&ompio_req->req_ompi, 0);
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ompio_req->req_ompi.req_status.MPI_ERROR = OMPI_SUCCESS;
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ompio_req->req_ompi.req_status._ucount = 0;
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return OMPI_SUCCESS;
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}
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2011-08-26 00:08:17 +04:00
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2014-08-15 00:17:58 +04:00
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if ( NULL != fh->f_fbtl->fbtl_ipwritev ) {
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2014-08-22 05:34:19 +04:00
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/* This fbtl has support for non-blocking operations */
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2014-08-15 00:17:58 +04:00
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uint32_t iov_count = 0;
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struct iovec *decoded_iov = NULL;
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2015-06-24 06:59:57 +03:00
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size_t max_data = 0;
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2014-08-15 00:17:58 +04:00
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size_t total_bytes_written =0;
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int i = 0; /* index into the decoded iovec of the buffer */
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int j = 0; /* index into the file vie iovec */
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2015-06-24 06:59:57 +03:00
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ompi_io_ompio_decode_datatype (fh,
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datatype,
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count,
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buf,
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&max_data,
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&decoded_iov,
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2014-08-15 00:17:58 +04:00
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&iov_count);
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j = fh->f_index_in_file_view;
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/* Non blocking operations have to occur in a single cycle */
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2015-06-24 06:59:57 +03:00
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mca_io_ompio_build_io_array ( fh,
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2014-08-15 00:17:58 +04:00
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0, // index of current cycle iteration
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1, // number of cycles
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2015-06-24 06:59:57 +03:00
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max_data, // setting bytes_per_cycle to max_data
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max_data,
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iov_count,
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decoded_iov,
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&i,
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&j,
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2014-08-15 00:17:58 +04:00
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&total_bytes_written);
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2015-06-24 06:59:57 +03:00
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2014-08-15 00:17:58 +04:00
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if (fh->f_num_of_io_entries) {
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2014-09-24 01:27:57 +04:00
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fh->f_fbtl->fbtl_ipwritev (fh, (ompi_request_t *) ompio_req);
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}
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2015-06-24 06:59:57 +03:00
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2014-09-24 01:27:57 +04:00
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if ( false == mca_io_ompio_progress_is_registered ) {
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// Lazy initialization of progress function to minimize impact
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// on other ompi functionality in case its not used.
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opal_progress_register (mca_io_ompio_component_progress);
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mca_io_ompio_progress_is_registered=true;
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2014-08-15 00:17:58 +04:00
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}
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2015-06-24 06:59:57 +03:00
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2014-08-15 00:17:58 +04:00
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fh->f_num_of_io_entries = 0;
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if (NULL != fh->f_io_array) {
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free (fh->f_io_array);
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fh->f_io_array = NULL;
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}
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if (NULL != decoded_iov) {
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free (decoded_iov);
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decoded_iov = NULL;
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}
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}
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else {
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// This fbtl does not support non-blocking write operations
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2014-08-22 05:34:19 +04:00
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ompi_status_public_t status;
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ret = ompio_io_ompio_file_write(fh,buf,count,datatype, &status);
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2015-06-24 06:59:57 +03:00
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2014-08-22 05:34:19 +04:00
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|
|
ompi_request_complete (&ompio_req->req_ompi, 0);
|
|
|
|
ompio_req->req_ompi.req_status.MPI_ERROR = ret;
|
|
|
|
ompio_req->req_ompi.req_status._ucount = status._ucount;
|
2014-08-15 00:17:58 +04:00
|
|
|
}
|
2011-08-26 00:08:17 +04:00
|
|
|
|
2014-08-22 05:34:19 +04:00
|
|
|
*request = (ompi_request_t *) ompio_req;
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_iwrite_at (ompi_file_t *fh,
|
|
|
|
OMPI_MPI_OFFSET_TYPE offset,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_request_t **request)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
2015-06-24 06:59:57 +03:00
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
2014-08-15 00:17:58 +04:00
|
|
|
ret = ompio_io_ompio_file_iwrite_at(&data->ompio_fh,offset,buf,count,datatype,request);
|
2011-08-26 00:08:17 +04:00
|
|
|
|
2013-07-18 01:30:50 +04:00
|
|
|
return ret;
|
|
|
|
}
|
2011-08-26 00:08:17 +04:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int ompio_io_ompio_file_iwrite_at (mca_io_ompio_file_t *fh,
|
|
|
|
OMPI_MPI_OFFSET_TYPE offset,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_request_t **request)
|
2013-07-18 01:30:50 +04:00
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
2014-08-15 05:49:43 +04:00
|
|
|
OMPI_MPI_OFFSET_TYPE prev_offset;
|
2014-08-15 18:03:29 +04:00
|
|
|
ompio_io_ompio_file_get_position (fh, &prev_offset );
|
2012-07-12 14:26:27 +04:00
|
|
|
|
2013-07-18 01:30:50 +04:00
|
|
|
ompi_io_ompio_set_explicit_offset (fh, offset);
|
2014-08-15 00:17:58 +04:00
|
|
|
ret = ompio_io_ompio_file_iwrite (fh,
|
|
|
|
buf,
|
|
|
|
count,
|
|
|
|
datatype,
|
|
|
|
request);
|
2014-08-15 05:49:43 +04:00
|
|
|
|
|
|
|
/* An explicit offset file operation is not suppsed to modify
|
|
|
|
** the internal file pointer. So reset the pointer
|
|
|
|
** to the previous value
|
2015-06-24 06:59:57 +03:00
|
|
|
** It is OK to reset the position already here, althgouth
|
2014-08-15 05:49:43 +04:00
|
|
|
** the operation might still be pending/ongoing, since
|
2015-06-24 06:59:57 +03:00
|
|
|
** the entire array of <offset, length, memaddress> have
|
2014-08-15 05:49:43 +04:00
|
|
|
** already been constructed in the file_iwrite operation
|
|
|
|
*/
|
|
|
|
ompi_io_ompio_set_explicit_offset (fh, prev_offset);
|
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
/* Helper function used by both read and write operations */
|
|
|
|
/**************************************************************/
|
2011-08-26 00:08:17 +04:00
|
|
|
|
2015-06-24 06:59:57 +03:00
|
|
|
int mca_io_ompio_build_io_array ( mca_io_ompio_file_t *fh, int index, int cycles,
|
|
|
|
size_t bytes_per_cycle, int max_data, uint32_t iov_count,
|
|
|
|
struct iovec *decoded_iov, int *ii, int *jj, size_t *tbw )
|
2013-07-18 01:30:50 +04:00
|
|
|
{
|
2014-08-15 00:17:58 +04:00
|
|
|
OPAL_PTRDIFF_TYPE disp;
|
|
|
|
int block = 1;
|
|
|
|
size_t total_bytes_written = *tbw; /* total bytes that have been written*/
|
|
|
|
size_t bytes_to_write_in_cycle = 0; /* left to be written in a cycle*/
|
|
|
|
size_t sum_previous_counts = 0;
|
|
|
|
size_t sum_previous_length = 0;
|
|
|
|
int k = 0; /* index into the io_array */
|
|
|
|
int i = *ii;
|
|
|
|
int j = *jj;
|
2015-06-24 06:59:57 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
sum_previous_length = fh->f_position_in_file_view;
|
2013-07-18 01:30:50 +04:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
if ((index == cycles-1) && (max_data % bytes_per_cycle)) {
|
|
|
|
bytes_to_write_in_cycle = max_data % bytes_per_cycle;
|
|
|
|
}
|
|
|
|
else {
|
|
|
|
bytes_to_write_in_cycle = bytes_per_cycle;
|
|
|
|
}
|
2015-06-24 06:59:57 +03:00
|
|
|
|
|
|
|
fh->f_io_array = (mca_io_ompio_io_array_t *)malloc
|
2014-08-15 00:17:58 +04:00
|
|
|
(OMPIO_IOVEC_INITIAL_SIZE * sizeof (mca_io_ompio_io_array_t));
|
|
|
|
if (NULL == fh->f_io_array) {
|
|
|
|
opal_output(1, "OUT OF MEMORY\n");
|
|
|
|
return OMPI_ERR_OUT_OF_RESOURCE;
|
|
|
|
}
|
2015-06-24 06:59:57 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
while (bytes_to_write_in_cycle) {
|
|
|
|
/* reallocate if needed */
|
|
|
|
if (OMPIO_IOVEC_INITIAL_SIZE*block <= k) {
|
|
|
|
block ++;
|
2015-06-24 06:59:57 +03:00
|
|
|
fh->f_io_array = (mca_io_ompio_io_array_t *)realloc
|
|
|
|
(fh->f_io_array, OMPIO_IOVEC_INITIAL_SIZE *
|
2014-08-15 00:17:58 +04:00
|
|
|
block * sizeof (mca_io_ompio_io_array_t));
|
|
|
|
if (NULL == fh->f_io_array) {
|
|
|
|
opal_output(1, "OUT OF MEMORY\n");
|
|
|
|
return OMPI_ERR_OUT_OF_RESOURCE;
|
|
|
|
}
|
|
|
|
}
|
2015-06-24 06:59:57 +03:00
|
|
|
|
|
|
|
if (decoded_iov[i].iov_len -
|
2014-08-15 00:17:58 +04:00
|
|
|
(total_bytes_written - sum_previous_counts) <= 0) {
|
|
|
|
sum_previous_counts += decoded_iov[i].iov_len;
|
|
|
|
i = i + 1;
|
|
|
|
}
|
2015-06-24 06:59:57 +03:00
|
|
|
|
|
|
|
disp = (OPAL_PTRDIFF_TYPE)decoded_iov[i].iov_base +
|
2014-08-15 00:17:58 +04:00
|
|
|
(total_bytes_written - sum_previous_counts);
|
|
|
|
fh->f_io_array[k].memory_address = (IOVBASE_TYPE *)disp;
|
2015-06-24 06:59:57 +03:00
|
|
|
|
|
|
|
if (decoded_iov[i].iov_len -
|
|
|
|
(total_bytes_written - sum_previous_counts) >=
|
2014-08-15 00:17:58 +04:00
|
|
|
bytes_to_write_in_cycle) {
|
|
|
|
fh->f_io_array[k].length = bytes_to_write_in_cycle;
|
|
|
|
}
|
|
|
|
else {
|
2015-06-24 06:59:57 +03:00
|
|
|
fh->f_io_array[k].length = decoded_iov[i].iov_len -
|
2014-08-15 00:17:58 +04:00
|
|
|
(total_bytes_written - sum_previous_counts);
|
|
|
|
}
|
2015-06-24 06:59:57 +03:00
|
|
|
|
|
|
|
if (! (fh->f_flags & OMPIO_CONTIGUOUS_FVIEW)) {
|
|
|
|
if (fh->f_decoded_iov[j].iov_len -
|
2014-08-15 00:17:58 +04:00
|
|
|
(fh->f_total_bytes - sum_previous_length) <= 0) {
|
|
|
|
sum_previous_length += fh->f_decoded_iov[j].iov_len;
|
|
|
|
j = j + 1;
|
|
|
|
if (j == (int)fh->f_iov_count) {
|
|
|
|
j = 0;
|
|
|
|
sum_previous_length = 0;
|
|
|
|
fh->f_offset += fh->f_view_extent;
|
|
|
|
fh->f_position_in_file_view = sum_previous_length;
|
|
|
|
fh->f_index_in_file_view = j;
|
|
|
|
fh->f_total_bytes = 0;
|
|
|
|
}
|
|
|
|
}
|
2015-06-24 06:59:57 +03:00
|
|
|
}
|
|
|
|
|
|
|
|
disp = (OPAL_PTRDIFF_TYPE)fh->f_decoded_iov[j].iov_base +
|
2014-08-15 00:17:58 +04:00
|
|
|
(fh->f_total_bytes - sum_previous_length);
|
|
|
|
fh->f_io_array[k].offset = (IOVBASE_TYPE *)(intptr_t)(disp + fh->f_offset);
|
2015-06-24 06:59:57 +03:00
|
|
|
|
|
|
|
if (! (fh->f_flags & OMPIO_CONTIGUOUS_FVIEW)) {
|
|
|
|
if (fh->f_decoded_iov[j].iov_len -
|
|
|
|
(fh->f_total_bytes - sum_previous_length)
|
2014-08-15 00:17:58 +04:00
|
|
|
< fh->f_io_array[k].length) {
|
2015-06-24 06:59:57 +03:00
|
|
|
fh->f_io_array[k].length = fh->f_decoded_iov[j].iov_len -
|
2014-08-15 00:17:58 +04:00
|
|
|
(fh->f_total_bytes - sum_previous_length);
|
|
|
|
}
|
|
|
|
}
|
2015-06-24 06:59:57 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
total_bytes_written += fh->f_io_array[k].length;
|
|
|
|
fh->f_total_bytes += fh->f_io_array[k].length;
|
|
|
|
bytes_to_write_in_cycle -= fh->f_io_array[k].length;
|
|
|
|
k = k + 1;
|
|
|
|
}
|
|
|
|
fh->f_position_in_file_view = sum_previous_length;
|
|
|
|
fh->f_index_in_file_view = j;
|
|
|
|
fh->f_num_of_io_entries = k;
|
2015-06-24 06:59:57 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
#if 0
|
|
|
|
if (fh->f_rank == 0) {
|
|
|
|
int d;
|
|
|
|
printf("*************************** %d\n", fh->f_num_of_io_entries);
|
2015-06-24 06:59:57 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
for (d=0 ; d<fh->f_num_of_io_entries ; d++) {
|
|
|
|
printf(" ADDRESS: %p OFFSET: %p LENGTH: %d\n",
|
|
|
|
fh->f_io_array[d].memory_address,
|
|
|
|
fh->f_io_array[d].offset,
|
|
|
|
fh->f_io_array[d].length);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
#endif
|
|
|
|
*ii = i;
|
|
|
|
*jj = j;
|
|
|
|
*tbw = total_bytes_written;
|
2011-08-26 00:08:17 +04:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
return OMPI_SUCCESS;
|
2011-08-26 00:08:17 +04:00
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
/* Collective operations */
|
|
|
|
/******************************************************************/
|
|
|
|
|
|
|
|
int mca_io_ompio_file_write_all (ompi_file_t *fh,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_status_public_t *status)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
ret = data->ompio_fh.
|
2015-06-24 06:59:57 +03:00
|
|
|
f_fcoll->fcoll_file_write_all (&data->ompio_fh,
|
|
|
|
buf,
|
|
|
|
count,
|
2014-08-15 00:17:58 +04:00
|
|
|
datatype,
|
|
|
|
status);
|
2015-06-24 06:59:57 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
if ( MPI_STATUS_IGNORE != status ) {
|
|
|
|
size_t size;
|
2013-07-18 01:30:50 +04:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
opal_datatype_type_size (&datatype->super, &size);
|
|
|
|
status->_ucount = count * size;
|
|
|
|
}
|
2011-08-26 00:08:17 +04:00
|
|
|
|
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_write_at_all (ompi_file_t *fh,
|
|
|
|
OMPI_MPI_OFFSET_TYPE offset,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_status_public_t *status)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
2013-07-18 01:30:50 +04:00
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
2014-08-15 00:17:58 +04:00
|
|
|
ret = ompio_io_ompio_file_write_at_all(&data->ompio_fh,offset,buf,count,datatype,status);
|
2013-07-18 01:30:50 +04:00
|
|
|
|
|
|
|
return ret;
|
|
|
|
}
|
2011-08-26 00:08:17 +04:00
|
|
|
|
2015-06-18 13:17:33 +03:00
|
|
|
int mca_io_ompio_file_iwrite_all (ompi_file_t *fh,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2015-06-18 13:17:33 +03:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_request_t **request)
|
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data=NULL;
|
|
|
|
mca_io_ompio_file_t *fp=NULL;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
|
|
|
fp = &data->ompio_fh;
|
|
|
|
|
|
|
|
if ( NULL != fp->f_fcoll->fcoll_file_iwrite_all ) {
|
2015-06-24 06:59:57 +03:00
|
|
|
ret = fp->f_fcoll->fcoll_file_iwrite_all (&data->ompio_fh,
|
|
|
|
buf,
|
|
|
|
count,
|
2015-06-18 13:17:33 +03:00
|
|
|
datatype,
|
|
|
|
request);
|
|
|
|
}
|
|
|
|
else {
|
2015-06-24 06:59:57 +03:00
|
|
|
/* this fcoll component does not support non-blocking
|
|
|
|
collective I/O operations. WE fake it with
|
2015-06-18 13:17:33 +03:00
|
|
|
individual non-blocking I/O operations. */
|
|
|
|
ret = ompio_io_ompio_file_iwrite ( fp, buf, count, datatype, request );
|
|
|
|
}
|
|
|
|
|
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int ompio_io_ompio_file_write_at_all (mca_io_ompio_file_t *fh,
|
|
|
|
OMPI_MPI_OFFSET_TYPE offset,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_status_public_t *status)
|
2013-07-18 01:30:50 +04:00
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
2014-08-15 18:03:29 +04:00
|
|
|
OMPI_MPI_OFFSET_TYPE prev_offset;
|
|
|
|
ompio_io_ompio_file_get_position (fh, &prev_offset );
|
2013-07-18 01:30:50 +04:00
|
|
|
|
|
|
|
ompi_io_ompio_set_explicit_offset (fh, offset);
|
2014-08-15 00:17:58 +04:00
|
|
|
ret = fh->f_fcoll->fcoll_file_write_all (fh,
|
|
|
|
buf,
|
|
|
|
count,
|
|
|
|
datatype,
|
|
|
|
status);
|
2014-08-15 18:03:29 +04:00
|
|
|
|
|
|
|
ompi_io_ompio_set_explicit_offset (fh, prev_offset);
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2015-06-18 13:17:33 +03:00
|
|
|
int mca_io_ompio_file_iwrite_at_all (ompi_file_t *fh,
|
|
|
|
OMPI_MPI_OFFSET_TYPE offset,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2015-06-18 13:17:33 +03:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_request_t **request)
|
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
2015-07-16 00:05:52 +03:00
|
|
|
ret = ompio_io_ompio_file_iwrite_at_all ( &data->ompio_fh, offset, buf, count, datatype, request );
|
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
|
|
|
int ompio_io_ompio_file_iwrite_at_all (mca_io_ompio_file_t *fp,
|
|
|
|
OMPI_MPI_OFFSET_TYPE offset,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2015-07-16 00:05:52 +03:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_request_t **request)
|
|
|
|
{
|
|
|
|
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
OMPI_MPI_OFFSET_TYPE prev_offset;
|
|
|
|
|
2015-06-18 13:56:51 +03:00
|
|
|
ompio_io_ompio_file_get_position (fp, &prev_offset );
|
|
|
|
|
|
|
|
ompi_io_ompio_set_explicit_offset (fp, offset);
|
|
|
|
|
2015-06-18 13:17:33 +03:00
|
|
|
if ( NULL != fp->f_fcoll->fcoll_file_iwrite_all ) {
|
2015-07-16 00:05:52 +03:00
|
|
|
ret = fp->f_fcoll->fcoll_file_iwrite_all (fp,
|
2015-06-24 06:59:57 +03:00
|
|
|
buf,
|
|
|
|
count,
|
2015-06-18 13:17:33 +03:00
|
|
|
datatype,
|
|
|
|
request);
|
|
|
|
}
|
|
|
|
else {
|
2015-06-24 06:59:57 +03:00
|
|
|
/* this fcoll component does not support non-blocking
|
|
|
|
collective I/O operations. WE fake it with
|
2015-06-18 13:17:33 +03:00
|
|
|
individual non-blocking I/O operations. */
|
|
|
|
ret = ompio_io_ompio_file_iwrite ( fp, buf, count, datatype, request );
|
|
|
|
}
|
|
|
|
|
2015-06-18 13:56:51 +03:00
|
|
|
ompi_io_ompio_set_explicit_offset (fp, prev_offset);
|
2015-06-18 13:17:33 +03:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
|
2015-07-16 00:05:52 +03:00
|
|
|
|
|
|
|
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
/* Infrastructure for shared file pointer operations */
|
|
|
|
/* (Individual and collective */
|
|
|
|
/******************************************************/
|
|
|
|
|
|
|
|
int mca_io_ompio_file_write_shared (ompi_file_t *fp,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_status_public_t * status)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
2013-07-18 01:30:50 +04:00
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
mca_io_ompio_file_t *fh;
|
|
|
|
mca_sharedfp_base_module_t * shared_fp_base_module;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fp->f_io_selected_data;
|
|
|
|
fh = &data->ompio_fh;
|
|
|
|
|
|
|
|
/*get the shared fp module associated with this file*/
|
|
|
|
shared_fp_base_module = fh->f_sharedfp;
|
2014-09-13 01:15:58 +04:00
|
|
|
if ( NULL == shared_fp_base_module ){
|
|
|
|
opal_output(0, "No shared file pointer component found for this communicator. Can not execute\n");
|
|
|
|
return OMPI_ERROR;
|
|
|
|
}
|
2013-07-18 01:30:50 +04:00
|
|
|
ret = shared_fp_base_module->sharedfp_write(fh,buf,count,datatype,status);
|
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_iwrite_shared (ompi_file_t *fp,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_request_t **request)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
2013-07-18 01:30:50 +04:00
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
mca_io_ompio_file_t *fh;
|
|
|
|
mca_sharedfp_base_module_t * shared_fp_base_module;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fp->f_io_selected_data;
|
|
|
|
fh = &data->ompio_fh;
|
|
|
|
|
|
|
|
/*get the shared fp module associated with this file*/
|
|
|
|
shared_fp_base_module = fh->f_sharedfp;
|
2014-09-13 01:15:58 +04:00
|
|
|
if ( NULL == shared_fp_base_module ){
|
|
|
|
opal_output(0, "No shared file pointer component found for this communicator. Can not execute\n");
|
|
|
|
return OMPI_ERROR;
|
|
|
|
}
|
2013-07-18 01:30:50 +04:00
|
|
|
ret = shared_fp_base_module->sharedfp_iwrite(fh,buf,count,datatype,request);
|
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_write_ordered (ompi_file_t *fp,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype,
|
|
|
|
ompi_status_public_t * status)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
2013-07-18 01:30:50 +04:00
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
mca_io_ompio_file_t *fh;
|
|
|
|
mca_sharedfp_base_module_t * shared_fp_base_module;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fp->f_io_selected_data;
|
|
|
|
fh = &data->ompio_fh;
|
|
|
|
|
|
|
|
/*get the shared fp module associated with this file*/
|
|
|
|
shared_fp_base_module = fh->f_sharedfp;
|
2014-09-13 01:15:58 +04:00
|
|
|
if ( NULL == shared_fp_base_module ){
|
|
|
|
opal_output(0,"No shared file pointer component found for this communicator. Can not execute\n");
|
|
|
|
return OMPI_ERROR;
|
|
|
|
}
|
2013-07-18 01:30:50 +04:00
|
|
|
ret = shared_fp_base_module->sharedfp_write_ordered(fh,buf,count,datatype,status);
|
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_write_ordered_begin (ompi_file_t *fp,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
2013-07-18 01:30:50 +04:00
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
mca_io_ompio_file_t *fh;
|
|
|
|
mca_sharedfp_base_module_t * shared_fp_base_module;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fp->f_io_selected_data;
|
|
|
|
fh = &data->ompio_fh;
|
|
|
|
|
|
|
|
/*get the shared fp module associated with this file*/
|
|
|
|
shared_fp_base_module = fh->f_sharedfp;
|
2014-09-13 01:15:58 +04:00
|
|
|
if ( NULL == shared_fp_base_module ){
|
|
|
|
opal_output(0, "No shared file pointer component found for this communicator. Can not execute\n");
|
|
|
|
return OMPI_ERROR;
|
|
|
|
}
|
2013-07-18 01:30:50 +04:00
|
|
|
ret = shared_fp_base_module->sharedfp_write_ordered_begin(fh,buf,count,datatype);
|
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_write_ordered_end (ompi_file_t *fp,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
ompi_status_public_t *status)
|
2011-08-26 00:08:17 +04:00
|
|
|
{
|
2013-07-18 01:30:50 +04:00
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
mca_io_ompio_file_t *fh;
|
|
|
|
mca_sharedfp_base_module_t * shared_fp_base_module;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fp->f_io_selected_data;
|
|
|
|
fh = &data->ompio_fh;
|
|
|
|
|
|
|
|
/*get the shared fp module associated with this file*/
|
|
|
|
shared_fp_base_module = fh->f_sharedfp;
|
2014-09-13 01:15:58 +04:00
|
|
|
if ( NULL == shared_fp_base_module ){
|
|
|
|
opal_output(0, "No shared file pointer component found for this communicator. Can not execute\n");
|
|
|
|
return OMPI_ERROR;
|
|
|
|
}
|
2013-07-18 01:30:50 +04:00
|
|
|
ret = shared_fp_base_module->sharedfp_write_ordered_end(fh,buf,status);
|
|
|
|
|
2011-08-26 00:08:17 +04:00
|
|
|
return ret;
|
|
|
|
}
|
2014-08-15 00:17:58 +04:00
|
|
|
|
|
|
|
|
|
|
|
/* Split collectives . Not really used but infrastructure is in place */
|
|
|
|
/**********************************************************************/
|
2015-06-18 14:22:41 +03:00
|
|
|
int mca_io_ompio_file_write_all_begin (ompi_file_t *fh,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2015-06-18 14:22:41 +03:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype)
|
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_file_t *fp;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
|
|
|
fp = &data->ompio_fh;
|
|
|
|
if ( true == fp->f_split_coll_in_use ) {
|
|
|
|
printf("Only one split collective I/O operation allowed per file handle at any given point in time!\n");
|
|
|
|
return MPI_ERR_OTHER;
|
|
|
|
}
|
|
|
|
ret = mca_io_ompio_file_iwrite_all ( fh, buf, count, datatype, &fp->f_split_coll_req );
|
|
|
|
fp->f_split_coll_in_use = true;
|
|
|
|
|
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
|
|
|
int mca_io_ompio_file_write_all_end (ompi_file_t *fh,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2015-06-18 14:22:41 +03:00
|
|
|
ompi_status_public_t *status)
|
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_file_t *fp;
|
|
|
|
mca_io_ompio_data_t *data;
|
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
|
|
|
fp = &data->ompio_fh;
|
|
|
|
ret = ompi_request_wait ( &fp->f_split_coll_req, status );
|
|
|
|
|
|
|
|
/* remove the flag again */
|
|
|
|
fp->f_split_coll_in_use = false;
|
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_write_at_all_begin (ompi_file_t *fh,
|
|
|
|
OMPI_MPI_OFFSET_TYPE offset,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
int count,
|
|
|
|
struct ompi_datatype_t *datatype)
|
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
2015-07-16 00:05:52 +03:00
|
|
|
mca_io_ompio_data_t *data=NULL;
|
|
|
|
mca_io_ompio_file_t *fp=NULL;
|
2014-08-15 00:17:58 +04:00
|
|
|
|
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
2015-07-16 00:05:52 +03:00
|
|
|
fp = &data->ompio_fh;
|
2014-08-15 00:17:58 +04:00
|
|
|
|
2015-07-16 00:05:52 +03:00
|
|
|
if ( true == fp->f_split_coll_in_use ) {
|
2015-06-18 14:22:41 +03:00
|
|
|
printf("Only one split collective I/O operation allowed per file handle at any given point in time!\n");
|
|
|
|
return MPI_ERR_REQUEST;
|
|
|
|
}
|
2015-07-16 00:05:52 +03:00
|
|
|
ret = ompio_io_ompio_file_iwrite_at_all ( fp, offset, buf, count, datatype, &fp->f_split_coll_req );
|
|
|
|
fp->f_split_coll_in_use = true;
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
return ret;
|
|
|
|
}
|
|
|
|
|
2015-07-16 00:05:52 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
int mca_io_ompio_file_write_at_all_end (ompi_file_t *fh,
|
2015-09-03 04:33:45 +03:00
|
|
|
const void *buf,
|
2014-08-15 00:17:58 +04:00
|
|
|
ompi_status_public_t * status)
|
|
|
|
{
|
|
|
|
int ret = OMPI_SUCCESS;
|
|
|
|
mca_io_ompio_data_t *data;
|
2015-07-16 00:05:52 +03:00
|
|
|
mca_io_ompio_file_t *fp=NULL;
|
2015-08-24 18:32:33 +03:00
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
data = (mca_io_ompio_data_t *) fh->f_io_selected_data;
|
2015-07-16 00:05:52 +03:00
|
|
|
fp = &data->ompio_fh;
|
|
|
|
ret = ompi_request_wait ( &fp->f_split_coll_req, status );
|
2014-08-15 00:17:58 +04:00
|
|
|
|
2015-06-18 14:22:41 +03:00
|
|
|
/* remove the flag again */
|
2015-07-16 00:05:52 +03:00
|
|
|
fp->f_split_coll_in_use = false;
|
|
|
|
|
2014-08-15 00:17:58 +04:00
|
|
|
return ret;
|
|
|
|
}
|